RNA–Protein interactions for RNA: ENST00000520229.1

PDGFRB-206, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-206ENST00000520229 HBDP02042 147 aa9.67□□□□□ -0.86
PDGFRB-206ENST00000520229 TLX1NBP0CAT3 122 aa9.67□□□□□ -0.86
PDGFRB-206ENST00000520229 PMVKQ15126 192 aa9.67□□□□□ -0.86
PDGFRB-206ENST00000520229 C9orf116Q5BN46 136 aaPredicted RBP9.67□□□□□ -0.86
PDGFRB-206ENST00000520229 C6orf226Q5I0X4 101 aa9.67□□□□□ -0.86
PDGFRB-206ENST00000520229 CBLN2Q8IUK8 224 aa9.67□□□□□ -0.86
PDGFRB-206ENST00000520229 Q8IZM0 81 aa9.67□□□□□ -0.86
PDGFRB-206ENST00000520229 URB1-AS1Q96HZ7 61 aa9.67□□□□□ -0.86
PDGFRB-206ENST00000520229 A0A096LNJ9 63 aa9.66□□□□□ -0.86
PDGFRB-206ENST00000520229 PRR3P79522 188 aaKnown RBP9.66□□□□□ -0.86
PDGFRB-206ENST00000520229 Q6ZRP5 223 aa9.66□□□□□ -0.86
PDGFRB-206ENST00000520229 SLC7A5P1Q8MH63 180 aa9.66□□□□□ -0.86
PDGFRB-206ENST00000520229 TNXBP22105 4242 aa9.65□□□□□ -0.86
PDGFRB-206ENST00000520229 OXTP01178 125 aa9.65□□□□□ -0.86
PDGFRB-206ENST00000520229 PMCHL1Q16048 86 aa9.65□□□□□ -0.86
PDGFRB-206ENST00000520229 GAGE2EQ4V326 116 aa9.65□□□□□ -0.86
PDGFRB-206ENST00000520229 GAGE2DQ9UEU5 116 aa9.65□□□□□ -0.86
PDGFRB-206ENST00000520229 IGLV5-45A0A087WSX0 123 aa9.64□□□□□ -0.87
PDGFRB-206ENST00000520229 SMIM1B2RUZ4 78 aa9.64□□□□□ -0.87
PDGFRB-206ENST00000520229 NDUFA6P56556 154 aa9.64□□□□□ -0.87
PDGFRB-206ENST00000520229 NDUFC2-KCTD14E9PQ53 114 aa9.63□□□□□ -0.87
PDGFRB-206ENST00000520229 PDZD11Q5EBL8 140 aa9.63□□□□□ -0.87
PDGFRB-206ENST00000520229 ATP5LO75964 103 aa9.62□□□□□ -0.87
PDGFRB-206ENST00000520229 CXCL5P42830 114 aa9.62□□□□□ -0.87
PDGFRB-206ENST00000520229 F8VRH5 84 aa9.61□□□□□ -0.87
PDGFRB-206ENST00000520229 H3BRM9 83 aa9.61□□□□□ -0.87
PDGFRB-206ENST00000520229 SPINK8P0C7L1 97 aa9.61□□□□□ -0.87
PDGFRB-206ENST00000520229 PHF5AQ7RTV0 110 aaKnown RBP9.61□□□□□ -0.87
PDGFRB-206ENST00000520229 FAM19A5Q7Z5A7 132 aaPredicted RBP9.61□□□□□ -0.87
PDGFRB-206ENST00000520229 COX7B2Q8TF08 81 aa9.61□□□□□ -0.87
PDGFRB-206ENST00000520229 FAM168BA1KXE4 195 aa9.6□□□□□ -0.87
PDGFRB-206ENST00000520229 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
PDGFRB-206ENST00000520229 CHCHD1Q96BP2 118 aaKnown RBP9.6□□□□□ -0.87
PDGFRB-206ENST00000520229 UBR4Q5T4S7 5183 aa9.6□□□□□ -0.87
PDGFRB-206ENST00000520229 TRGC2P03986 189 aa9.57□□□□□ -0.88
PDGFRB-206ENST00000520229 ZNF22P17026 224 aaPredicted RBP9.57□□□□□ -0.88
PDGFRB-206ENST00000520229 C9orf129Q5T035 196 aaKnown RBP9.57□□□□□ -0.88
PDGFRB-206ENST00000520229 BAGE3Q86Y29 109 aa9.57□□□□□ -0.88
PDGFRB-206ENST00000520229 M0QXV9 152 aa9.56□□□□□ -0.88
PDGFRB-206ENST00000520229 PSORS1C2Q9UIG4 136 aa9.56□□□□□ -0.88
PDGFRB-206ENST00000520229 HSBP1O75506 76 aa9.55□□□□□ -0.88
PDGFRB-206ENST00000520229 SPINK6Q6UWN8 80 aa9.55□□□□□ -0.88
PDGFRB-206ENST00000520229 UBE2BP63146 152 aa9.54□□□□□ -0.88
PDGFRB-206ENST00000520229 C1orf137Q5JT78 98 aa9.54□□□□□ -0.88
PDGFRB-206ENST00000520229 TMEM170BQ5T4T1 132 aa9.54□□□□□ -0.88
PDGFRB-206ENST00000520229 IFI27L1Q96BM0 104 aa9.54□□□□□ -0.88
PDGFRB-206ENST00000520229 XAGE1AQ9HD64 81 aa9.54□□□□□ -0.88
PDGFRB-206ENST00000520229 CHTOPQ9Y3Y2 248 aaKnown RBP9.54□□□□□ -0.88
PDGFRB-206ENST00000520229 IGLV5-39A0A0G2JS06 123 aa9.53□□□□□ -0.88
PDGFRB-206ENST00000520229 C11orf86A6NJI1 115 aa9.53□□□□□ -0.88
PDGFRB-206ENST00000520229 KRTAP7-1Q8IUC3 87 aa9.53□□□□□ -0.88
PDGFRB-206ENST00000520229 FAM19A2Q8N3H0 131 aa9.52□□□□□ -0.89
PDGFRB-206ENST00000520229 TRAV12-1A0A0B4J245 112 aa9.51□□□□□ -0.89
PDGFRB-206ENST00000520229 COLCA2A8K830 154 aa9.51□□□□□ -0.89
PDGFRB-206ENST00000520229 MT1HL1P0DM35 61 aa9.51□□□□□ -0.89
PDGFRB-206ENST00000520229 SRSF9Q13242 221 aaKnown RBP eCLIP9.51□□□□□ -0.89
PDGFRB-206ENST00000520229 SERTAD4-AS1Q5TG53 156 aa9.51□□□□□ -0.89
PDGFRB-206ENST00000520229 REG3GQ6UW15 175 aa9.51□□□□□ -0.89
PDGFRB-206ENST00000520229 SERF1AO75920 110 aa9.5□□□□□ -0.89
PDGFRB-206ENST00000520229 KRTAP11-1Q8IUC1 163 aa9.5□□□□□ -0.89
PDGFRB-206ENST00000520229 LRP2P98164 4655 aa9.48□□□□□ -0.89
PDGFRB-206ENST00000520229 LBHQ53QV2 105 aaPredicted RBP9.48□□□□□ -0.89
PDGFRB-206ENST00000520229 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
PDGFRB-206ENST00000520229 H0Y8G0 127 aa9.47□□□□□ -0.89
PDGFRB-206ENST00000520229 LEPROTL1O95214 131 aa9.47□□□□□ -0.89
PDGFRB-206ENST00000520229 IGLV7-43P04211 117 aa9.47□□□□□ -0.89
PDGFRB-206ENST00000520229 PFN2P35080 140 aa9.47□□□□□ -0.89
PDGFRB-206ENST00000520229 LINC00310P59036 64 aa9.47□□□□□ -0.89
PDGFRB-206ENST00000520229 LINC01600Q96MT4 127 aa9.47□□□□□ -0.89
PDGFRB-206ENST00000520229 SCO1O75880 301 aa9.46□□□□□ -0.9
PDGFRB-206ENST00000520229 SFTA2Q6UW10 78 aa9.46□□□□□ -0.9
PDGFRB-206ENST00000520229 TP73-AS1Q9UF72 201 aa9.46□□□□□ -0.9
PDGFRB-206ENST00000520229 ERG28Q9UKR5 140 aa9.46□□□□□ -0.9
PDGFRB-206ENST00000520229 TMEM223A0PJW6 202 aa9.45□□□□□ -0.9
PDGFRB-206ENST00000520229 MRPL55Q7Z7F7 128 aaKnown RBP9.45□□□□□ -0.9
PDGFRB-206ENST00000520229 ZNF625Q96I27 306 aaPredicted RBP9.45□□□□□ -0.9
PDGFRB-206ENST00000520229 ODF1Q14990 250 aa9.44□□□□□ -0.9
PDGFRB-206ENST00000520229 DIRC1Q969H9 104 aa9.44□□□□□ -0.9
PDGFRB-206ENST00000520229 HSPB8Q9UJY1 196 aa9.44□□□□□ -0.9
PDGFRB-206ENST00000520229 PLA2G2DQ9UNK4 145 aa9.44□□□□□ -0.9
PDGFRB-206ENST00000520229 NUPR1O60356 82 aa9.43□□□□□ -0.9
PDGFRB-206ENST00000520229 FABP4P15090 132 aa9.43□□□□□ -0.9
PDGFRB-206ENST00000520229 COX17Q14061 63 aa9.43□□□□□ -0.9
PDGFRB-206ENST00000520229 NKAPP1Q8N9T2 125 aa9.42□□□□□ -0.9
PDGFRB-206ENST00000520229 IGLV5-37A0A075B6J1 123 aa9.4□□□□□ -0.9
PDGFRB-206ENST00000520229 GAGE10A6NGK3 116 aa9.4□□□□□ -0.9
PDGFRB-206ENST00000520229 H0Y9J4 135 aa9.4□□□□□ -0.9
PDGFRB-206ENST00000520229 LINC00167Q96N53 147 aa9.4□□□□□ -0.9
PDGFRB-206ENST00000520229 SND1-IT1Q9HBX3 110 aa9.4□□□□□ -0.9
PDGFRB-206ENST00000520229 PLNP26678 52 aa9.39□□□□□ -0.91
PDGFRB-206ENST00000520229 LINC00158P58513 81 aa9.39□□□□□ -0.91
PDGFRB-206ENST00000520229 RPL37AP8A6NKH3 93 aa9.38□□□□□ -0.91
PDGFRB-206ENST00000520229 HIST1H2BKO60814 126 aa9.37□□□□□ -0.91
PDGFRB-206ENST00000520229 DPM2O94777 84 aa9.37□□□□□ -0.91
PDGFRB-206ENST00000520229 HIST1H2BJP06899 126 aa9.37□□□□□ -0.91
PDGFRB-206ENST00000520229 HIST1H2BOP23527 126 aa9.37□□□□□ -0.91
PDGFRB-206ENST00000520229 HIST1H2BBP33778 126 aa9.37□□□□□ -0.91
PDGFRB-206ENST00000520229 HIST1H2BDP58876 126 aa9.37□□□□□ -0.91
PDGFRB-206ENST00000520229 KRTAP10-8P60410 259 aa9.37□□□□□ -0.91
PDGFRB-206ENST00000520229 HIST1H2BCP62807 126 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms