RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PRSS2P07478 247 aa8□□□□□ -1.13
CLCN3-210ENST00000515420 PMVKQ15126 192 aa8□□□□□ -1.13
CLCN3-210ENST00000515420 PACRGQ96M98 296 aaPredicted RBP8□□□□□ -1.13
CLCN3-210ENST00000515420 CST9LQ9H4G1 147 aa8□□□□□ -1.13
CLCN3-210ENST00000515420 A0A096LNJ9 63 aa7.99□□□□□ -1.13
CLCN3-210ENST00000515420 HBDP02042 147 aa7.99□□□□□ -1.13
CLCN3-210ENST00000515420 CXCL5P42830 114 aa7.99□□□□□ -1.13
CLCN3-210ENST00000515420 HNRNPA3P51991 378 aaKnown RBP7.99□□□□□ -1.13
CLCN3-210ENST00000515420 PRR3P79522 188 aaKnown RBP7.99□□□□□ -1.13
CLCN3-210ENST00000515420 URB1-AS1Q96HZ7 61 aa7.99□□□□□ -1.13
CLCN3-210ENST00000515420 CKS1BP61024 79 aa7.98□□□□□ -1.13
CLCN3-210ENST00000515420 C9orf116Q5BN46 136 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-210ENST00000515420 C6orf226Q5I0X4 101 aa7.98□□□□□ -1.13
CLCN3-210ENST00000515420 C2orf82Q6UX34 121 aa7.98□□□□□ -1.13
CLCN3-210ENST00000515420 Q6ZRP5 223 aa7.98□□□□□ -1.13
CLCN3-210ENST00000515420 LINC00469Q8N7U9 141 aa7.98□□□□□ -1.13
CLCN3-210ENST00000515420 PKHD1L1Q86WI1 4243 aa7.98□□□□□ -1.13
CLCN3-210ENST00000515420 A0A1W2PNN7 141 aa7.97□□□□□ -1.13
CLCN3-210ENST00000515420 SMIM1B2RUZ4 78 aa7.97□□□□□ -1.13
CLCN3-210ENST00000515420 NDUFC2-KCTD14E9PQ53 114 aa7.97□□□□□ -1.13
CLCN3-210ENST00000515420 PDZD11Q5EBL8 140 aa7.97□□□□□ -1.13
CLCN3-210ENST00000515420 TOMM7Q9P0U1 55 aa7.97□□□□□ -1.13
CLCN3-210ENST00000515420 ATP5LO75964 103 aa7.96□□□□□ -1.14
CLCN3-210ENST00000515420 CBLN2Q8IUK8 224 aa7.96□□□□□ -1.14
CLCN3-210ENST00000515420 CHCHD1Q96BP2 118 aaKnown RBP7.96□□□□□ -1.14
CLCN3-210ENST00000515420 HERC1Q15751 4861 aa7.96□□□□□ -1.14
CLCN3-210ENST00000515420 F8VRH5 84 aa7.95□□□□□ -1.14
CLCN3-210ENST00000515420 H3BRM9 83 aa7.95□□□□□ -1.14
CLCN3-210ENST00000515420 IGLC3P0DOY3 106 aa7.95□□□□□ -1.14
CLCN3-210ENST00000515420 ODF1Q14990 250 aa7.94□□□□□ -1.14
CLCN3-210ENST00000515420 XP32Q5T750 250 aa7.94□□□□□ -1.14
CLCN3-210ENST00000515420 SLC7A5P1Q8MH63 180 aa7.94□□□□□ -1.14
CLCN3-210ENST00000515420 PMCHL1Q16048 86 aa7.93□□□□□ -1.14
CLCN3-210ENST00000515420 GAGE2EQ4V326 116 aa7.93□□□□□ -1.14
CLCN3-210ENST00000515420 COX7B2Q8TF08 81 aa7.93□□□□□ -1.14
CLCN3-210ENST00000515420 GAGE2DQ9UEU5 116 aa7.93□□□□□ -1.14
CLCN3-210ENST00000515420 LRP1Q07954 4544 aaKnown RBP7.92□□□□□ -1.14
CLCN3-210ENST00000515420 IGLV5-39A0A0G2JS06 123 aa7.91□□□□□ -1.14
CLCN3-210ENST00000515420 SPINK8P0C7L1 97 aa7.91□□□□□ -1.14
CLCN3-210ENST00000515420 NDUFA6P56556 154 aa7.91□□□□□ -1.14
CLCN3-210ENST00000515420 C9orf129Q5T035 196 aaKnown RBP7.91□□□□□ -1.14
CLCN3-210ENST00000515420 SPINK6Q6UWN8 80 aa7.91□□□□□ -1.14
CLCN3-210ENST00000515420 FAM168BA1KXE4 195 aa7.9□□□□□ -1.14
CLCN3-210ENST00000515420 TRGC2P03986 189 aa7.9□□□□□ -1.14
CLCN3-210ENST00000515420 ZNF22P17026 224 aaPredicted RBP7.9□□□□□ -1.14
CLCN3-210ENST00000515420 PHF5AQ7RTV0 110 aaKnown RBP7.9□□□□□ -1.14
CLCN3-210ENST00000515420 FAT3Q8TDW7 4589 aa7.9□□□□□ -1.15
CLCN3-210ENST00000515420 TRAV12-1A0A0B4J245 112 aa7.89□□□□□ -1.15
CLCN3-210ENST00000515420 M0QXV9 152 aa7.89□□□□□ -1.15
CLCN3-210ENST00000515420 SRSF9Q13242 221 aaKnown RBP eCLIP7.89□□□□□ -1.15
CLCN3-210ENST00000515420 FAM19A5Q7Z5A7 132 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-210ENST00000515420 BAGE3Q86Y29 109 aa7.89□□□□□ -1.15
CLCN3-210ENST00000515420 KRTAP7-1Q8IUC3 87 aa7.89□□□□□ -1.15
CLCN3-210ENST00000515420 PSORS1C2Q9UIG4 136 aa7.89□□□□□ -1.15
CLCN3-210ENST00000515420 HSBP1O75506 76 aa7.88□□□□□ -1.15
CLCN3-210ENST00000515420 SFTA2Q6UW10 78 aa7.88□□□□□ -1.15
CLCN3-210ENST00000515420 IFI27L1Q96BM0 104 aa7.88□□□□□ -1.15
CLCN3-210ENST00000515420 C11orf86A6NJI1 115 aa7.87□□□□□ -1.15
CLCN3-210ENST00000515420 CHTOPQ9Y3Y2 248 aaKnown RBP7.87□□□□□ -1.15
CLCN3-210ENST00000515420 COLCA2A8K830 154 aa7.86□□□□□ -1.15
CLCN3-210ENST00000515420 REG3GQ6UW15 175 aa7.86□□□□□ -1.15
CLCN3-210ENST00000515420 KRTAP4-8Q9BYQ9 185 aa7.86□□□□□ -1.15
CLCN3-210ENST00000515420 TP73-AS1Q9UF72 201 aa7.86□□□□□ -1.15
CLCN3-210ENST00000515420 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
CLCN3-210ENST00000515420 C1orf137Q5JT78 98 aa7.85□□□□□ -1.15
CLCN3-210ENST00000515420 TMEM170BQ5T4T1 132 aa7.85□□□□□ -1.15
CLCN3-210ENST00000515420 SERTAD4-AS1Q5TG53 156 aa7.85□□□□□ -1.15
CLCN3-210ENST00000515420 LINC01600Q96MT4 127 aa7.85□□□□□ -1.15
CLCN3-210ENST00000515420 XAGE1AQ9HD64 81 aa7.85□□□□□ -1.15
CLCN3-210ENST00000515420 PLA2G2DQ9UNK4 145 aa7.85□□□□□ -1.15
CLCN3-210ENST00000515420 UBE2BP63146 152 aa7.84□□□□□ -1.15
CLCN3-210ENST00000515420 FAM19A2Q8N3H0 131 aa7.84□□□□□ -1.15
CLCN3-210ENST00000515420 SERF1AO75920 110 aa7.83□□□□□ -1.16
CLCN3-210ENST00000515420 IGLV7-43P04211 117 aa7.83□□□□□ -1.16
CLCN3-210ENST00000515420 LINC00310P59036 64 aa7.83□□□□□ -1.16
CLCN3-210ENST00000515420 COX17Q14061 63 aa7.83□□□□□ -1.16
CLCN3-210ENST00000515420 LBHQ53QV2 105 aaPredicted RBP7.83□□□□□ -1.16
CLCN3-210ENST00000515420 C22orf24Q9Y442 160 aa7.83□□□□□ -1.16
CLCN3-210ENST00000515420 LEPROTL1O95214 131 aa7.82□□□□□ -1.16
CLCN3-210ENST00000515420 KRTAP11-1Q8IUC1 163 aa7.82□□□□□ -1.16
CLCN3-210ENST00000515420 IGLV5-37A0A075B6J1 123 aa7.81□□□□□ -1.16
CLCN3-210ENST00000515420 TMEM223A0PJW6 202 aa7.81□□□□□ -1.16
CLCN3-210ENST00000515420 NUPR1O60356 82 aa7.81□□□□□ -1.16
CLCN3-210ENST00000515420 MRPL55Q7Z7F7 128 aaKnown RBP7.81□□□□□ -1.16
CLCN3-210ENST00000515420 DIRC1Q969H9 104 aa7.81□□□□□ -1.16
CLCN3-210ENST00000515420 ZNF625Q96I27 306 aaPredicted RBP7.81□□□□□ -1.16
CLCN3-210ENST00000515420 HSPB8Q9UJY1 196 aa7.8□□□□□ -1.16
CLCN3-210ENST00000515420 ERG28Q9UKR5 140 aa7.8□□□□□ -1.16
CLCN3-210ENST00000515420 PFN2P35080 140 aa7.79□□□□□ -1.16
CLCN3-210ENST00000515420 H0Y9J4 135 aa7.78□□□□□ -1.16
CLCN3-210ENST00000515420 PLNP26678 52 aa7.78□□□□□ -1.16
CLCN3-210ENST00000515420 NKAPP1Q8N9T2 125 aa7.77□□□□□ -1.17
CLCN3-210ENST00000515420 KRTAP10-8P60410 259 aa7.76□□□□□ -1.17
CLCN3-210ENST00000515420 HERV-K104P63124 156 aa7.76□□□□□ -1.17
CLCN3-210ENST00000515420 C4orf48Q5BLP8 95 aa7.76□□□□□ -1.17
CLCN3-210ENST00000515420 SND1-IT1Q9HBX3 110 aa7.76□□□□□ -1.17
CLCN3-210ENST00000515420 H0Y8G0 127 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 ZNF861PO60384 105 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 HIST1H2BKO60814 126 aa7.75□□□□□ -1.17
CLCN3-210ENST00000515420 SCO1O75880 301 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms