RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 IGKCP01834 107 aa11.22□□□□□ -0.61
TRAM1-203ENST00000520700 CXCL5P42830 114 aa11.22□□□□□ -0.61
TRAM1-203ENST00000520700 COX7B2Q8TF08 81 aa11.22□□□□□ -0.61
TRAM1-203ENST00000520700 PKIGQ9Y2B9 76 aa11.22□□□□□ -0.61
TRAM1-203ENST00000520700 TOMM7Q9P0U1 55 aa11.21□□□□□ -0.61
TRAM1-203ENST00000520700 TRBV30A0A0K0K1B3 111 aa11.2□□□□□ -0.62
TRAM1-203ENST00000520700 AKR1D1P51857 326 aa11.2□□□□□ -0.62
TRAM1-203ENST00000520700 KRTDAPP60985 99 aa11.2□□□□□ -0.62
TRAM1-203ENST00000520700 UNQ6190/PRO20217Q6UXQ8 127 aa11.2□□□□□ -0.62
TRAM1-203ENST00000520700 Q6ZSA8 131 aa11.2□□□□□ -0.62
TRAM1-203ENST00000520700 CKS1BP61024 79 aa11.19□□□□□ -0.62
TRAM1-203ENST00000520700 C10orf25Q5T742 122 aa11.19□□□□□ -0.62
TRAM1-203ENST00000520700 PMCHL2Q9BQD1 86 aa11.19□□□□□ -0.62
TRAM1-203ENST00000520700 LINC01620Q4KN68 170 aa11.18□□□□□ -0.62
TRAM1-203ENST00000520700 C2orf82Q6UX34 121 aa11.18□□□□□ -0.62
TRAM1-203ENST00000520700 APOBP04114 4563 aaKnown RBP11.18□□□□□ -0.62
TRAM1-203ENST00000520700 C20orf202A1L168 122 aa11.17□□□□□ -0.62
TRAM1-203ENST00000520700 TLX1NBP0CAT3 122 aa11.17□□□□□ -0.62
TRAM1-203ENST00000520700 SFTA2Q6UW10 78 aa11.17□□□□□ -0.62
TRAM1-203ENST00000520700 C6orf48Q9UBA6 75 aa11.17□□□□□ -0.62
TRAM1-203ENST00000520700 RYR1P21817 5038 aa11.17□□□□□ -0.62
TRAM1-203ENST00000520700 KIAA1109Q2LD37 5005 aa11.16□□□□□ -0.62
TRAM1-203ENST00000520700 CDK2AP2O75956 126 aa11.16□□□□□ -0.62
TRAM1-203ENST00000520700 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
TRAM1-203ENST00000520700 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.62
TRAM1-203ENST00000520700 HERVK_113P61574 105 aa11.15□□□□□ -0.62
TRAM1-203ENST00000520700 PLEKHB2Q96CS7 222 aa11.14□□□□□ -0.63
TRAM1-203ENST00000520700 FAM30AQ9NZY2 134 aa11.14□□□□□ -0.63
TRAM1-203ENST00000520700 LEPROTO15243 131 aa11.13□□□□□ -0.63
TRAM1-203ENST00000520700 ZNF625Q96I27 306 aaPredicted RBP11.13□□□□□ -0.63
TRAM1-203ENST00000520700 LINC00474Q9P2X8 69 aa11.13□□□□□ -0.63
TRAM1-203ENST00000520700 E9PLD3 99 aa11.11□□□□□ -0.63
TRAM1-203ENST00000520700 NDUFC2-KCTD14E9PQ53 114 aa11.11□□□□□ -0.63
TRAM1-203ENST00000520700 XGP55808 180 aa11.11□□□□□ -0.63
TRAM1-203ENST00000520700 PTTG1IPP53801 180 aa11.1□□□□□ -0.63
TRAM1-203ENST00000520700 SPACA4Q8TDM5 124 aa11.1□□□□□ -0.63
TRAM1-203ENST00000520700 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.1□□□□□ -0.63
TRAM1-203ENST00000520700 A0A096LNI7 61 aa11.09□□□□□ -0.63
TRAM1-203ENST00000520700 J3QQQ9 107 aa11.09□□□□□ -0.63
TRAM1-203ENST00000520700 PANO1I0J062 215 aa11.08□□□□□ -0.64
TRAM1-203ENST00000520700 NMUP48645 174 aa11.08□□□□□ -0.64
TRAM1-203ENST00000520700 HERV-K104P63124 156 aa11.08□□□□□ -0.64
TRAM1-203ENST00000520700 COX17Q14061 63 aa11.08□□□□□ -0.64
TRAM1-203ENST00000520700 C9orf116Q5BN46 136 aaPredicted RBP11.08□□□□□ -0.64
TRAM1-203ENST00000520700 Q6ZRP5 223 aa11.08□□□□□ -0.64
TRAM1-203ENST00000520700 STPG4Q8N801 248 aa11.08□□□□□ -0.64
TRAM1-203ENST00000520700 TMA7Q9Y2S6 64 aaKnown RBP11.08□□□□□ -0.64
TRAM1-203ENST00000520700 MYMXA0A1B0GTQ4 84 aa11.07□□□□□ -0.64
TRAM1-203ENST00000520700 EPM2AB3EWF7 344 aa11.07□□□□□ -0.64
TRAM1-203ENST00000520700 TSPEAR-AS2P59090 65 aa11.07□□□□□ -0.64
TRAM1-203ENST00000520700 NDUFA12Q9UI09 145 aa11.07□□□□□ -0.64
TRAM1-203ENST00000520700 CHTF8P0CG12 524 aa11.06□□□□□ -0.64
TRAM1-203ENST00000520700 GAGE2BQ13066 116 aa11.06□□□□□ -0.64
TRAM1-203ENST00000520700 LINC00587B1AMM8 73 aa11.05□□□□□ -0.64
TRAM1-203ENST00000520700 LGALS3P17931 250 aaKnown RBP11.05□□□□□ -0.64
TRAM1-203ENST00000520700 RPL18AQ02543 176 aaKnown RBP11.05□□□□□ -0.64
TRAM1-203ENST00000520700 CIRBP-AS1Q8TBR5 109 aa11.05□□□□□ -0.64
TRAM1-203ENST00000520700 PLAC8Q9NZF1 115 aa11.05□□□□□ -0.64
TRAM1-203ENST00000520700 ERG28Q9UKR5 140 aa11.05□□□□□ -0.64
TRAM1-203ENST00000520700 HSPG2P98160 4391 aa11.05□□□□□ -0.64
TRAM1-203ENST00000520700 IGKV2-24A0A0C4DH68 120 aa11.04□□□□□ -0.64
TRAM1-203ENST00000520700 MAJINQ3KP22 176 aa11.04□□□□□ -0.64
TRAM1-203ENST00000520700 SCXQ7RTU7 201 aa11.04□□□□□ -0.64
TRAM1-203ENST00000520700 A0A087WYN8 130 aa11.03□□□□□ -0.64
TRAM1-203ENST00000520700 HERC2O95714 4834 aa11.03□□□□□ -0.64
TRAM1-203ENST00000520700 SCGB1D1O95968 90 aa11.02□□□□□ -0.65
TRAM1-203ENST00000520700 ATOH7Q8N100 152 aa11.02□□□□□ -0.65
TRAM1-203ENST00000520700 DPH3Q96FX2 82 aa11.02□□□□□ -0.65
TRAM1-203ENST00000520700 IGKV2D-26A0A0A0MRZ7 120 aa11.01□□□□□ -0.65
TRAM1-203ENST00000520700 JOSD1Q15040 202 aaPredicted RBP11.01□□□□□ -0.65
TRAM1-203ENST00000520700 GAGE2EQ4V326 116 aa11.01□□□□□ -0.65
TRAM1-203ENST00000520700 GAGE2DQ9UEU5 116 aa11.01□□□□□ -0.65
TRAM1-203ENST00000520700 ANKRD39Q53RE8 183 aa11□□□□□ -0.65
TRAM1-203ENST00000520700 C9orf129Q5T035 196 aaKnown RBP11□□□□□ -0.65
TRAM1-203ENST00000520700 PFN2P35080 140 aa10.99□□□□□ -0.65
TRAM1-203ENST00000520700 A0A1W2PNN7 141 aa10.98□□□□□ -0.65
TRAM1-203ENST00000520700 HSBP1L1C9JCN9 74 aa10.98□□□□□ -0.65
TRAM1-203ENST00000520700 PLA2G2DQ9UNK4 145 aa10.98□□□□□ -0.65
TRAM1-203ENST00000520700 LINC00158P58513 81 aa10.97□□□□□ -0.65
TRAM1-203ENST00000520700 FAT1Q14517 4588 aa10.97□□□□□ -0.65
TRAM1-203ENST00000520700 A0A0J9YXY3 114 aa10.96□□□□□ -0.65
TRAM1-203ENST00000520700 SMIM13P0DJ93 91 aa10.96□□□□□ -0.65
TRAM1-203ENST00000520700 HAMPP81172 84 aa10.96□□□□□ -0.65
TRAM1-203ENST00000520700 MEIG1Q5JSS6 88 aa10.96□□□□□ -0.65
TRAM1-203ENST00000520700 XAGE1AQ9HD64 81 aa10.96□□□□□ -0.65
TRAM1-203ENST00000520700 SND1-IT1Q9HBX3 110 aa10.95□□□□□ -0.66
TRAM1-203ENST00000520700 ZNF815PA8K554 130 aa10.94□□□□□ -0.66
TRAM1-203ENST00000520700 TIMM17BO60830 172 aa10.94□□□□□ -0.66
TRAM1-203ENST00000520700 KRTAP7-1Q8IUC3 87 aa10.94□□□□□ -0.66
TRAM1-203ENST00000520700 LOC107984156A0A0G2JMH3 177 aa10.93□□□□□ -0.66
TRAM1-203ENST00000520700 ARL17AQ8IVW1 177 aa10.93□□□□□ -0.66
TRAM1-203ENST00000520700 Q8N1X5 172 aa10.93□□□□□ -0.66
TRAM1-203ENST00000520700 TTTY13Q9BZ97 58 aa10.93□□□□□ -0.66
TRAM1-203ENST00000520700 IGLV5-37A0A075B6J1 123 aa10.92□□□□□ -0.66
TRAM1-203ENST00000520700 FAM168BA1KXE4 195 aa10.92□□□□□ -0.66
TRAM1-203ENST00000520700 PYY3Q5JQD4 70 aa10.92□□□□□ -0.66
TRAM1-203ENST00000520700 MIR7-3HGQ8N6C7 128 aa10.92□□□□□ -0.66
TRAM1-203ENST00000520700 PCP2Q8IVA1 136 aa10.91□□□□□ -0.66
TRAM1-203ENST00000520700 TP73-AS1Q9UF72 201 aa10.91□□□□□ -0.66
TRAM1-203ENST00000520700 A0A0U1RRA0 63 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms