RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 C2orf48Q96LS8 159 aa1.44□□□□□ -2.18
RNU1-40P-201ENST00000516816 FAM218AQ96MZ4 157 aa1.44□□□□□ -2.18
RNU1-40P-201ENST00000516816 LINC00167Q96N53 147 aa1.44□□□□□ -2.18
RNU1-40P-201ENST00000516816 KLK12Q9UKR0 248 aa1.44□□□□□ -2.18
RNU1-40P-201ENST00000516816 LAMA1P25391 3075 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 IGLV10-54A0A075B6I4 117 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 A0A096LPF7 62 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 LOC100131303A0A0U1RQF7 123 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 FAM236DA0A1B0GTK5 79 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 ETDCA0A1B0GVM5 59 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 KRTAP23-1A1A580 65 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 ZNF73O43830 326 aaPredicted RBP1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 FAM236CP0DP71 79 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 MP68P56378 58 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 LINC01547P58512 204 aaPredicted RBP1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 UNQ6190/PRO20217Q6UXQ8 127 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 Q6ZQT0 140 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 Q6ZQY7 126 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 FAM19A1Q7Z5A9 133 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 C20orf197Q8N268 126 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 LINC00612Q8N6U2 182 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 MPLKIPQ8TAP9 179 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 BBC3Q96PG8 261 aaPredicted RBP1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 C19orf73Q9NVV2 129 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 Q9UF83 564 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 UNC80Q8N2C7 3258 aa1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 LAMA2P24043 3122 aaKnown RBP1.43□□□□□ -2.18
RNU1-40P-201ENST00000516816 TRIOO75962 3097 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 A0A096LNT2 108 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 RPL37AP8A6NKH3 93 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 J3QKU1 62 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 IGLV6-57P01721 117 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 PRR3P79522 188 aaKnown RBP1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 SYCNQ0VAF6 134 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 KLKP1Q107X0 134 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 DEFB135Q30KP9 77 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 CLPSL2Q6UWE3 100 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 Q6ZVQ6 151 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 Q8N3U1 123 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 ZNF843Q8N446 348 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 C3orf56Q8N813 242 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 DEFB105AQ8NG35 78 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 SPATA3Q8NHX4 192 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 SMCR5Q8TEV8 140 aa1.42□□□□□ -2.18
RNU1-40P-201ENST00000516816 ZFHX2Q9C0A1 2572 aaPredicted RBP1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 PIEZO2Q9H5I5 2752 aa1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 PRRC2CQ9Y520 2896 aaKnown RBP1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 IGKV2D-24A0A075B6R9 120 aa1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 PLAC8L1A1L4L8 177 aa1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 GIG44P09565 113 aaPredicted RBP1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 PLA2G2AP14555 144 aa1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 ELOF1P60002 83 aaKnown RBP1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 UBE2BP63146 152 aa1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 KIAA0087Q14695 138 aa1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 C14orf177Q52M58 125 aa1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 KPRPQ5T749 579 aaPredicted RBP1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 WFDC11Q8NEX6 87 aa1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 C11orf45Q8TAV5 145 aa1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 PRR34Q9NV39 138 aa1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 PLA2G2DQ9UNK4 145 aa1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 CDH23Q9H251 3354 aa1.41□□□□□ -2.18
RNU1-40P-201ENST00000516816 CFAP54Q96N23 3096 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 TNRC18O15417 2968 aaPredicted RBP1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 NBASA2RRP1 2371 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 A0A087WVE0 104 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 DEFB131BA0A096LNP1 70 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 A0A0A0MQY5 61 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 TRAV10A0A0B4J240 114 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 TRBV7-4A0A0J9YYF1 115 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 hDV103S1A0JD37 113 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 H3BPC8 53 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 PRYO14603 147 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 PSCAO43653 123 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 CDK2AP2O75956 126 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 PRB1P04280 392 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 KRTAP10-9P60411 292 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 C9orf116Q5BN46 136 aaPredicted RBP1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 WFDC9Q8NEX5 89 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 TMEM254Q8TBM7 123 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 KCNQ1DNQ9H478 68 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 XAGE1AQ9HD64 81 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 ESM1Q9NQ30 184 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 FRYQ5TBA9 3013 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 NOTCH3Q9UM47 2321 aa1.4□□□□□ -2.19
RNU1-40P-201ENST00000516816 XIRP2A4UGR9 3374 aa1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 ANKRD17O75179 2603 aaKnown RBP1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 GVINP1Q7Z2Y8 2422 aa1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 ABCA2Q9BZC7 2435 aa1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 DEFB4AO15263 64 aa1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 TLX1NBP0CAT3 122 aa1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 NANOS2P60321 138 aaKnown RBP1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 LINC01556Q5JQF7 62 aa1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 C1orf137Q5JT78 98 aa1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 C10orf25Q5T742 122 aa1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 REG3GQ6UW15 175 aa1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 HRCT1Q6UXD1 115 aa1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 Q6ZRU5 148 aa1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 PRR26Q8N8Z3 221 aa1.39□□□□□ -2.19
RNU1-40P-201ENST00000516816 B9D2Q9BPU9 175 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms