RNA–Protein interactions for RNA: ENST00000520571.1

DENND3-213, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-213ENST00000520571 C6orf226Q5I0X4 101 aa8.67□□□□□ -1.02
DENND3-213ENST00000520571 A0A096LNJ9 63 aa8.66□□□□□ -1.02
DENND3-213ENST00000520571 TINCRA0A1B0GVN0 87 aa8.66□□□□□ -1.02
DENND3-213ENST00000520571 GAGE2EQ4V326 116 aa8.66□□□□□ -1.02
DENND3-213ENST00000520571 GAGE2DQ9UEU5 116 aa8.66□□□□□ -1.02
DENND3-213ENST00000520571 A0A1W2PNN7 141 aa8.65□□□□□ -1.02
DENND3-213ENST00000520571 J3QL48 77 aa8.65□□□□□ -1.02
DENND3-213ENST00000520571 HNRNPA3P51991 378 aaKnown RBP8.65□□□□□ -1.02
DENND3-213ENST00000520571 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.02
DENND3-213ENST00000520571 TRBV30A0A0K0K1B3 111 aa8.64□□□□□ -1.03
DENND3-213ENST00000520571 Q6ZRP5 223 aa8.64□□□□□ -1.03
DENND3-213ENST00000520571 Q8IZM0 81 aa8.64□□□□□ -1.03
DENND3-213ENST00000520571 ATP5LO75964 103 aa8.63□□□□□ -1.03
DENND3-213ENST00000520571 SPINK8P0C7L1 97 aa8.63□□□□□ -1.03
DENND3-213ENST00000520571 BAGE3Q86Y29 109 aa8.63□□□□□ -1.03
DENND3-213ENST00000520571 FAM168BA1KXE4 195 aa8.62□□□□□ -1.03
DENND3-213ENST00000520571 H3BRM9 83 aa8.62□□□□□ -1.03
DENND3-213ENST00000520571 TRGC2P03986 189 aa8.62□□□□□ -1.03
DENND3-213ENST00000520571 TLX1NBP0CAT3 122 aa8.62□□□□□ -1.03
DENND3-213ENST00000520571 PDZD11Q5EBL8 140 aa8.62□□□□□ -1.03
DENND3-213ENST00000520571 SMIM1B2RUZ4 78 aa8.61□□□□□ -1.03
DENND3-213ENST00000520571 NDUFC2-KCTD14E9PQ53 114 aa8.61□□□□□ -1.03
DENND3-213ENST00000520571 PRR3P79522 188 aaKnown RBP8.61□□□□□ -1.03
DENND3-213ENST00000520571 CHCHD1Q96BP2 118 aaKnown RBP8.61□□□□□ -1.03
DENND3-213ENST00000520571 IGLV5-45A0A087WSX0 123 aa8.6□□□□□ -1.03
DENND3-213ENST00000520571 F8VRH5 84 aa8.6□□□□□ -1.03
DENND3-213ENST00000520571 IGLC3P0DOY3 106 aa8.6□□□□□ -1.03
DENND3-213ENST00000520571 PHF5AQ7RTV0 110 aaKnown RBP8.6□□□□□ -1.03
DENND3-213ENST00000520571 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
DENND3-213ENST00000520571 COX7B2Q8TF08 81 aa8.6□□□□□ -1.03
DENND3-213ENST00000520571 KRTAP29-1A8MX34 341 aaPredicted RBP8.59□□□□□ -1.03
DENND3-213ENST00000520571 HSBP1O75506 76 aa8.59□□□□□ -1.03
DENND3-213ENST00000520571 FAM19A2Q8N3H0 131 aa8.58□□□□□ -1.04
DENND3-213ENST00000520571 COLCA2A8K830 154 aa8.57□□□□□ -1.04
DENND3-213ENST00000520571 ZNF22P17026 224 aaPredicted RBP8.57□□□□□ -1.04
DENND3-213ENST00000520571 CXCL5P42830 114 aa8.57□□□□□ -1.04
DENND3-213ENST00000520571 IFI27L1Q96BM0 104 aa8.57□□□□□ -1.04
DENND3-213ENST00000520571 CHTOPQ9Y3Y2 248 aaKnown RBP8.57□□□□□ -1.04
DENND3-213ENST00000520571 SCO1O75880 301 aa8.56□□□□□ -1.04
DENND3-213ENST00000520571 OXTP01178 125 aa8.56□□□□□ -1.04
DENND3-213ENST00000520571 C9orf129Q5T035 196 aaKnown RBP8.56□□□□□ -1.04
DENND3-213ENST00000520571 TMEM170BQ5T4T1 132 aa8.56□□□□□ -1.04
DENND3-213ENST00000520571 XAGE1AQ9HD64 81 aa8.56□□□□□ -1.04
DENND3-213ENST00000520571 C11orf86A6NJI1 115 aa8.55□□□□□ -1.04
DENND3-213ENST00000520571 PSORS1C2Q9UIG4 136 aa8.55□□□□□ -1.04
DENND3-213ENST00000520571 M0QXV9 152 aa8.54□□□□□ -1.04
DENND3-213ENST00000520571 SERF1AO75920 110 aa8.54□□□□□ -1.04
DENND3-213ENST00000520571 IGLV5-39A0A0G2JS06 123 aa8.53□□□□□ -1.04
DENND3-213ENST00000520571 H0Y8G0 127 aa8.53□□□□□ -1.04
DENND3-213ENST00000520571 UBE2BP63146 152 aa8.53□□□□□ -1.04
DENND3-213ENST00000520571 C1orf137Q5JT78 98 aa8.53□□□□□ -1.04
DENND3-213ENST00000520571 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
DENND3-213ENST00000520571 TNXBP22105 4242 aa8.52□□□□□ -1.05
DENND3-213ENST00000520571 TRAV12-1A0A0B4J245 112 aa8.51□□□□□ -1.05
DENND3-213ENST00000520571 LEPROTL1O95214 131 aa8.51□□□□□ -1.05
DENND3-213ENST00000520571 FABP4P15090 132 aa8.51□□□□□ -1.05
DENND3-213ENST00000520571 PFN2P35080 140 aa8.51□□□□□ -1.05
DENND3-213ENST00000520571 LINC00310P59036 64 aa8.51□□□□□ -1.05
DENND3-213ENST00000520571 SERTAD4-AS1Q5TG53 156 aa8.51□□□□□ -1.05
DENND3-213ENST00000520571 NUPR1O60356 82 aa8.5□□□□□ -1.05
DENND3-213ENST00000520571 SPINK6Q6UWN8 80 aa8.5□□□□□ -1.05
DENND3-213ENST00000520571 KRTAP11-1Q8IUC1 163 aa8.5□□□□□ -1.05
DENND3-213ENST00000520571 ZNF625Q96I27 306 aaPredicted RBP8.49□□□□□ -1.05
DENND3-213ENST00000520571 C22orf24Q9Y442 160 aa8.49□□□□□ -1.05
DENND3-213ENST00000520571 SRSF9Q13242 221 aaKnown RBP eCLIP8.48□□□□□ -1.05
DENND3-213ENST00000520571 HSPB8Q9UJY1 196 aa8.48□□□□□ -1.05
DENND3-213ENST00000520571 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
DENND3-213ENST00000520571 LBHQ53QV2 105 aaPredicted RBP8.47□□□□□ -1.05
DENND3-213ENST00000520571 REG3GQ6UW15 175 aa8.47□□□□□ -1.05
DENND3-213ENST00000520571 ERG28Q9UKR5 140 aa8.47□□□□□ -1.05
DENND3-213ENST00000520571 IGLV7-43P04211 117 aa8.46□□□□□ -1.06
DENND3-213ENST00000520571 ODF1Q14990 250 aa8.46□□□□□ -1.06
DENND3-213ENST00000520571 SFTA2Q6UW10 78 aa8.45□□□□□ -1.06
DENND3-213ENST00000520571 GAGE10A6NGK3 116 aa8.44□□□□□ -1.06
DENND3-213ENST00000520571 HIST1H2BKO60814 126 aa8.44□□□□□ -1.06
DENND3-213ENST00000520571 HIST1H2BJP06899 126 aa8.44□□□□□ -1.06
DENND3-213ENST00000520571 HIST1H2BOP23527 126 aa8.44□□□□□ -1.06
DENND3-213ENST00000520571 HIST1H2BBP33778 126 aa8.44□□□□□ -1.06
DENND3-213ENST00000520571 HIST1H2BDP58876 126 aa8.44□□□□□ -1.06
DENND3-213ENST00000520571 HIST1H2BCP62807 126 aa8.44□□□□□ -1.06
DENND3-213ENST00000520571 HIST2H2BEQ16778 126 aa8.44□□□□□ -1.06
DENND3-213ENST00000520571 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.44□□□□□ -1.06
DENND3-213ENST00000520571 MRPL55Q7Z7F7 128 aaKnown RBP8.44□□□□□ -1.06
DENND3-213ENST00000520571 HIST1H2BHQ93079 126 aa8.44□□□□□ -1.06
DENND3-213ENST00000520571 HIST1H2BNQ99877 126 aa8.44□□□□□ -1.06
DENND3-213ENST00000520571 HIST1H2BMQ99879 126 aa8.44□□□□□ -1.06
DENND3-213ENST00000520571 PMCHL2Q9BQD1 86 aa8.44□□□□□ -1.06
DENND3-213ENST00000520571 A0A0U1RRA0 63 aa8.43□□□□□ -1.06
DENND3-213ENST00000520571 RPL37AP8A6NKH3 93 aa8.43□□□□□ -1.06
DENND3-213ENST00000520571 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
DENND3-213ENST00000520571 LINC00158P58513 81 aa8.43□□□□□ -1.06
DENND3-213ENST00000520571 COX17Q14061 63 aa8.43□□□□□ -1.06
DENND3-213ENST00000520571 NKAPP1Q8N9T2 125 aa8.43□□□□□ -1.06
DENND3-213ENST00000520571 MAP1LC3CQ9BXW4 147 aa8.43□□□□□ -1.06
DENND3-213ENST00000520571 SND1-IT1Q9HBX3 110 aa8.43□□□□□ -1.06
DENND3-213ENST00000520571 HMCN2Q8NDA2 5059 aa8.43□□□□□ -1.06
DENND3-213ENST00000520571 PLNP26678 52 aa8.42□□□□□ -1.06
DENND3-213ENST00000520571 DIRC1Q969H9 104 aa8.42□□□□□ -1.06
DENND3-213ENST00000520571 LINC01600Q96MT4 127 aa8.42□□□□□ -1.06
DENND3-213ENST00000520571 TP73-AS1Q9UF72 201 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms