RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 PAEPP09466 180 aa-4.9□□□□□ -3.19
SNORA40.13-201ENST00000516379 COPZ2Q9P299 210 aa-4.9□□□□□ -3.19
SNORA40.13-201ENST00000516379 NLRP1Q9C000 1473 aa-4.9□□□□□ -3.19
SNORA40.13-201ENST00000516379 C5orf38Q86SI9 138 aa-4.91□□□□□ -3.2
SNORA40.13-201ENST00000516379 FAIMQ9NVQ4 179 aa-4.91□□□□□ -3.2
SNORA40.13-201ENST00000516379 EDC4Q6P2E9 1401 aaKnown RBP-4.91□□□□□ -3.2
SNORA40.13-201ENST00000516379 TMEM2Q9UHN6 1383 aa-4.91□□□□□ -3.2
SNORA40.13-201ENST00000516379 A0A1B0GU69 56 aa-4.92□□□□□ -3.2
SNORA40.13-201ENST00000516379 KRTAP19-6Q3LI70 58 aa-4.92□□□□□ -3.2
SNORA40.13-201ENST00000516379 TMEM244Q5VVB8 128 aa-4.92□□□□□ -3.2
SNORA40.13-201ENST00000516379 MGST2Q99735 147 aa-4.92□□□□□ -3.2
SNORA40.13-201ENST00000516379 SCN11AQ9UI33 1791 aa-4.93□□□□□ -3.2
SNORA40.13-201ENST00000516379 RRAS2P62070 204 aaPredicted RBP-4.93□□□□□ -3.2
SNORA40.13-201ENST00000516379 OVOS2A0A0G2JMS6 1433 aa-4.94□□□□□ -3.2
SNORA40.13-201ENST00000516379 HIST1H1DP16402 221 aaKnown RBP-4.94□□□□□ -3.2
SNORA40.13-201ENST00000516379 TCTAP57738 103 aa-4.94□□□□□ -3.2
SNORA40.13-201ENST00000516379 MRPL54Q6P161 138 aaKnown RBP-4.94□□□□□ -3.2
SNORA40.13-201ENST00000516379 NXT2Q9NPJ8 142 aaKnown RBP-4.94□□□□□ -3.2
SNORA40.13-201ENST00000516379 CRYBG3Q68DQ2 2970 aa-4.94□□□□□ -3.2
SNORA40.13-201ENST00000516379 NUP188Q5SRE5 1749 aa-4.94□□□□□ -3.2
SNORA40.13-201ENST00000516379 A0A1W2PRE2 83 aa-4.95□□□□□ -3.2
SNORA40.13-201ENST00000516379 DPM2O94777 84 aa-4.95□□□□□ -3.2
SNORA40.13-201ENST00000516379 TPM3P06753 285 aa-4.95□□□□□ -3.2
SNORA40.13-201ENST00000516379 TMEM78Q5T7P6 136 aa-4.95□□□□□ -3.2
SNORA40.13-201ENST00000516379 CTAGE3PQ8IX95 158 aa-4.95□□□□□ -3.2
SNORA40.13-201ENST00000516379 SPTSSAQ969W0 71 aa-4.95□□□□□ -3.2
SNORA40.13-201ENST00000516379 SAR1AQ9NR31 198 aa-4.95□□□□□ -3.2
SNORA40.13-201ENST00000516379 EIF3AQ14152 1382 aaKnown RBP-4.95□□□□□ -3.2
SNORA40.13-201ENST00000516379 SYNJ1O43426 1573 aa-4.95□□□□□ -3.2
SNORA40.13-201ENST00000516379 SNCGO76070 127 aa-4.96□□□□□ -3.2
SNORA40.13-201ENST00000516379 NDUFB6O95139 128 aa-4.96□□□□□ -3.2
SNORA40.13-201ENST00000516379 LOC285095A0A1B0GVY8 99 aa-4.97□□□□□ -3.21
SNORA40.13-201ENST00000516379 TMEM238C9JI98 176 aa-4.97□□□□□ -3.21
SNORA40.13-201ENST00000516379 M0R129 80 aa-4.97□□□□□ -3.21
SNORA40.13-201ENST00000516379 SNCAP37840 140 aa-4.97□□□□□ -3.21
SNORA40.13-201ENST00000516379 WHAMMP3Q1A5X7 153 aa-4.97□□□□□ -3.21
SNORA40.13-201ENST00000516379 TAC4Q86UU9 113 aa-4.97□□□□□ -3.21
SNORA40.13-201ENST00000516379 CDK5RAP2Q96SN8 1893 aa-4.98□□□□□ -3.21
SNORA40.13-201ENST00000516379 PARVGQ9HBI0 331 aa-4.98□□□□□ -3.21
SNORA40.13-201ENST00000516379 ZNF518AQ6AHZ1 1483 aa-4.99□□□□□ -3.21
SNORA40.13-201ENST00000516379 ANKRD30AQ9BXX3 1397 aa-4.99□□□□□ -3.21
SNORA40.13-201ENST00000516379 SPTY2D1-AS1A0A0U1RR47 76 aa-4.99□□□□□ -3.21
SNORA40.13-201ENST00000516379 FAM223AQ8IWN6 122 aa-4.99□□□□□ -3.21
SNORA40.13-201ENST00000516379 MAGOHBQ96A72 148 aaKnown RBP-4.99□□□□□ -3.21
SNORA40.13-201ENST00000516379 SCN7AQ01118 1682 aa-4.99□□□□□ -3.21
SNORA40.13-201ENST00000516379 TPM4P67936 248 aa-5□□□□□ -3.21
SNORA40.13-201ENST00000516379 OR8I2Q8N0Y5 310 aa-5□□□□□ -3.21
SNORA40.13-201ENST00000516379 MNS1Q8NEH6 495 aa-5□□□□□ -3.21
SNORA40.13-201ENST00000516379 TIAM2Q8IVF5 1701 aa-5□□□□□ -3.21
SNORA40.13-201ENST00000516379 TCHHQ07283 1943 aa-5.01□□□□□ -3.21
SNORA40.13-201ENST00000516379 CDKN2CP42773 168 aa-5.01□□□□□ -3.21
SNORA40.13-201ENST00000516379 MYOZ3Q8TDC0 251 aa-5.01□□□□□ -3.21
SNORA40.13-201ENST00000516379 TSLPQ969D9 159 aa-5.01□□□□□ -3.21
SNORA40.13-201ENST00000516379 UBE2D4Q9Y2X8 147 aa-5.01□□□□□ -3.21
SNORA40.13-201ENST00000516379 V9GYQ6 96 aa-5.01□□□□□ -3.21
SNORA40.13-201ENST00000516379 SMG6Q86US8 1419 aaKnown RBP-5.02□□□□□ -3.21
SNORA40.13-201ENST00000516379 REEP5Q00765 189 aa-5.02□□□□□ -3.21
SNORA40.13-201ENST00000516379 MYO15AQ9UKN7 3530 aa-5.02□□□□□ -3.21
SNORA40.13-201ENST00000516379 SYNMO15061 1565 aa-5.03□□□□□ -3.21
SNORA40.13-201ENST00000516379 NDUFA3O95167 84 aa-5.03□□□□□ -3.21
SNORA40.13-201ENST00000516379 CEP19Q96LK0 163 aa-5.03□□□□□ -3.21
SNORA40.13-201ENST00000516379 SPEF2Q9C093 1822 aa-5.04□□□□□ -3.22
SNORA40.13-201ENST00000516379 CTXN2P0C2S0 81 aa-5.04□□□□□ -3.22
SNORA40.13-201ENST00000516379 SERPINB1P30740 379 aa-5.04□□□□□ -3.22
SNORA40.13-201ENST00000516379 NMSQ5H8A3 153 aa-5.04□□□□□ -3.22
SNORA40.13-201ENST00000516379 C6orf201Q7Z4U5 140 aa-5.04□□□□□ -3.22
SNORA40.13-201ENST00000516379 OR9Q1Q8NGQ5 310 aa-5.04□□□□□ -3.22
SNORA40.13-201ENST00000516379 PPP1R14BQ96C90 147 aa-5.04□□□□□ -3.22
SNORA40.13-201ENST00000516379 TMEM191AQ9H0A3 160 aa-5.04□□□□□ -3.22
SNORA40.13-201ENST00000516379 MAPKBP1O60336 1514 aa-5.04□□□□□ -3.22
SNORA40.13-201ENST00000516379 PFDN1O60925 122 aa-5.05□□□□□ -3.22
SNORA40.13-201ENST00000516379 ARL2-SNX15V9GYD0 113 aa-5.05□□□□□ -3.22
SNORA40.13-201ENST00000516379 ADGRL2O95490 1459 aa-5.06□□□□□ -3.22
SNORA40.13-201ENST00000516379 CFAP54Q96N23 3096 aa-5.06□□□□□ -3.22
SNORA40.13-201ENST00000516379 FAM223BA6NKX1 122 aa-5.06□□□□□ -3.22
SNORA40.13-201ENST00000516379 NCS1P62166 190 aa-5.06□□□□□ -3.22
SNORA40.13-201ENST00000516379 TCTE3Q8IZS6 198 aa-5.06□□□□□ -3.22
SNORA40.13-201ENST00000516379 PSMG3Q9BT73 122 aaPredicted RBP-5.06□□□□□ -3.22
SNORA40.13-201ENST00000516379 ABCC10Q5T3U5 1492 aa-5.07□□□□□ -3.22
SNORA40.13-201ENST00000516379 PREX1Q8TCU6 1659 aa-5.08□□□□□ -3.22
SNORA40.13-201ENST00000516379 MAGI2Q86UL8 1455 aa-5.08□□□□□ -3.22
SNORA40.13-201ENST00000516379 CEP152O94986 1710 aa-5.09□□□□□ -3.22
SNORA40.13-201ENST00000516379 FAM236AA0A1B0GUQ0 79 aa-5.09□□□□□ -3.22
SNORA40.13-201ENST00000516379 FAM236BA0A1B0GV22 79 aa-5.09□□□□□ -3.22
SNORA40.13-201ENST00000516379 HIST1H1AQ02539 215 aaPredicted RBP-5.09□□□□□ -3.22
SNORA40.13-201ENST00000516379 RGS21Q2M5E4 152 aa-5.09□□□□□ -3.22
SNORA40.13-201ENST00000516379 COX6B2Q6YFQ2 88 aa-5.09□□□□□ -3.22
SNORA40.13-201ENST00000516379 WFDC9Q8NEX5 89 aa-5.09□□□□□ -3.22
SNORA40.13-201ENST00000516379 DMDP11532 3685 aa-5.1□□□□□ -3.23
SNORA40.13-201ENST00000516379 TNP1P09430 55 aa-5.1□□□□□ -3.23
SNORA40.13-201ENST00000516379 EHBP1L1Q8N3D4 1523 aa-5.1□□□□□ -3.23
SNORA40.13-201ENST00000516379 LINC00846Q9NV44 126 aa-5.1□□□□□ -3.23
SNORA40.13-201ENST00000516379 PLXNC1O60486 1568 aa-5.11□□□□□ -3.23
SNORA40.13-201ENST00000516379 SCTP09683 121 aa-5.11□□□□□ -3.23
SNORA40.13-201ENST00000516379 PTRHD1Q6GMV3 140 aaKnown RBP-5.11□□□□□ -3.23
SNORA40.13-201ENST00000516379 FYCO1Q9BQS8 1478 aa-5.12□□□□□ -3.23
SNORA40.13-201ENST00000516379 A0A1B0GWA3 101 aa-5.12□□□□□ -3.23
SNORA40.13-201ENST00000516379 TNFSF15O95150 251 aa-5.12□□□□□ -3.23
SNORA40.13-201ENST00000516379 C9orf153Q5TBE3 101 aa-5.12□□□□□ -3.23
SNORA40.13-201ENST00000516379 CUX1P39880 1505 aa-5.13□□□□□ -3.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms