RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 SPINK8P0C7L1 97 aa7.49□□□□□ -1.21
ARFGEF1-202ENST00000517955 HERVK_113P61574 105 aa7.49□□□□□ -1.21
ARFGEF1-202ENST00000517955 ORAOV1Q8WV07 137 aa7.49□□□□□ -1.21
ARFGEF1-202ENST00000517955 FAT2Q9NYQ8 4349 aa7.49□□□□□ -1.21
ARFGEF1-202ENST00000517955 EPPK1P58107 5090 aaKnown RBP7.49□□□□□ -1.21
ARFGEF1-202ENST00000517955 PYY3Q5JQD4 70 aa7.48□□□□□ -1.21
ARFGEF1-202ENST00000517955 Q8N814 137 aa7.48□□□□□ -1.21
ARFGEF1-202ENST00000517955 NTN5Q8WTR8 489 aaPredicted RBP7.48□□□□□ -1.21
ARFGEF1-202ENST00000517955 ZNF561-AS1K7EIQ3 104 aa7.47□□□□□ -1.21
ARFGEF1-202ENST00000517955 LEPROTO15243 131 aa7.47□□□□□ -1.21
ARFGEF1-202ENST00000517955 CXCL5P42830 114 aa7.47□□□□□ -1.21
ARFGEF1-202ENST00000517955 CNBPP62633 177 aaKnown RBP7.47□□□□□ -1.21
ARFGEF1-202ENST00000517955 SPAG11BQ08648 103 aa7.47□□□□□ -1.21
ARFGEF1-202ENST00000517955 SFTA2Q6UW10 78 aa7.47□□□□□ -1.21
ARFGEF1-202ENST00000517955 COX7B2Q8TF08 81 aa7.47□□□□□ -1.21
ARFGEF1-202ENST00000517955 PLEKHB2Q96CS7 222 aa7.47□□□□□ -1.21
ARFGEF1-202ENST00000517955 hDV102S1A0JD36 115 aa7.46□□□□□ -1.22
ARFGEF1-202ENST00000517955 LECT2O14960 151 aa7.46□□□□□ -1.22
ARFGEF1-202ENST00000517955 PRSS2P07478 247 aa7.46□□□□□ -1.22
ARFGEF1-202ENST00000517955 C6orf226Q5I0X4 101 aa7.46□□□□□ -1.22
ARFGEF1-202ENST00000517955 STPG4Q8N801 248 aa7.46□□□□□ -1.22
ARFGEF1-202ENST00000517955 SLPIP03973 132 aa7.45□□□□□ -1.22
ARFGEF1-202ENST00000517955 RNF151Q2KHN1 245 aa7.45□□□□□ -1.22
ARFGEF1-202ENST00000517955 HIGD2BQ4VC39 106 aa7.45□□□□□ -1.22
ARFGEF1-202ENST00000517955 ATOH7Q8N100 152 aa7.45□□□□□ -1.22
ARFGEF1-202ENST00000517955 HECTD4Q9Y4D8 3996 aa7.44□□□□□ -1.22
ARFGEF1-202ENST00000517955 HSBP1L1C9JCN9 74 aa7.44□□□□□ -1.22
ARFGEF1-202ENST00000517955 J3QQQ9 107 aa7.44□□□□□ -1.22
ARFGEF1-202ENST00000517955 NMUP48645 174 aa7.44□□□□□ -1.22
ARFGEF1-202ENST00000517955 LINC00518Q8N0U6 118 aa7.44□□□□□ -1.22
ARFGEF1-202ENST00000517955 ZNF625Q96I27 306 aaPredicted RBP7.44□□□□□ -1.22
ARFGEF1-202ENST00000517955 TOMM7Q9P0U1 55 aa7.44□□□□□ -1.22
ARFGEF1-202ENST00000517955 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
ARFGEF1-202ENST00000517955 TRBV30A0A0K0K1B3 111 aa7.43□□□□□ -1.22
ARFGEF1-202ENST00000517955 A0A1B0GVY2 172 aa7.43□□□□□ -1.22
ARFGEF1-202ENST00000517955 NDUFA1O15239 70 aa7.43□□□□□ -1.22
ARFGEF1-202ENST00000517955 CKS1BP61024 79 aa7.43□□□□□ -1.22
ARFGEF1-202ENST00000517955 SYCNQ0VAF6 134 aa7.43□□□□□ -1.22
ARFGEF1-202ENST00000517955 ANKRD39Q53RE8 183 aa7.43□□□□□ -1.22
ARFGEF1-202ENST00000517955 PKD1P98161 4303 aa7.42□□□□□ -1.22
ARFGEF1-202ENST00000517955 IGKV2D-26A0A0A0MRZ7 120 aa7.42□□□□□ -1.22
ARFGEF1-202ENST00000517955 SMIM6P0DI80 62 aa7.42□□□□□ -1.22
ARFGEF1-202ENST00000517955 TSPEAR-AS2P59090 65 aa7.42□□□□□ -1.22
ARFGEF1-202ENST00000517955 MAJINQ3KP22 176 aa7.42□□□□□ -1.22
ARFGEF1-202ENST00000517955 C9orf163Q8N9P6 203 aa7.42□□□□□ -1.22
ARFGEF1-202ENST00000517955 LINC00526Q96FQ7 95 aa7.42□□□□□ -1.22
ARFGEF1-202ENST00000517955 CAMK2N2Q96S95 79 aa7.42□□□□□ -1.22
ARFGEF1-202ENST00000517955 DNAH11Q96DT5 4516 aa7.42□□□□□ -1.22
ARFGEF1-202ENST00000517955 KRTAP4-8A0A0G2JLE6 195 aa7.41□□□□□ -1.22
ARFGEF1-202ENST00000517955 MYMXA0A1B0GTQ4 84 aa7.41□□□□□ -1.22
ARFGEF1-202ENST00000517955 LGALS3P17931 250 aaKnown RBP7.41□□□□□ -1.22
ARFGEF1-202ENST00000517955 HERV-K104P63124 156 aa7.41□□□□□ -1.22
ARFGEF1-202ENST00000517955 UNQ6190/PRO20217Q6UXQ8 127 aa7.41□□□□□ -1.22
ARFGEF1-202ENST00000517955 Q6ZRU5 148 aa7.41□□□□□ -1.22
ARFGEF1-202ENST00000517955 CARD19Q96LW7 228 aa7.41□□□□□ -1.22
ARFGEF1-202ENST00000517955 NDUFA12Q9UI09 145 aa7.41□□□□□ -1.22
ARFGEF1-202ENST00000517955 TLX1NBP0CAT3 122 aa7.4□□□□□ -1.22
ARFGEF1-202ENST00000517955 COX17Q14061 63 aa7.4□□□□□ -1.22
ARFGEF1-202ENST00000517955 KRTAP19-4Q3LI73 84 aa7.4□□□□□ -1.22
ARFGEF1-202ENST00000517955 C10orf25Q5T742 122 aa7.4□□□□□ -1.22
ARFGEF1-202ENST00000517955 C2orf82Q6UX34 121 aa7.4□□□□□ -1.22
ARFGEF1-202ENST00000517955 VAMP8Q9BV40 100 aa7.4□□□□□ -1.22
ARFGEF1-202ENST00000517955 C6orf48Q9UBA6 75 aa7.4□□□□□ -1.22
ARFGEF1-202ENST00000517955 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.39□□□□□ -1.23
ARFGEF1-202ENST00000517955 LINC00587B1AMM8 73 aa7.39□□□□□ -1.23
ARFGEF1-202ENST00000517955 KRTAP10-2P60368 255 aa7.39□□□□□ -1.23
ARFGEF1-202ENST00000517955 S100A12P80511 92 aa7.39□□□□□ -1.23
ARFGEF1-202ENST00000517955 PKIGQ9Y2B9 76 aa7.39□□□□□ -1.23
ARFGEF1-202ENST00000517955 IGLV5-52A0A0A0MRZ9 124 aa7.38□□□□□ -1.23
ARFGEF1-202ENST00000517955 DLEU1O43261 78 aa7.38□□□□□ -1.23
ARFGEF1-202ENST00000517955 COX8AP10176 69 aa7.37□□□□□ -1.23
ARFGEF1-202ENST00000517955 SPATA45Q537H7 98 aa7.37□□□□□ -1.23
ARFGEF1-202ENST00000517955 SDIM1Q6ZPB5 146 aa7.37□□□□□ -1.23
ARFGEF1-202ENST00000517955 BOD1L2Q8IYS8 172 aa7.37□□□□□ -1.23
ARFGEF1-202ENST00000517955 PAM16Q9Y3D7 125 aa7.37□□□□□ -1.23
ARFGEF1-202ENST00000517955 ZNF815PA8K554 130 aa7.36□□□□□ -1.23
ARFGEF1-202ENST00000517955 TIMM17BO60830 172 aa7.36□□□□□ -1.23
ARFGEF1-202ENST00000517955 PCP2Q8IVA1 136 aa7.36□□□□□ -1.23
ARFGEF1-202ENST00000517955 ERG28Q9UKR5 140 aa7.36□□□□□ -1.23
ARFGEF1-202ENST00000517955 A0A0J9YXY3 114 aa7.35□□□□□ -1.23
ARFGEF1-202ENST00000517955 LOC107984640A0A0U1RRK4 108 aa7.35□□□□□ -1.23
ARFGEF1-202ENST00000517955 NDUFC2-KCTD14E9PQ53 114 aa7.35□□□□□ -1.23
ARFGEF1-202ENST00000517955 C12orf57Q99622 126 aa7.35□□□□□ -1.23
ARFGEF1-202ENST00000517955 TTTY13Q9BZ97 58 aa7.35□□□□□ -1.23
ARFGEF1-202ENST00000517955 DNAH5Q8TE73 4624 aa7.35□□□□□ -1.23
ARFGEF1-202ENST00000517955 GCSHP23434 173 aa7.34□□□□□ -1.23
ARFGEF1-202ENST00000517955 C9orf116Q5BN46 136 aaPredicted RBP7.34□□□□□ -1.23
ARFGEF1-202ENST00000517955 C16orf90A8MZG2 172 aa7.33□□□□□ -1.24
ARFGEF1-202ENST00000517955 CIRBPQ14011 172 aaKnown RBP7.33□□□□□ -1.24
ARFGEF1-202ENST00000517955 LINC00474Q9P2X8 69 aa7.33□□□□□ -1.24
ARFGEF1-202ENST00000517955 PKHD1P08F94 4074 aa7.32□□□□□ -1.24
ARFGEF1-202ENST00000517955 LOC107984156A0A0G2JMH3 177 aa7.32□□□□□ -1.24
ARFGEF1-202ENST00000517955 MEIG1Q5JSS6 88 aa7.32□□□□□ -1.24
ARFGEF1-202ENST00000517955 SLC25A34Q6PIV7 304 aa7.32□□□□□ -1.24
ARFGEF1-202ENST00000517955 Q6ZRP5 223 aa7.32□□□□□ -1.24
ARFGEF1-202ENST00000517955 ARL17AQ8IVW1 177 aa7.32□□□□□ -1.24
ARFGEF1-202ENST00000517955 LITAFQ99732 161 aa7.32□□□□□ -1.24
ARFGEF1-202ENST00000517955 PPDPFQ9H3Y8 114 aa7.32□□□□□ -1.24
ARFGEF1-202ENST00000517955 SMIM13P0DJ93 91 aa7.31□□□□□ -1.24
ARFGEF1-202ENST00000517955 PTTG1IPP53801 180 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 716.7 ms