RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 NTN5Q8WTR8 489 aaPredicted RBP11.01□□□□□ -0.65
AP3S1-208ENST00000515066 C6orf226Q5I0X4 101 aa11□□□□□ -0.65
AP3S1-208ENST00000515066 ZNF561-AS1K7EIQ3 104 aa10.99□□□□□ -0.65
AP3S1-208ENST00000515066 NDUFA1O15239 70 aa10.99□□□□□ -0.65
AP3S1-208ENST00000515066 SLPIP03973 132 aa10.99□□□□□ -0.65
AP3S1-208ENST00000515066 ZNF815PA8K554 130 aa10.98□□□□□ -0.65
AP3S1-208ENST00000515066 C10orf25Q5T742 122 aa10.98□□□□□ -0.65
AP3S1-208ENST00000515066 BOD1L2Q8IYS8 172 aa10.98□□□□□ -0.65
AP3S1-208ENST00000515066 A0A087WTM6 91 aa10.98□□□□□ -0.65
AP3S1-208ENST00000515066 C2orf48Q96LS8 159 aa10.98□□□□□ -0.65
AP3S1-208ENST00000515066 MYMXA0A1B0GTQ4 84 aa10.97□□□□□ -0.65
AP3S1-208ENST00000515066 CXCL5P42830 114 aa10.97□□□□□ -0.65
AP3S1-208ENST00000515066 CKS1BP61024 79 aa10.97□□□□□ -0.65
AP3S1-208ENST00000515066 UNQ6190/PRO20217Q6UXQ8 127 aa10.97□□□□□ -0.65
AP3S1-208ENST00000515066 PRO1933Q9H354 126 aa10.97□□□□□ -0.65
AP3S1-208ENST00000515066 DNAH11Q96DT5 4516 aa10.96□□□□□ -0.65
AP3S1-208ENST00000515066 TNP2Q05952 138 aa10.96□□□□□ -0.65
AP3S1-208ENST00000515066 RYR3Q15413 4870 aa10.96□□□□□ -0.66
AP3S1-208ENST00000515066 DLEU1O43261 78 aa10.95□□□□□ -0.66
AP3S1-208ENST00000515066 Q6ZRU5 148 aa10.95□□□□□ -0.66
AP3S1-208ENST00000515066 C14orf177Q52M58 125 aa10.95□□□□□ -0.66
AP3S1-208ENST00000515066 SLC25A34Q6PIV7 304 aa10.95□□□□□ -0.66
AP3S1-208ENST00000515066 Q8N814 137 aa10.95□□□□□ -0.66
AP3S1-208ENST00000515066 CAMK2N2Q96S95 79 aa10.95□□□□□ -0.66
AP3S1-208ENST00000515066 A0A0J9YXY3 114 aa10.94□□□□□ -0.66
AP3S1-208ENST00000515066 SFTA2Q6UW10 78 aa10.94□□□□□ -0.66
AP3S1-208ENST00000515066 HERV-K104P63124 156 aa10.93□□□□□ -0.66
AP3S1-208ENST00000515066 C6orf48Q9UBA6 75 aa10.93□□□□□ -0.66
AP3S1-208ENST00000515066 PKD1P98161 4303 aa10.93□□□□□ -0.66
AP3S1-208ENST00000515066 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.92□□□□□ -0.66
AP3S1-208ENST00000515066 F8WDY8 70 aa10.92□□□□□ -0.66
AP3S1-208ENST00000515066 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
AP3S1-208ENST00000515066 SYCNQ0VAF6 134 aa10.92□□□□□ -0.66
AP3S1-208ENST00000515066 C9orf116Q5BN46 136 aaPredicted RBP10.92□□□□□ -0.66
AP3S1-208ENST00000515066 HECTD4Q9Y4D8 3996 aa10.92□□□□□ -0.66
AP3S1-208ENST00000515066 C2orf91Q6ZV80 131 aa10.92□□□□□ -0.66
AP3S1-208ENST00000515066 UQCR10Q9UDW1 63 aa10.92□□□□□ -0.66
AP3S1-208ENST00000515066 CARD19Q96LW7 228 aa10.91□□□□□ -0.66
AP3S1-208ENST00000515066 LITAFQ99732 161 aa10.91□□□□□ -0.66
AP3S1-208ENST00000515066 TRBV30A0A0K0K1B3 111 aa10.9□□□□□ -0.66
AP3S1-208ENST00000515066 SCGB1D4Q6XE38 83 aa10.9□□□□□ -0.66
AP3S1-208ENST00000515066 MIEN1Q9BRT3 115 aa10.9□□□□□ -0.66
AP3S1-208ENST00000515066 TSTD3H0UI37 97 aa10.89□□□□□ -0.67
AP3S1-208ENST00000515066 ERG28Q9UKR5 140 aa10.89□□□□□ -0.67
AP3S1-208ENST00000515066 DNAH5Q8TE73 4624 aa10.88□□□□□ -0.67
AP3S1-208ENST00000515066 ADAMTSL4-AS1Q5T5F5 129 aa10.88□□□□□ -0.67
AP3S1-208ENST00000515066 SMIM13P0DJ93 91 aa10.87□□□□□ -0.67
AP3S1-208ENST00000515066 MEIG1Q5JSS6 88 aa10.87□□□□□ -0.67
AP3S1-208ENST00000515066 A0A0U1RRA0 63 aa10.86□□□□□ -0.67
AP3S1-208ENST00000515066 PFN2P35080 140 aa10.86□□□□□ -0.67
AP3S1-208ENST00000515066 FUSP35637 526 aaKnown RBP eCLIP10.86□□□□□ -0.67
AP3S1-208ENST00000515066 RNF151Q2KHN1 245 aa10.86□□□□□ -0.67
AP3S1-208ENST00000515066 HIGD1BQ9P298 99 aa10.86□□□□□ -0.67
AP3S1-208ENST00000515066 TIMM17BO60830 172 aa10.85□□□□□ -0.67
AP3S1-208ENST00000515066 DAND5Q8N907 189 aa10.85□□□□□ -0.67
AP3S1-208ENST00000515066 PKHD1P08F94 4074 aa10.85□□□□□ -0.67
AP3S1-208ENST00000515066 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.85□□□□□ -0.67
AP3S1-208ENST00000515066 COX17Q14061 63 aa10.85□□□□□ -0.67
AP3S1-208ENST00000515066 KRTAP10-2P60368 255 aa10.84□□□□□ -0.67
AP3S1-208ENST00000515066 LINC00336Q6ZUF6 198 aa10.84□□□□□ -0.67
AP3S1-208ENST00000515066 C9orf163Q8N9P6 203 aa10.84□□□□□ -0.67
AP3S1-208ENST00000515066 TMEM238C9JI98 176 aa10.83□□□□□ -0.68
AP3S1-208ENST00000515066 NDUFC2-KCTD14E9PQ53 114 aa10.83□□□□□ -0.68
AP3S1-208ENST00000515066 EREGO14944 169 aa10.83□□□□□ -0.68
AP3S1-208ENST00000515066 LINC00158P58513 81 aa10.83□□□□□ -0.68
AP3S1-208ENST00000515066 MIR7-3HGQ8N6C7 128 aa10.83□□□□□ -0.68
AP3S1-208ENST00000515066 LINC00587B1AMM8 73 aa10.82□□□□□ -0.68
AP3S1-208ENST00000515066 TLX1NBP0CAT3 122 aa10.82□□□□□ -0.68
AP3S1-208ENST00000515066 CIRBPQ14011 172 aaKnown RBP10.82□□□□□ -0.68
AP3S1-208ENST00000515066 LINC01620Q4KN68 170 aa10.82□□□□□ -0.68
AP3S1-208ENST00000515066 Q6ZRP5 223 aa10.82□□□□□ -0.68
AP3S1-208ENST00000515066 SPANXB1Q9NS25 103 aaPredicted RBP10.82□□□□□ -0.68
AP3S1-208ENST00000515066 EIF4EBP3O60516 100 aaPredicted RBP10.82□□□□□ -0.68
AP3S1-208ENST00000515066 HNRNPA3P51991 378 aaKnown RBP10.82□□□□□ -0.68
AP3S1-208ENST00000515066 SPANXDQ9BXN6 97 aa10.82□□□□□ -0.68
AP3S1-208ENST00000515066 SPANXCQ9NY87 97 aa10.82□□□□□ -0.68
AP3S1-208ENST00000515066 DDTP30046 118 aa10.8□□□□□ -0.68
AP3S1-208ENST00000515066 KRTAP3-3Q9BYR6 98 aa10.8□□□□□ -0.68
AP3S1-208ENST00000515066 KRTAP3-2Q9BYR7 98 aa10.8□□□□□ -0.68
AP3S1-208ENST00000515066 SOSTDC1Q6X4U4 206 aa10.79□□□□□ -0.68
AP3S1-208ENST00000515066 IGLV5-52A0A0A0MRZ9 124 aa10.79□□□□□ -0.68
AP3S1-208ENST00000515066 A0A1B0GVY2 172 aa10.79□□□□□ -0.68
AP3S1-208ENST00000515066 SND1-IT1Q9HBX3 110 aa10.79□□□□□ -0.68
AP3S1-208ENST00000515066 NPC2P61916 151 aa10.78□□□□□ -0.68
AP3S1-208ENST00000515066 RPL18AQ02543 176 aaKnown RBP10.78□□□□□ -0.68
AP3S1-208ENST00000515066 SRSF9Q13242 221 aaKnown RBP eCLIP10.78□□□□□ -0.68
AP3S1-208ENST00000515066 SDIM1Q6ZPB5 146 aa10.78□□□□□ -0.68
AP3S1-208ENST00000515066 LOC107984640A0A0U1RRK4 108 aa10.77□□□□□ -0.69
AP3S1-208ENST00000515066 PTTG1IPP53801 180 aa10.77□□□□□ -0.69
AP3S1-208ENST00000515066 GAGE2EQ4V326 116 aa10.77□□□□□ -0.69
AP3S1-208ENST00000515066 Q6ZVH6 145 aa10.77□□□□□ -0.69
AP3S1-208ENST00000515066 LINC00308Q8TCZ7 52 aa10.77□□□□□ -0.69
AP3S1-208ENST00000515066 HIST1H4GQ99525 98 aa10.77□□□□□ -0.69
AP3S1-208ENST00000515066 XAGE1AQ9HD64 81 aa10.77□□□□□ -0.69
AP3S1-208ENST00000515066 GAGE2DQ9UEU5 116 aa10.77□□□□□ -0.69
AP3S1-208ENST00000515066 A0A096LNI7 61 aa10.76□□□□□ -0.69
AP3S1-208ENST00000515066 CTAG1AP78358 180 aa10.76□□□□□ -0.69
AP3S1-208ENST00000515066 LOC107984156A0A0G2JMH3 177 aa10.76□□□□□ -0.69
AP3S1-208ENST00000515066 C9orf129Q5T035 196 aaKnown RBP10.76□□□□□ -0.69
AP3S1-208ENST00000515066 ARL17AQ8IVW1 177 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms