RNA–Protein interactions for RNA: ENST00000518436.5

LINC01339-202, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-202ENST00000518436 GDF5OSQ5U4N7 250 aa1.68□□□□□ -2.14
LINC01339-202ENST00000518436 SLC48A1Q6P1K1 146 aa1.68□□□□□ -2.14
LINC01339-202ENST00000518436 CSAG1Q6PB30 78 aa1.68□□□□□ -2.14
LINC01339-202ENST00000518436 C15orf53Q8NAA6 179 aa1.68□□□□□ -2.14
LINC01339-202ENST00000518436 ZNF625Q96I27 306 aaPredicted RBP1.68□□□□□ -2.14
LINC01339-202ENST00000518436 MRPL36Q9P0J6 103 aaKnown RBP1.68□□□□□ -2.14
LINC01339-202ENST00000518436 EPPK1P58107 5090 aaKnown RBP1.68□□□□□ -2.14
LINC01339-202ENST00000518436 NSD1Q96L73 2696 aaPredicted RBP1.68□□□□□ -2.14
LINC01339-202ENST00000518436 SVEP1Q4LDE5 3571 aa1.68□□□□□ -2.14
LINC01339-202ENST00000518436 BIRC6Q9NR09 4857 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 MYH9P35579 1960 aaKnown RBP1.67□□□□□ -2.14
LINC01339-202ENST00000518436 TLN2Q9Y4G6 2542 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 TRAV30A0A087WSZ9 112 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 IGKV3D-7A0A0C4DH55 119 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 IGKV3OR2-268A0A0C4DH90 116 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 DNAL4O96015 105 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 IFNA17P01571 189 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 SLC25A6P12236 298 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 CBLN1P23435 193 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 HSD52Q0P140 79 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 CATR1Q13166 79 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 SPATA45Q537H7 98 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 RPL7L1Q6DKI1 246 aaKnown RBP1.67□□□□□ -2.14
LINC01339-202ENST00000518436 SVBPQ8N300 66 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 TSKUQ8WUA8 353 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 LSM10Q969L4 123 aaKnown RBP1.67□□□□□ -2.14
LINC01339-202ENST00000518436 MRPL57Q9BQC6 102 aaKnown RBP1.67□□□□□ -2.14
LINC01339-202ENST00000518436 KIAA1549Q9HCM3 1950 aa1.67□□□□□ -2.14
LINC01339-202ENST00000518436 IGLV3-1P01715 115 aa1.66□□□□□ -2.14
LINC01339-202ENST00000518436 IGKCP01834 107 aa1.66□□□□□ -2.14
LINC01339-202ENST00000518436 NPC2P61916 151 aa1.66□□□□□ -2.14
LINC01339-202ENST00000518436 C9orf116Q5BN46 136 aaPredicted RBP1.66□□□□□ -2.14
LINC01339-202ENST00000518436 C9orf153Q5TBE3 101 aa1.66□□□□□ -2.14
LINC01339-202ENST00000518436 ODF3Q96PU9 254 aa1.66□□□□□ -2.14
LINC01339-202ENST00000518436 WFDC10AQ9H1F0 79 aa1.66□□□□□ -2.14
LINC01339-202ENST00000518436 MRPL35Q9NZE8 188 aaKnown RBP1.66□□□□□ -2.14
LINC01339-202ENST00000518436 TNRC6AQ8NDV7 1962 aaKnown RBP1.66□□□□□ -2.14
LINC01339-202ENST00000518436 MYOFQ9NZM1 2061 aa1.66□□□□□ -2.14
LINC01339-202ENST00000518436 ALPK2Q86TB3 2170 aa1.65□□□□□ -2.14
LINC01339-202ENST00000518436 MYO18AQ92614 2054 aaKnown RBP1.65□□□□□ -2.14
LINC01339-202ENST00000518436 IGKV3-7A0A075B6H7 116 aa1.65□□□□□ -2.15
LINC01339-202ENST00000518436 HIGD1CA8MV81 97 aa1.65□□□□□ -2.15
LINC01339-202ENST00000518436 IFITM1P13164 125 aa1.65□□□□□ -2.15
LINC01339-202ENST00000518436 C4orf33Q8N1A6 199 aa1.65□□□□□ -2.15
LINC01339-202ENST00000518436 AQP10Q96PS8 301 aa1.65□□□□□ -2.15
LINC01339-202ENST00000518436 LIMD2Q9BT23 127 aa1.65□□□□□ -2.15
LINC01339-202ENST00000518436 PKDREJQ9NTG1 2253 aa1.64□□□□□ -2.15
LINC01339-202ENST00000518436 HYDINQ4G0P3 5121 aa1.64□□□□□ -2.15
LINC01339-202ENST00000518436 IGKV2-40A0A087WW87 121 aaPredicted RBP1.64□□□□□ -2.15
LINC01339-202ENST00000518436 TRBV6-7A0A0A0MS04 114 aa1.64□□□□□ -2.15
LINC01339-202ENST00000518436 IGKV2D-40P01614 121 aaPredicted RBP1.64□□□□□ -2.15
LINC01339-202ENST00000518436 UQCRHP07919 91 aa1.64□□□□□ -2.15
LINC01339-202ENST00000518436 SPRNQ5BIV9 151 aa1.64□□□□□ -2.15
LINC01339-202ENST00000518436 Q8N8P6 123 aa1.64□□□□□ -2.15
LINC01339-202ENST00000518436 PRKDCP78527 4128 aaKnown RBP1.64□□□□□ -2.15
LINC01339-202ENST00000518436 PCLOQ9Y6V0 5065 aa1.64□□□□□ -2.15
LINC01339-202ENST00000518436 ABCA4P78363 2273 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 TRBV10-3A0A0K0K1G6 114 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 TEX49A0A1B0GTD5 131 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 TCRBV3S1A0A5B6 114 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 FAM24AA6NFZ4 105 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 M0R143 59 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 CCKP06307 115 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 ATP5EP56381 51 aaPredicted RBP1.63□□□□□ -2.15
LINC01339-202ENST00000518436 UBE2G1P62253 170 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 TFF3Q07654 80 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 ZNF720Q7Z2F6 126 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 DOCK10Q96BY6 2186 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 MED12LQ86YW9 2145 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 TRRAPQ9Y4A5 3859 aa1.63□□□□□ -2.15
LINC01339-202ENST00000518436 ZANQ9Y493 2812 aa1.62□□□□□ -2.15
LINC01339-202ENST00000518436 TRAV23DV6A0A075B6W5 121 aa1.62□□□□□ -2.15
LINC01339-202ENST00000518436 OOSP1A8MZH6 123 aa1.62□□□□□ -2.15
LINC01339-202ENST00000518436 STATHP02808 62 aa1.62□□□□□ -2.15
LINC01339-202ENST00000518436 SPINK8P0C7L1 97 aa1.62□□□□□ -2.15
LINC01339-202ENST00000518436 KRTAP12-3P60328 96 aa1.62□□□□□ -2.15
LINC01339-202ENST00000518436 IQCJQ1A5X6 159 aa1.62□□□□□ -2.15
LINC01339-202ENST00000518436 C5orf38Q86SI9 138 aa1.62□□□□□ -2.15
LINC01339-202ENST00000518436 MGAM2Q2M2H8 2515 aa1.62□□□□□ -2.15
LINC01339-202ENST00000518436 RYR1P21817 5038 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 H3BQ15 152 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 SSSCA1O60232 199 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 RPL37AP61513 92 aaKnown RBP1.61□□□□□ -2.15
LINC01339-202ENST00000518436 CCL8P80075 99 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 TTC9CQ8N5M4 171 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 C10orf105Q8TEF2 133 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 IFI27L1Q96BM0 104 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 AMELYQ99218 206 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 CCL19Q99731 98 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 TENM1Q9UKZ4 2725 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 FREM1Q5H8C1 2179 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 CITO14578 2027 aa1.61□□□□□ -2.15
LINC01339-202ENST00000518436 HRNRQ86YZ3 2850 aaPredicted RBP1.6□□□□□ -2.15
LINC01339-202ENST00000518436 TRAV12-3A0A0B4J271 114 aa1.6□□□□□ -2.15
LINC01339-202ENST00000518436 UBE2L5PA0A1B0GUS4 154 aa1.6□□□□□ -2.15
LINC01339-202ENST00000518436 TMEM262E9PQX1 116 aa1.6□□□□□ -2.15
LINC01339-202ENST00000518436 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
LINC01339-202ENST00000518436 PRB4P10163 310 aaPredicted RBP1.6□□□□□ -2.15
LINC01339-202ENST00000518436 KRTAP12-1P59990 96 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms