RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 UBE2AP49459 152 aa7.06□□□□□ -1.28
TRAPPC9-204ENST00000518723 C2orf88Q9BSF0 95 aa7.06□□□□□ -1.28
TRAPPC9-204ENST00000518723 ALKBH7Q9BT30 221 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC9-204ENST00000518723 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC9-204ENST00000518723 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
TRAPPC9-204ENST00000518723 F8W036 122 aa7.04□□□□□ -1.28
TRAPPC9-204ENST00000518723 FAM19A3Q7Z5A8 133 aa7.04□□□□□ -1.28
TRAPPC9-204ENST00000518723 AMELXQ99217 191 aa7.04□□□□□ -1.28
TRAPPC9-204ENST00000518723 GAGE10A6NGK3 116 aa7.03□□□□□ -1.28
TRAPPC9-204ENST00000518723 S100A8P05109 93 aa7.03□□□□□ -1.28
TRAPPC9-204ENST00000518723 KRTAP4-1Q9BYQ7 146 aa7.03□□□□□ -1.28
TRAPPC9-204ENST00000518723 A0A1B0GXF2 115 aa7.02□□□□□ -1.29
TRAPPC9-204ENST00000518723 SRP19P09132 144 aaKnown RBP7.02□□□□□ -1.29
TRAPPC9-204ENST00000518723 NPSP0C0P6 89 aa7.02□□□□□ -1.29
TRAPPC9-204ENST00000518723 CXCL5P42830 114 aa7.02□□□□□ -1.29
TRAPPC9-204ENST00000518723 SRSF3P84103 164 aaKnown RBP7.02□□□□□ -1.29
TRAPPC9-204ENST00000518723 PNRC1Q12796 327 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC9-204ENST00000518723 KRTAP13-3Q3SY46 172 aa7.02□□□□□ -1.29
TRAPPC9-204ENST00000518723 ZC2HC1BQ5TFG8 222 aa7.02□□□□□ -1.29
TRAPPC9-204ENST00000518723 C2orf66Q6UXQ4 117 aa7.02□□□□□ -1.29
TRAPPC9-204ENST00000518723 TCTE3Q8IZS6 198 aa7.02□□□□□ -1.29
TRAPPC9-204ENST00000518723 ORMDL3Q8N138 153 aa7.02□□□□□ -1.29
TRAPPC9-204ENST00000518723 VCX2Q9H322 139 aa7.02□□□□□ -1.29
TRAPPC9-204ENST00000518723 PRSS47A8MTI9 375 aa7.01□□□□□ -1.29
TRAPPC9-204ENST00000518723 RPL23P62829 140 aaKnown RBP7.01□□□□□ -1.29
TRAPPC9-204ENST00000518723 SPAG11AQ6PDA7 123 aa7.01□□□□□ -1.29
TRAPPC9-204ENST00000518723 ALKAL2Q6UX46 152 aa7.01□□□□□ -1.29
TRAPPC9-204ENST00000518723 LINC00337Q8N6G1 96 aa7.01□□□□□ -1.29
TRAPPC9-204ENST00000518723 CYSLTR1Q9Y271 337 aa7.01□□□□□ -1.29
TRAPPC9-204ENST00000518723 HERVK_113P63121 156 aa7□□□□□ -1.29
TRAPPC9-204ENST00000518723 SEC11AP67812 179 aa7□□□□□ -1.29
TRAPPC9-204ENST00000518723 MRPL54Q6P161 138 aaKnown RBP7□□□□□ -1.29
TRAPPC9-204ENST00000518723 NKAPP1Q8N9T2 125 aa7□□□□□ -1.29
TRAPPC9-204ENST00000518723 PRELID3AQ96N28 172 aa7□□□□□ -1.29
TRAPPC9-204ENST00000518723 CDKN2A-AS1Q9UH64 79 aa7□□□□□ -1.29
TRAPPC9-204ENST00000518723 SEC61BP60468 96 aaKnown RBP6.99□□□□□ -1.29
TRAPPC9-204ENST00000518723 TMEM136Q6ZRR5 245 aa6.99□□□□□ -1.29
TRAPPC9-204ENST00000518723 C3orf22Q8N5N4 141 aa6.99□□□□□ -1.29
TRAPPC9-204ENST00000518723 IGIPA6NJ69 53 aa6.98□□□□□ -1.29
TRAPPC9-204ENST00000518723 ADIRFQ15847 76 aa6.98□□□□□ -1.29
TRAPPC9-204ENST00000518723 LAMTOR2Q9Y2Q5 125 aa6.98□□□□□ -1.29
TRAPPC9-204ENST00000518723 IGKV2-28A0A075B6P5 120 aa6.97□□□□□ -1.29
TRAPPC9-204ENST00000518723 IGKV2D-28P01615 120 aa6.97□□□□□ -1.29
TRAPPC9-204ENST00000518723 PRLHP81277 87 aa6.97□□□□□ -1.29
TRAPPC9-204ENST00000518723 C4orf48Q5BLP8 95 aa6.97□□□□□ -1.29
TRAPPC9-204ENST00000518723 PLEKHB2Q96CS7 222 aa6.97□□□□□ -1.29
TRAPPC9-204ENST00000518723 GEMIN7Q9H840 131 aaKnown RBP6.97□□□□□ -1.29
TRAPPC9-204ENST00000518723 NAT8Q9UHE5 227 aa6.97□□□□□ -1.29
TRAPPC9-204ENST00000518723 Q8N8P6 123 aa6.96□□□□□ -1.3
TRAPPC9-204ENST00000518723 TMEM126AQ9H061 195 aa6.96□□□□□ -1.3
TRAPPC9-204ENST00000518723 MAP1LC3AQ9H492 121 aa6.96□□□□□ -1.3
TRAPPC9-204ENST00000518723 LOC389332A0A1B0GUA5 103 aa6.95□□□□□ -1.3
TRAPPC9-204ENST00000518723 SMIM1B2RUZ4 78 aa6.95□□□□□ -1.3
TRAPPC9-204ENST00000518723 SCO1O75880 301 aa6.95□□□□□ -1.3
TRAPPC9-204ENST00000518723 ORMDL2Q53FV1 153 aa6.95□□□□□ -1.3
TRAPPC9-204ENST00000518723 PAPPA-AS1Q5QFB9 102 aa6.95□□□□□ -1.3
TRAPPC9-204ENST00000518723 ATP5L2Q7Z4Y8 100 aa6.95□□□□□ -1.3
TRAPPC9-204ENST00000518723 FAM19A1Q7Z5A9 133 aa6.95□□□□□ -1.3
TRAPPC9-204ENST00000518723 GNB1LQ9BYB4 327 aa6.95□□□□□ -1.3
TRAPPC9-204ENST00000518723 K7EMI3 77 aa6.94□□□□□ -1.3
TRAPPC9-204ENST00000518723 PDZD11Q5EBL8 140 aa6.94□□□□□ -1.3
TRAPPC9-204ENST00000518723 LCE2CQ5TA81 110 aa6.94□□□□□ -1.3
TRAPPC9-204ENST00000518723 COX7B2Q8TF08 81 aa6.94□□□□□ -1.3
TRAPPC9-204ENST00000518723 TMEM238C9JI98 176 aa6.93□□□□□ -1.3
TRAPPC9-204ENST00000518723 RAB5BP61020 215 aa6.93□□□□□ -1.3
TRAPPC9-204ENST00000518723 CBLN2Q8IUK8 224 aa6.93□□□□□ -1.3
TRAPPC9-204ENST00000518723 TIMM17AQ99595 171 aa6.93□□□□□ -1.3
TRAPPC9-204ENST00000518723 M0R378 163 aa6.92□□□□□ -1.3
TRAPPC9-204ENST00000518723 IGLV5-45A0A087WSX0 123 aa6.91□□□□□ -1.3
TRAPPC9-204ENST00000518723 C9JQL5 133 aa6.91□□□□□ -1.3
TRAPPC9-204ENST00000518723 VPREB1P12018 145 aa6.91□□□□□ -1.3
TRAPPC9-204ENST00000518723 SPRR4Q96PI1 79 aa6.91□□□□□ -1.3
TRAPPC9-204ENST00000518723 TINCRA0A1B0GVN0 87 aa6.9□□□□□ -1.3
TRAPPC9-204ENST00000518723 SPINK1P00995 79 aa6.9□□□□□ -1.3
TRAPPC9-204ENST00000518723 G0S2P27469 103 aa6.9□□□□□ -1.3
TRAPPC9-204ENST00000518723 A0A1B0GVG6 124 aa6.89□□□□□ -1.31
TRAPPC9-204ENST00000518723 CFC1BP0CG36 223 aa6.89□□□□□ -1.31
TRAPPC9-204ENST00000518723 Q8NBF4 154 aa6.89□□□□□ -1.31
TRAPPC9-204ENST00000518723 TOMM6Q96B49 74 aa6.89□□□□□ -1.31
TRAPPC9-204ENST00000518723 HIGD2AQ9BW72 106 aa6.89□□□□□ -1.31
TRAPPC9-204ENST00000518723 NXT2Q9NPJ8 142 aaKnown RBP6.89□□□□□ -1.31
TRAPPC9-204ENST00000518723 ATP5LO75964 103 aa6.88□□□□□ -1.31
TRAPPC9-204ENST00000518723 MT1HP80294 61 aa6.88□□□□□ -1.31
TRAPPC9-204ENST00000518723 KRTAP19-2Q3LHN2 52 aa6.88□□□□□ -1.31
TRAPPC9-204ENST00000518723 XP32Q5T750 250 aa6.88□□□□□ -1.31
TRAPPC9-204ENST00000518723 ERASQ7Z444 233 aa6.88□□□□□ -1.31
TRAPPC9-204ENST00000518723 DAND5Q8N907 189 aa6.88□□□□□ -1.31
TRAPPC9-204ENST00000518723 ZNF706Q9Y5V0 76 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC9-204ENST00000518723 SPINK8P0C7L1 97 aa6.87□□□□□ -1.31
TRAPPC9-204ENST00000518723 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
TRAPPC9-204ENST00000518723 NDUFA12Q9UI09 145 aa6.87□□□□□ -1.31
TRAPPC9-204ENST00000518723 SND1-IT1Q9HBX3 110 aa6.86□□□□□ -1.31
TRAPPC9-204ENST00000518723 PFN2P35080 140 aa6.85□□□□□ -1.31
TRAPPC9-204ENST00000518723 RPS29P62273 56 aaKnown RBP6.85□□□□□ -1.31
TRAPPC9-204ENST00000518723 PEA15Q15121 130 aa6.85□□□□□ -1.31
TRAPPC9-204ENST00000518723 FAM19A2Q8N3H0 131 aa6.85□□□□□ -1.31
TRAPPC9-204ENST00000518723 Q8NDZ9 215 aa6.85□□□□□ -1.31
TRAPPC9-204ENST00000518723 MRPL18Q9H0U6 180 aaKnown RBP6.85□□□□□ -1.31
TRAPPC9-204ENST00000518723 SCGB3A1Q96QR1 104 aa6.84□□□□□ -1.31
TRAPPC9-204ENST00000518723 ADCYAP1P18509 176 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms