RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 OXTP01178 125 aa9.31□□□□□ -0.92
HMGCLL1-209ENST00000515546 FABP4P15090 132 aa9.31□□□□□ -0.92
HMGCLL1-209ENST00000515546 PTTG1IPP53801 180 aa9.31□□□□□ -0.92
HMGCLL1-209ENST00000515546 LINC00242Q5T6M2 205 aa9.31□□□□□ -0.92
HMGCLL1-209ENST00000515546 C7orf33Q8WU49 177 aa9.31□□□□□ -0.92
HMGCLL1-209ENST00000515546 ORAOV1Q8WV07 137 aa9.31□□□□□ -0.92
HMGCLL1-209ENST00000515546 A0A087WZ39 114 aa9.3□□□□□ -0.92
HMGCLL1-209ENST00000515546 F8WDY8 70 aa9.3□□□□□ -0.92
HMGCLL1-209ENST00000515546 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.3□□□□□ -0.92
HMGCLL1-209ENST00000515546 ATP5LO75964 103 aa9.3□□□□□ -0.92
HMGCLL1-209ENST00000515546 UBE2D1P51668 147 aa9.3□□□□□ -0.92
HMGCLL1-209ENST00000515546 RNF151Q2KHN1 245 aa9.3□□□□□ -0.92
HMGCLL1-209ENST00000515546 TEX43Q6ZNM6 134 aa9.3□□□□□ -0.92
HMGCLL1-209ENST00000515546 IFI27L1Q96BM0 104 aa9.3□□□□□ -0.92
HMGCLL1-209ENST00000515546 AMELXQ99217 191 aa9.3□□□□□ -0.92
HMGCLL1-209ENST00000515546 HIST1H2BLQ99880 126 aa9.3□□□□□ -0.92
HMGCLL1-209ENST00000515546 PACRGQ96M98 296 aaPredicted RBP9.29□□□□□ -0.92
HMGCLL1-209ENST00000515546 MRPL35Q9NZE8 188 aaKnown RBP9.29□□□□□ -0.92
HMGCLL1-209ENST00000515546 PRR3P79522 188 aaKnown RBP9.28□□□□□ -0.92
HMGCLL1-209ENST00000515546 Q6ZN92 141 aa9.28□□□□□ -0.92
HMGCLL1-209ENST00000515546 FAM19A3Q7Z5A8 133 aa9.28□□□□□ -0.92
HMGCLL1-209ENST00000515546 C2orf88Q9BSF0 95 aa9.28□□□□□ -0.92
HMGCLL1-209ENST00000515546 HSPB8Q9UJY1 196 aa9.28□□□□□ -0.92
HMGCLL1-209ENST00000515546 LINC01561Q8N1V8 128 aa9.27□□□□□ -0.93
HMGCLL1-209ENST00000515546 VCX2Q9H322 139 aa9.27□□□□□ -0.93
HMGCLL1-209ENST00000515546 CST9LQ9H4G1 147 aa9.27□□□□□ -0.93
HMGCLL1-209ENST00000515546 S100A2P29034 98 aa9.26□□□□□ -0.93
HMGCLL1-209ENST00000515546 GAGE2BQ13066 116 aa9.26□□□□□ -0.93
HMGCLL1-209ENST00000515546 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
HMGCLL1-209ENST00000515546 PMVKQ15126 192 aa9.26□□□□□ -0.93
HMGCLL1-209ENST00000515546 A0A0J9YXV3 536 aa9.25□□□□□ -0.93
HMGCLL1-209ENST00000515546 NDUFA1O15239 70 aa9.25□□□□□ -0.93
HMGCLL1-209ENST00000515546 PAPPA-AS1Q5QFB9 102 aa9.25□□□□□ -0.93
HMGCLL1-209ENST00000515546 C10orf25Q5T742 122 aa9.25□□□□□ -0.93
HMGCLL1-209ENST00000515546 HMCN2Q8NDA2 5059 aa9.24□□□□□ -0.93
HMGCLL1-209ENST00000515546 C3orf79P0CE67 100 aa9.24□□□□□ -0.93
HMGCLL1-209ENST00000515546 RPL18AQ02543 176 aaKnown RBP9.24□□□□□ -0.93
HMGCLL1-209ENST00000515546 C6orf48Q9UBA6 75 aa9.24□□□□□ -0.93
HMGCLL1-209ENST00000515546 TRAV12-1A0A0B4J245 112 aa9.23□□□□□ -0.93
HMGCLL1-209ENST00000515546 A0A1W2PNN7 141 aa9.23□□□□□ -0.93
HMGCLL1-209ENST00000515546 H0Y8G0 127 aa9.23□□□□□ -0.93
HMGCLL1-209ENST00000515546 SYS1-DBNDD2H3BUS1 97 aa9.23□□□□□ -0.93
HMGCLL1-209ENST00000515546 TLX1NBP0CAT3 122 aa9.23□□□□□ -0.93
HMGCLL1-209ENST00000515546 ODF1Q14990 250 aa9.23□□□□□ -0.93
HMGCLL1-209ENST00000515546 UNQ6190/PRO20217Q6UXQ8 127 aa9.23□□□□□ -0.93
HMGCLL1-209ENST00000515546 MAP1LC3CQ9BXW4 147 aa9.23□□□□□ -0.93
HMGCLL1-209ENST00000515546 KRTDAPP60985 99 aa9.22□□□□□ -0.93
HMGCLL1-209ENST00000515546 IGLC3P0DOY3 106 aa9.21□□□□□ -0.94
HMGCLL1-209ENST00000515546 C9orf116Q5BN46 136 aaPredicted RBP9.21□□□□□ -0.94
HMGCLL1-209ENST00000515546 Q6ZRP5 223 aa9.21□□□□□ -0.94
HMGCLL1-209ENST00000515546 CHTOPQ9Y3Y2 248 aaKnown RBP9.21□□□□□ -0.94
HMGCLL1-209ENST00000515546 TRBV30A0A0K0K1B3 111 aa9.2□□□□□ -0.94
HMGCLL1-209ENST00000515546 MT1HL1P0DM35 61 aa9.2□□□□□ -0.94
HMGCLL1-209ENST00000515546 HERVK_113P63121 156 aa9.2□□□□□ -0.94
HMGCLL1-209ENST00000515546 SEC11AP67812 179 aa9.2□□□□□ -0.94
HMGCLL1-209ENST00000515546 PMCHL2Q9BQD1 86 aa9.2□□□□□ -0.94
HMGCLL1-209ENST00000515546 TNXBP22105 4242 aa9.2□□□□□ -0.94
HMGCLL1-209ENST00000515546 TINCRA0A1B0GVN0 87 aa9.19□□□□□ -0.94
HMGCLL1-209ENST00000515546 C11orf86A6NJI1 115 aa9.19□□□□□ -0.94
HMGCLL1-209ENST00000515546 F8VRH5 84 aa9.19□□□□□ -0.94
HMGCLL1-209ENST00000515546 LINC01545Q5VT33 79 aa9.19□□□□□ -0.94
HMGCLL1-209ENST00000515546 PET117Q6UWS5 81 aa9.19□□□□□ -0.94
HMGCLL1-209ENST00000515546 C2orf82Q6UX34 121 aa9.19□□□□□ -0.94
HMGCLL1-209ENST00000515546 IGLV5-45A0A087WSX0 123 aa9.18□□□□□ -0.94
HMGCLL1-209ENST00000515546 Q8IZM0 81 aa9.18□□□□□ -0.94
HMGCLL1-209ENST00000515546 CDKN2A-AS1Q9UH64 79 aa9.18□□□□□ -0.94
HMGCLL1-209ENST00000515546 GEMIN7Q9H840 131 aaKnown RBP9.17□□□□□ -0.94
HMGCLL1-209ENST00000515546 NDUFC2-KCTD14E9PQ53 114 aa9.16□□□□□ -0.94
HMGCLL1-209ENST00000515546 ZNF22P17026 224 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-209ENST00000515546 FAM168BA1KXE4 195 aa9.15□□□□□ -0.94
HMGCLL1-209ENST00000515546 PRSS2P07478 247 aa9.15□□□□□ -0.94
HMGCLL1-209ENST00000515546 SRSF9Q13242 221 aaKnown RBP eCLIP9.15□□□□□ -0.94
HMGCLL1-209ENST00000515546 SPINK6Q6UWN8 80 aa9.15□□□□□ -0.94
HMGCLL1-209ENST00000515546 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
HMGCLL1-209ENST00000515546 KRTAP7-1Q8IUC3 87 aa9.15□□□□□ -0.94
HMGCLL1-209ENST00000515546 LINC00469Q8N7U9 141 aa9.15□□□□□ -0.94
HMGCLL1-209ENST00000515546 SMIM1B2RUZ4 78 aa9.14□□□□□ -0.95
HMGCLL1-209ENST00000515546 DPM2O94777 84 aa9.14□□□□□ -0.95
HMGCLL1-209ENST00000515546 CKS1BP61024 79 aa9.14□□□□□ -0.95
HMGCLL1-209ENST00000515546 GAGE2EQ4V326 116 aa9.14□□□□□ -0.95
HMGCLL1-209ENST00000515546 SERTAD4-AS1Q5TG53 156 aa9.14□□□□□ -0.95
HMGCLL1-209ENST00000515546 TOMM7Q9P0U1 55 aa9.14□□□□□ -0.95
HMGCLL1-209ENST00000515546 GAGE2DQ9UEU5 116 aa9.14□□□□□ -0.95
HMGCLL1-209ENST00000515546 PSORS1C2Q9UIG4 136 aa9.14□□□□□ -0.95
HMGCLL1-209ENST00000515546 IGKCP01834 107 aa9.13□□□□□ -0.95
HMGCLL1-209ENST00000515546 PLNP26678 52 aa9.13□□□□□ -0.95
HMGCLL1-209ENST00000515546 C6orf226Q5I0X4 101 aa9.13□□□□□ -0.95
HMGCLL1-209ENST00000515546 C9orf129Q5T035 196 aaKnown RBP9.13□□□□□ -0.95
HMGCLL1-209ENST00000515546 C20orf202A1L168 122 aa9.12□□□□□ -0.95
HMGCLL1-209ENST00000515546 FAM19A5Q7Z5A7 132 aaPredicted RBP9.12□□□□□ -0.95
HMGCLL1-209ENST00000515546 ATOH7Q8N100 152 aa9.12□□□□□ -0.95
HMGCLL1-209ENST00000515546 LINC01600Q96MT4 127 aa9.12□□□□□ -0.95
HMGCLL1-209ENST00000515546 LOC105371267A0A1B0GV96 52 aa9.11□□□□□ -0.95
HMGCLL1-209ENST00000515546 SPINK8P0C7L1 97 aa9.11□□□□□ -0.95
HMGCLL1-209ENST00000515546 CXCL5P42830 114 aa9.11□□□□□ -0.95
HMGCLL1-209ENST00000515546 TMEM170BQ5T4T1 132 aa9.11□□□□□ -0.95
HMGCLL1-209ENST00000515546 KRTAP11-1Q8IUC1 163 aa9.11□□□□□ -0.95
HMGCLL1-209ENST00000515546 TMEM223A0PJW6 202 aa9.1□□□□□ -0.95
HMGCLL1-209ENST00000515546 H3BRM9 83 aa9.09□□□□□ -0.95
HMGCLL1-209ENST00000515546 M0QXV9 152 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms