RNA–Protein interactions for RNA: ENST00000515675.1

AFP-207, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 317 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-207ENST00000515675 PIN1P1O15428 100 aa0.76□□□□□ -2.29
AFP-207ENST00000515675 LEPROTL1O95214 131 aa0.76□□□□□ -2.29
AFP-207ENST00000515675 PRB3Q04118 309 aaPredicted RBP0.76□□□□□ -2.29
AFP-207ENST00000515675 CUX1P39880 1505 aa0.75□□□□□ -2.29
AFP-207ENST00000515675 HMGN2P05204 90 aaKnown RBP0.75□□□□□ -2.29
AFP-207ENST00000515675 SPINK7P58062 85 aa0.75□□□□□ -2.29
AFP-207ENST00000515675 SNRPFP62306 86 aaKnown RBP0.75□□□□□ -2.29
AFP-207ENST00000515675 HMGN3Q15651 99 aa0.75□□□□□ -2.29
AFP-207ENST00000515675 BVES-AS1Q5T3Y7 98 aa0.75□□□□□ -2.29
AFP-207ENST00000515675 TMEM263Q8WUH6 116 aaKnown RBP0.75□□□□□ -2.29
AFP-207ENST00000515675 COL14A1Q05707 1796 aaKnown RBP0.75□□□□□ -2.29
AFP-207ENST00000515675 RGPD1P0DJD0 1748 aa0.75□□□□□ -2.29
AFP-207ENST00000515675 PPRC1Q5VV67 1664 aaKnown RBP0.75□□□□□ -2.29
AFP-207ENST00000515675 PAPPAQ13219 1627 aa0.75□□□□□ -2.29
AFP-207ENST00000515675 CCDC88BA6NC98 1476 aa0.74□□□□□ -2.29
AFP-207ENST00000515675 NAV3Q8IVL0 2385 aa0.74□□□□□ -2.29
AFP-207ENST00000515675 TRBV6-1A0A0K0K1D8 114 aa0.74□□□□□ -2.29
AFP-207ENST00000515675 D6R8Y8 96 aa0.74□□□□□ -2.29
AFP-207ENST00000515675 IGLC2P0DOY2 106 aa0.74□□□□□ -2.29
AFP-207ENST00000515675 IGLC3P0DOY3 106 aa0.74□□□□□ -2.29
AFP-207ENST00000515675 SPATA8Q6RVD6 105 aa0.74□□□□□ -2.29
AFP-207ENST00000515675 LINC00643Q86TS7 51 aa0.74□□□□□ -2.29
AFP-207ENST00000515675 MUSTN1Q8IVN3 82 aa0.74□□□□□ -2.29
AFP-207ENST00000515675 RGPD2P0DJD1 1756 aa0.74□□□□□ -2.29
AFP-207ENST00000515675 KIAA0556O60303 1618 aa0.74□□□□□ -2.29
AFP-207ENST00000515675 KCPQ6ZWJ8 1503 aa0.74□□□□□ -2.29
AFP-207ENST00000515675 NCOA2Q15596 1464 aa0.73□□□□□ -2.29
AFP-207ENST00000515675 ZNF831Q5JPB2 1677 aa0.73□□□□□ -2.29
AFP-207ENST00000515675 IQCF6A8MYZ5 107 aa0.73□□□□□ -2.29
AFP-207ENST00000515675 H0Y9P7 68 aa0.73□□□□□ -2.29
AFP-207ENST00000515675 GNGT1P63211 74 aa0.73□□□□□ -2.29
AFP-207ENST00000515675 ADIRFQ15847 76 aa0.73□□□□□ -2.29
AFP-207ENST00000515675 C6orf201Q7Z4U5 140 aa0.73□□□□□ -2.29
AFP-207ENST00000515675 ZNF462Q96JM2 2506 aa0.73□□□□□ -2.29
AFP-207ENST00000515675 A0A0G2JMZ2 1700 aa0.72□□□□□ -2.29
AFP-207ENST00000515675 DNMBPQ6XZF7 1577 aa0.72□□□□□ -2.29
AFP-207ENST00000515675 CFAP74Q9C0B2 1584 aa0.72□□□□□ -2.29
AFP-207ENST00000515675 A0A1B0GU69 56 aa0.72□□□□□ -2.29
AFP-207ENST00000515675 ACYP1P07311 99 aa0.72□□□□□ -2.29
AFP-207ENST00000515675 SMIM11AP58511 58 aa0.72□□□□□ -2.29
AFP-207ENST00000515675 PRO0255Q9UI72 69 aa0.72□□□□□ -2.29
AFP-207ENST00000515675 JMJD1CQ15652 2540 aa0.72□□□□□ -2.29
AFP-207ENST00000515675 ZNF469Q96JG9 3925 aaPredicted RBP0.71□□□□□ -2.3
AFP-207ENST00000515675 TSC2P49815 1807 aa0.71□□□□□ -2.3
AFP-207ENST00000515675 ABCA8O94911 1581 aa0.71□□□□□ -2.3
AFP-207ENST00000515675 FXYD6-FXYD2A0A087WZ82 144 aa0.71□□□□□ -2.3
AFP-207ENST00000515675 MYMXA0A1B0GTQ4 84 aa0.71□□□□□ -2.3
AFP-207ENST00000515675 LINC00959A0A1B0GUT2 108 aa0.71□□□□□ -2.3
AFP-207ENST00000515675 KANTRA0A1W2PQU2 76 aa0.71□□□□□ -2.3
AFP-207ENST00000515675 COX6A2Q02221 97 aa0.71□□□□□ -2.3
AFP-207ENST00000515675 DEFB121Q5J5C9 76 aa0.71□□□□□ -2.3
AFP-207ENST00000515675 UBE2D4Q9Y2X8 147 aa0.71□□□□□ -2.3
AFP-207ENST00000515675 FMN2Q9NZ56 1722 aa0.71□□□□□ -2.3
AFP-207ENST00000515675 LRRC9Q6ZRR7 1453 aa0.71□□□□□ -2.3
AFP-207ENST00000515675 RGPD8O14715 1765 aaPredicted RBP0.7□□□□□ -2.3
AFP-207ENST00000515675 RGPD5Q99666 1765 aa0.7□□□□□ -2.3
AFP-207ENST00000515675 H3BUT2 72 aa0.7□□□□□ -2.3
AFP-207ENST00000515675 S100A3P33764 101 aa0.7□□□□□ -2.3
AFP-207ENST00000515675 C18orf32Q8TCD1 76 aa0.7□□□□□ -2.3
AFP-207ENST00000515675 ASH1LQ9NR48 2969 aaKnown RBP0.7□□□□□ -2.3
AFP-207ENST00000515675 IQGAP3Q86VI3 1631 aa0.7□□□□□ -2.3
AFP-207ENST00000515675 ANKARQ7Z5J8 1434 aa0.7□□□□□ -2.3
AFP-207ENST00000515675 POLR1AO95602 1720 aaPredicted RBP0.69□□□□□ -2.3
AFP-207ENST00000515675 QSER1Q2KHR3 1735 aa0.69□□□□□ -2.3
AFP-207ENST00000515675 MYO5CQ9NQX4 1742 aa0.69□□□□□ -2.3
AFP-207ENST00000515675 ABCC1P33527 1531 aa0.69□□□□□ -2.3
AFP-207ENST00000515675 PIK3C2BO00750 1634 aa0.69□□□□□ -2.3
AFP-207ENST00000515675 Q5BKY6 102 aa0.69□□□□□ -2.3
AFP-207ENST00000515675 TP53AIP1Q9HCN2 124 aa0.69□□□□□ -2.3
AFP-207ENST00000515675 ARFGEF2Q9Y6D5 1785 aa0.69□□□□□ -2.3
AFP-207ENST00000515675 URB1O60287 2271 aaKnown RBP0.69□□□□□ -2.3
AFP-207ENST00000515675 SAMD9Q5K651 1589 aa0.69□□□□□ -2.3
AFP-207ENST00000515675 SLIT1O75093 1534 aa0.69□□□□□ -2.3
AFP-207ENST00000515675 LRRC7Q96NW7 1537 aa0.69□□□□□ -2.3
AFP-207ENST00000515675 TULP4Q9NRJ4 1543 aa0.69□□□□□ -2.3
AFP-207ENST00000515675 ATP7BP35670 1465 aa0.68□□□□□ -2.3
AFP-207ENST00000515675 CCDC141Q6ZP82 1450 aa0.68□□□□□ -2.3
AFP-207ENST00000515675 PTPN23Q9H3S7 1636 aa0.68□□□□□ -2.3
AFP-207ENST00000515675 BIVM-ERCC5R4GMW8 1640 aa0.68□□□□□ -2.3
AFP-207ENST00000515675 SCN11AQ9UI33 1791 aa0.68□□□□□ -2.3
AFP-207ENST00000515675 A0A0D9SFI3 127 aa0.68□□□□□ -2.3
AFP-207ENST00000515675 TRBV7-4A0A0J9YYF1 115 aa0.68□□□□□ -2.3
AFP-207ENST00000515675 I3L2K1 104 aa0.68□□□□□ -2.3
AFP-207ENST00000515675 CFDP00746 253 aaPredicted RBP0.68□□□□□ -2.3
AFP-207ENST00000515675 PLGLAQ15195 96 aa0.68□□□□□ -2.3
AFP-207ENST00000515675 UBR3Q6ZT12 1888 aa0.68□□□□□ -2.3
AFP-207ENST00000515675 SMCO4Q9NRQ5 59 aa0.68□□□□□ -2.3
AFP-207ENST00000515675 CEP170BQ9Y4F5 1589 aaPredicted RBP0.67□□□□□ -2.3
AFP-207ENST00000515675 CEBPZOSA8MTT3 80 aa0.67□□□□□ -2.3
AFP-207ENST00000515675 CNFNQ9BYD5 112 aa0.67□□□□□ -2.3
AFP-207ENST00000515675 CD163L1Q9NR16 1453 aa0.67□□□□□ -2.3
AFP-207ENST00000515675 LRRC37AA6NMS7 1700 aa0.67□□□□□ -2.3
AFP-207ENST00000515675 DEFB112Q30KQ8 113 aa0.66□□□□□ -2.3
AFP-207ENST00000515675 CRIPTQ9P021 101 aa0.66□□□□□ -2.3
AFP-207ENST00000515675 PLCE1Q9P212 2302 aa0.66□□□□□ -2.3
AFP-207ENST00000515675 TIAM2Q8IVF5 1701 aa0.66□□□□□ -2.3
AFP-207ENST00000515675 DOT1LQ8TEK3 1739 aa0.66□□□□□ -2.3
AFP-207ENST00000515675 BCORQ6W2J9 1755 aa0.65□□□□□ -2.3
AFP-207ENST00000515675 UGGT2Q9NYU1 1516 aa0.65□□□□□ -2.31
AFP-207ENST00000515675 PDCD5O14737 125 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms