RNA–Protein interactions for RNA: ENST00000520592.1

CDKL3-204, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 3

Gene CDKL3, Length 652 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-204ENST00000520592 SFTA2Q6UW10 78 aa-0.81□□□□□ -2.54
CDKL3-204ENST00000520592 LCN9Q8WX39 176 aa-0.81□□□□□ -2.54
CDKL3-204ENST00000520592 FAM167A-AS1Q96KT0 104 aa-0.81□□□□□ -2.54
CDKL3-204ENST00000520592 MANBALQ9NQG1 85 aa-0.81□□□□□ -2.54
CDKL3-204ENST00000520592 USP9XQ93008 2570 aaPredicted RBP-0.81□□□□□ -2.54
CDKL3-204ENST00000520592 EPG5Q9HCE0 2579 aa-0.82□□□□□ -2.54
CDKL3-204ENST00000520592 ARHGEF5Q12774 1597 aa-0.82□□□□□ -2.54
CDKL3-204ENST00000520592 A0A1B0GWA3 101 aa-0.82□□□□□ -2.54
CDKL3-204ENST00000520592 TET3O43151 1660 aa-0.82□□□□□ -2.54
CDKL3-204ENST00000520592 MBD5Q9P267 1494 aa-0.83□□□□□ -2.54
CDKL3-204ENST00000520592 UBE2L5PA0A1B0GUS4 154 aa-0.83□□□□□ -2.54
CDKL3-204ENST00000520592 AKAIN1P0CW23 69 aa-0.83□□□□□ -2.54
CDKL3-204ENST00000520592 TRAPPC2P0DI81 140 aa-0.83□□□□□ -2.54
CDKL3-204ENST00000520592 TRAPPC2BP0DI82 140 aa-0.83□□□□□ -2.54
CDKL3-204ENST00000520592 SEC11AP67812 179 aa-0.83□□□□□ -2.54
CDKL3-204ENST00000520592 UBE2L3P68036 154 aaKnown RBP-0.83□□□□□ -2.54
CDKL3-204ENST00000520592 C9orf153Q5TBE3 101 aa-0.83□□□□□ -2.54
CDKL3-204ENST00000520592 TSC22D3Q99576 134 aa-0.83□□□□□ -2.54
CDKL3-204ENST00000520592 HECTD1Q9ULT8 2610 aa-0.83□□□□□ -2.54
CDKL3-204ENST00000520592 SMG6Q86US8 1419 aaKnown RBP-0.83□□□□□ -2.54
CDKL3-204ENST00000520592 ANKRD36A6QL64 1941 aa-0.83□□□□□ -2.54
CDKL3-204ENST00000520592 PKHD1P08F94 4074 aa-0.84□□□□□ -2.54
CDKL3-204ENST00000520592 NBASA2RRP1 2371 aa-0.84□□□□□ -2.54
CDKL3-204ENST00000520592 PAPPA2Q9BXP8 1791 aa-0.84□□□□□ -2.54
CDKL3-204ENST00000520592 ZFHX3Q15911 3703 aa-0.84□□□□□ -2.54
CDKL3-204ENST00000520592 KTN1Q86UP2 1357 aaKnown RBP-0.84□□□□□ -2.54
CDKL3-204ENST00000520592 USP9YO00507 2555 aaPredicted RBP-0.85□□□□□ -2.54
CDKL3-204ENST00000520592 C1orf167Q5SNV9 1468 aa-0.85□□□□□ -2.55
CDKL3-204ENST00000520592 FAM24AA6NFZ4 105 aa-0.85□□□□□ -2.55
CDKL3-204ENST00000520592 FAM223BA6NKX1 122 aa-0.85□□□□□ -2.55
CDKL3-204ENST00000520592 F6UZH7 168 aa-0.85□□□□□ -2.55
CDKL3-204ENST00000520592 Q0VG73 95 aa-0.85□□□□□ -2.55
CDKL3-204ENST00000520592 FAM107BQ9H098 131 aa-0.85□□□□□ -2.55
CDKL3-204ENST00000520592 DPH3P1Q9H4G8 78 aa-0.85□□□□□ -2.55
CDKL3-204ENST00000520592 CRIPTQ9P021 101 aa-0.85□□□□□ -2.55
CDKL3-204ENST00000520592 WDR87Q6ZQQ6 2873 aa-0.85□□□□□ -2.55
CDKL3-204ENST00000520592 SHROOM2Q13796 1616 aa-0.86□□□□□ -2.55
CDKL3-204ENST00000520592 ITPR3Q14573 2671 aa-0.86□□□□□ -2.55
CDKL3-204ENST00000520592 SNAPC5O75971 98 aa-0.86□□□□□ -2.55
CDKL3-204ENST00000520592 H1FX-AS1Q4G0G2 97 aa-0.86□□□□□ -2.55
CDKL3-204ENST00000520592 PP6455Q8WZ26 134 aa-0.86□□□□□ -2.55
CDKL3-204ENST00000520592 KNL1Q8NG31 2342 aa-0.86□□□□□ -2.55
CDKL3-204ENST00000520592 A0A0G2JMZ2 1700 aa-0.86□□□□□ -2.55
CDKL3-204ENST00000520592 TNRC18O15417 2968 aaPredicted RBP-0.87□□□□□ -2.55
CDKL3-204ENST00000520592 SCN7AQ01118 1682 aa-0.87□□□□□ -2.55
CDKL3-204ENST00000520592 EHBP1L1Q8N3D4 1523 aa-0.87□□□□□ -2.55
CDKL3-204ENST00000520592 COX6CP09669 75 aa-0.87□□□□□ -2.55
CDKL3-204ENST00000520592 C12orf57Q99622 126 aa-0.87□□□□□ -2.55
CDKL3-204ENST00000520592 XRN1Q8IZH2 1706 aaKnown RBP-0.87□□□□□ -2.55
CDKL3-204ENST00000520592 MARF1Q9Y4F3 1742 aaKnown RBP-0.87□□□□□ -2.55
CDKL3-204ENST00000520592 NUP188Q5SRE5 1749 aa-0.88□□□□□ -2.55
CDKL3-204ENST00000520592 A0A1B0GU69 56 aa-0.88□□□□□ -2.55
CDKL3-204ENST00000520592 I3L3M4 83 aa-0.88□□□□□ -2.55
CDKL3-204ENST00000520592 K7EP13 123 aa-0.88□□□□□ -2.55
CDKL3-204ENST00000520592 ATP5EP56381 51 aaPredicted RBP-0.88□□□□□ -2.55
CDKL3-204ENST00000520592 DEFB112Q30KQ8 113 aa-0.88□□□□□ -2.55
CDKL3-204ENST00000520592 PRO1854Q9UHT4 67 aa-0.88□□□□□ -2.55
CDKL3-204ENST00000520592 ADGRL2O95490 1459 aa-0.88□□□□□ -2.55
CDKL3-204ENST00000520592 QRICH2Q9H0J4 1663 aa-0.88□□□□□ -2.55
CDKL3-204ENST00000520592 SCAPERQ9BY12 1400 aa-0.89□□□□□ -2.55
CDKL3-204ENST00000520592 SPG11Q96JI7 2443 aa-0.89□□□□□ -2.55
CDKL3-204ENST00000520592 UBE2D3P61077 147 aa-0.89□□□□□ -2.55
CDKL3-204ENST00000520592 UBE2D2P62837 147 aa-0.89□□□□□ -2.55
CDKL3-204ENST00000520592 C9orf62Q8N4C0 152 aa-0.89□□□□□ -2.55
CDKL3-204ENST00000520592 SPRR2FQ96RM1 72 aa-0.89□□□□□ -2.55
CDKL3-204ENST00000520592 CCDC141Q6ZP82 1450 aa-0.89□□□□□ -2.55
CDKL3-204ENST00000520592 NLRP1Q9C000 1473 aa-0.89□□□□□ -2.55
CDKL3-204ENST00000520592 RIF1Q5UIP0 2472 aaKnown RBP-0.89□□□□□ -2.55
CDKL3-204ENST00000520592 A2ML1A8K2U0 1454 aa-0.9□□□□□ -2.55
CDKL3-204ENST00000520592 PLEKHH2Q8IVE3 1493 aa-0.9□□□□□ -2.55
CDKL3-204ENST00000520592 NAP1L6A6NFF2 107 aa-0.9□□□□□ -2.55
CDKL3-204ENST00000520592 SAA2P0DJI9 122 aaPredicted RBP-0.9□□□□□ -2.55
CDKL3-204ENST00000520592 C1orf54Q8WWF1 131 aa-0.9□□□□□ -2.55
CDKL3-204ENST00000520592 LINC00846Q9NV44 126 aa-0.9□□□□□ -2.55
CDKL3-204ENST00000520592 FASNP49327 2511 aaKnown RBP-0.9□□□□□ -2.55
CDKL3-204ENST00000520592 ROCK2O75116 1388 aaKnown RBP-0.91□□□□□ -2.55
CDKL3-204ENST00000520592 S100A12P80511 92 aa-0.91□□□□□ -2.56
CDKL3-204ENST00000520592 SVBPQ8N300 66 aa-0.91□□□□□ -2.56
CDKL3-204ENST00000520592 MYO18BQ8IUG5 2567 aa-0.91□□□□□ -2.56
CDKL3-204ENST00000520592 TOP2BQ02880 1626 aa-0.92□□□□□ -2.56
CDKL3-204ENST00000520592 A0A087WVE0 104 aa-0.92□□□□□ -2.56
CDKL3-204ENST00000520592 CRYM-AS1A6NIL9 109 aa-0.92□□□□□ -2.56
CDKL3-204ENST00000520592 SNCAP37840 140 aa-0.92□□□□□ -2.56
CDKL3-204ENST00000520592 KRTAP19-6Q3LI70 58 aa-0.92□□□□□ -2.56
CDKL3-204ENST00000520592 CUL7Q14999 1698 aa-0.92□□□□□ -2.56
CDKL3-204ENST00000520592 PRRC2CQ9Y520 2896 aaKnown RBP-0.92□□□□□ -2.56
CDKL3-204ENST00000520592 NKTRP30414 1462 aaKnown RBP-0.92□□□□□ -2.56
CDKL3-204ENST00000520592 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.93□□□□□ -2.56
CDKL3-204ENST00000520592 MT1AP04731 61 aa-0.93□□□□□ -2.56
CDKL3-204ENST00000520592 HEPN1Q6WQI6 88 aa-0.93□□□□□ -2.56
CDKL3-204ENST00000520592 C6orf201Q7Z4U5 140 aa-0.93□□□□□ -2.56
CDKL3-204ENST00000520592 VAMP8Q9BV40 100 aa-0.93□□□□□ -2.56
CDKL3-204ENST00000520592 C7orf77A4D0Y5 90 aa-0.94□□□□□ -2.56
CDKL3-204ENST00000520592 HMGN1P05114 100 aa-0.94□□□□□ -2.56
CDKL3-204ENST00000520592 HSD52Q0P140 79 aa-0.94□□□□□ -2.56
CDKL3-204ENST00000520592 IER3IP1Q9Y5U9 82 aa-0.94□□□□□ -2.56
CDKL3-204ENST00000520592 COL14A1Q05707 1796 aaKnown RBP-0.94□□□□□ -2.56
CDKL3-204ENST00000520592 LAMA1P25391 3075 aa-0.94□□□□□ -2.56
CDKL3-204ENST00000520592 TACC2O95359 2948 aa-0.94□□□□□ -2.56
CDKL3-204ENST00000520592 TRAV30A0A087WSZ9 112 aa-0.95□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms