RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 PRADC1Q9BSG0 188 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 TTTY10Q9BZA0 68 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 TPT1P8Q9HAU6 139 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 BATF3Q9NR55 127 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 RPRMQ9NS64 109 aa1.39□□□□□ -2.19
CPNE3-204ENST00000517862 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
CPNE3-204ENST00000517862 IGKV2D-26A0A0A0MRZ7 120 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 TMEM212A6NML5 194 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 TSTD3H0UI37 97 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 K7EIM0 57 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 GNG7O60262 68 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 SPINK4O60575 86 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 TCL1BO95988 128 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 TRGC2P03986 189 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 MGST1P10620 155 aaKnown RBP1.38□□□□□ -2.19
CPNE3-204ENST00000517862 RPL7P18124 248 aaKnown RBP1.38□□□□□ -2.19
CPNE3-204ENST00000517862 CDK6Q00534 326 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 PIGYQ3MUY2 71 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 RNASE10Q5GAN6 216 aaKnown RBP1.38□□□□□ -2.19
CPNE3-204ENST00000517862 SPAG11AQ6PDA7 123 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 ENHOQ6UWT2 76 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 PP632Q6XCG6 107 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 PYDC1Q8WXC3 89 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 SLC50A1Q9BRV3 221 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 TMEM126AQ9H061 195 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 EPDR1Q9UM22 224 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 DNAJC15Q9Y5T4 150 aa1.38□□□□□ -2.19
CPNE3-204ENST00000517862 A0A087WX48 190 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 C9orf92A6NGG3 77 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 K7ERJ3 54 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 METTL15P1P0C7V9 234 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 UBE2BP63146 152 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 NDUFA5Q16718 116 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 Q5VV11 94 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 HRCT1Q6UXD1 115 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 C7orf65Q6ZTY9 151 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 THEM6Q8WUY1 208 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 CCDC32Q9BV29 185 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 NPCDR1Q9BY65 106 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 C8orf4Q9NR00 106 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 OTORQ9NRC9 128 aa1.37□□□□□ -2.19
CPNE3-204ENST00000517862 IGLC7A0M8Q6 106 aa1.36□□□□□ -2.19
CPNE3-204ENST00000517862 J3QRE1 110 aa1.36□□□□□ -2.19
CPNE3-204ENST00000517862 GADD45GO95257 159 aa1.36□□□□□ -2.19
CPNE3-204ENST00000517862 S100A11P31949 105 aa1.36□□□□□ -2.19
CPNE3-204ENST00000517862 CROCCP2Q86T23 111 aa1.36□□□□□ -2.19
CPNE3-204ENST00000517862 NUP35Q8NFH5 326 aa1.36□□□□□ -2.19
CPNE3-204ENST00000517862 CANT1Q8WVQ1 401 aa1.36□□□□□ -2.19
CPNE3-204ENST00000517862 CST9LQ9H4G1 147 aa1.36□□□□□ -2.19
CPNE3-204ENST00000517862 TIMM17BO60830 172 aa1.35□□□□□ -2.19
CPNE3-204ENST00000517862 FXYD6P3P58550 94 aa1.35□□□□□ -2.19
CPNE3-204ENST00000517862 C9orf116Q5BN46 136 aaPredicted RBP1.35□□□□□ -2.19
CPNE3-204ENST00000517862 IFT20Q8IY31 132 aa1.35□□□□□ -2.19
CPNE3-204ENST00000517862 FAM19A2Q8N3H0 131 aa1.35□□□□□ -2.19
CPNE3-204ENST00000517862 RNASE11Q8TAA1 199 aaKnown RBP1.35□□□□□ -2.19
CPNE3-204ENST00000517862 MAGOHBQ96A72 148 aaKnown RBP1.35□□□□□ -2.19
CPNE3-204ENST00000517862 SLC25A21Q9BQT8 299 aaPredicted RBP1.35□□□□□ -2.19
CPNE3-204ENST00000517862 YIPF3Q9GZM5 350 aa1.35□□□□□ -2.19
CPNE3-204ENST00000517862 C7orf71A4D174 169 aa1.34□□□□□ -2.19
CPNE3-204ENST00000517862 GABARAPH6UMI1 98 aa1.34□□□□□ -2.19
CPNE3-204ENST00000517862 PFDN1O60925 122 aa1.34□□□□□ -2.19
CPNE3-204ENST00000517862 EMX2Q04743 252 aa1.34□□□□□ -2.19
CPNE3-204ENST00000517862 TAS2R4Q9NYW5 299 aa1.34□□□□□ -2.19
CPNE3-204ENST00000517862 ABRACLQ9P1F3 81 aa1.34□□□□□ -2.19
CPNE3-204ENST00000517862 NAT8BQ9UHF3 227 aa1.34□□□□□ -2.19
CPNE3-204ENST00000517862 HSPB11Q9Y547 144 aa1.34□□□□□ -2.19
CPNE3-204ENST00000517862 FXYD6-FXYD2A0A087WZ82 144 aa1.33□□□□□ -2.2
CPNE3-204ENST00000517862 TRDV1A0A1B0GX56 115 aa1.33□□□□□ -2.2
CPNE3-204ENST00000517862 MCRIP1C9JLW8 97 aa1.33□□□□□ -2.2
CPNE3-204ENST00000517862 I3L2K1 104 aa1.33□□□□□ -2.2
CPNE3-204ENST00000517862 ARPC5O15511 151 aa1.33□□□□□ -2.2
CPNE3-204ENST00000517862 BCL2P10415 239 aa1.33□□□□□ -2.2
CPNE3-204ENST00000517862 FABP2P12104 132 aa1.33□□□□□ -2.2
CPNE3-204ENST00000517862 HBBP68871 147 aa1.33□□□□□ -2.2
CPNE3-204ENST00000517862 Q1T7F1 81 aa1.33□□□□□ -2.2
CPNE3-204ENST00000517862 KRTAP26-1Q6PEX3 210 aa1.33□□□□□ -2.2
CPNE3-204ENST00000517862 A0A087WWC5 75 aa1.32□□□□□ -2.2
CPNE3-204ENST00000517862 GEMIN2O14893 280 aaKnown RBP1.32□□□□□ -2.2
CPNE3-204ENST00000517862 CST7O76096 145 aa1.32□□□□□ -2.2
CPNE3-204ENST00000517862 ANGP03950 147 aaKnown RBP1.32□□□□□ -2.2
CPNE3-204ENST00000517862 GPX2P18283 190 aa1.32□□□□□ -2.2
CPNE3-204ENST00000517862 RPL37P61927 97 aaKnown RBP1.32□□□□□ -2.2
CPNE3-204ENST00000517862 SNRPGP62308 76 aaKnown RBP1.32□□□□□ -2.2
CPNE3-204ENST00000517862 HIST1H1AQ02539 215 aaPredicted RBP1.32□□□□□ -2.2
CPNE3-204ENST00000517862 WT1-ASQ06250 92 aa1.32□□□□□ -2.2
CPNE3-204ENST00000517862 PATE2Q6UY27 113 aa1.32□□□□□ -2.2
CPNE3-204ENST00000517862 PRR15Q8IV56 129 aa1.32□□□□□ -2.2
CPNE3-204ENST00000517862 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.32□□□□□ -2.2
CPNE3-204ENST00000517862 OR2T35Q8NGX2 323 aa1.32□□□□□ -2.2
CPNE3-204ENST00000517862 OTOSQ8NHW6 89 aa1.32□□□□□ -2.2
CPNE3-204ENST00000517862 PP6455Q8WZ26 134 aa1.32□□□□□ -2.2
CPNE3-204ENST00000517862 ZNF625Q96I27 306 aaPredicted RBP1.32□□□□□ -2.2
CPNE3-204ENST00000517862 LAMTOR3Q9UHA4 124 aa1.32□□□□□ -2.2
CPNE3-204ENST00000517862 LAMTOR2Q9Y2Q5 125 aa1.32□□□□□ -2.2
CPNE3-204ENST00000517862 TRBV20-1A0A075B6N2 111 aa1.31□□□□□ -2.2
CPNE3-204ENST00000517862 TRAV12-3A0A0B4J271 114 aa1.31□□□□□ -2.2
CPNE3-204ENST00000517862 ARPC4P59998 168 aa1.31□□□□□ -2.2
CPNE3-204ENST00000517862 HMGN3Q15651 99 aa1.31□□□□□ -2.2
CPNE3-204ENST00000517862 SPANXN5Q5MJ07 72 aa1.31□□□□□ -2.2
CPNE3-204ENST00000517862 CLPSL2Q6UWE3 100 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms