RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 SDIM1Q6ZPB5 146 aa12.11□□□□□ -0.47
SNX2-213ENST00000514949 FN1P02751 2386 aaKnown RBP12.11□□□□□ -0.47
SNX2-213ENST00000514949 TRBV7-7A0A0K0K1E9 115 aa12.1□□□□□ -0.47
SNX2-213ENST00000514949 C9orf66Q5T8R8 295 aa12.1□□□□□ -0.47
SNX2-213ENST00000514949 SMR3AQ99954 134 aa12.1□□□□□ -0.47
SNX2-213ENST00000514949 LY6G6DO95868 133 aa12.09□□□□□ -0.47
SNX2-213ENST00000514949 TTC32Q5I0X7 151 aa12.09□□□□□ -0.47
SNX2-213ENST00000514949 PFN2P35080 140 aa12.08□□□□□ -0.47
SNX2-213ENST00000514949 XCL1P47992 114 aa12.08□□□□□ -0.47
SNX2-213ENST00000514949 PAX4O43316 350 aa12.08□□□□□ -0.48
SNX2-213ENST00000514949 INAFM2P0DMQ5 153 aa12.08□□□□□ -0.48
SNX2-213ENST00000514949 MALP21145 153 aa12.08□□□□□ -0.48
SNX2-213ENST00000514949 GCN1Q92616 2671 aaKnown RBP12.07□□□□□ -0.48
SNX2-213ENST00000514949 IMUPQ9GZP8 106 aa12.07□□□□□ -0.48
SNX2-213ENST00000514949 CD164L2Q6UWJ8 174 aa12.06□□□□□ -0.48
SNX2-213ENST00000514949 Q9HAA7 133 aa12.05□□□□□ -0.48
SNX2-213ENST00000514949 VWFP04275 2813 aa12.05□□□□□ -0.48
SNX2-213ENST00000514949 FASNP49327 2511 aaKnown RBP12.04□□□□□ -0.48
SNX2-213ENST00000514949 A0A087WYN8 130 aa12.04□□□□□ -0.48
SNX2-213ENST00000514949 APOC4P55056 127 aa12.04□□□□□ -0.48
SNX2-213ENST00000514949 COX17Q14061 63 aa12.04□□□□□ -0.48
SNX2-213ENST00000514949 KIAA0087Q14695 138 aa12.04□□□□□ -0.48
SNX2-213ENST00000514949 CXCL5P42830 114 aa12.04□□□□□ -0.48
SNX2-213ENST00000514949 NBEAL2Q6ZNJ1 2754 aa12.04□□□□□ -0.48
SNX2-213ENST00000514949 LINC00643Q86TS7 51 aa12.04□□□□□ -0.48
SNX2-213ENST00000514949 SPATA3Q8NHX4 192 aa12.04□□□□□ -0.48
SNX2-213ENST00000514949 OBSCN-AS1Q96MR7 158 aa12.04□□□□□ -0.48
SNX2-213ENST00000514949 IGHV4-28A0A0C4DH34 117 aa12.03□□□□□ -0.48
SNX2-213ENST00000514949 DNAL4O96015 105 aa12.03□□□□□ -0.48
SNX2-213ENST00000514949 NDUFC2O95298 119 aa12.02□□□□□ -0.49
SNX2-213ENST00000514949 LINC00269Q8N2A0 174 aa12.02□□□□□ -0.49
SNX2-213ENST00000514949 A0A096LPF7 62 aa12.01□□□□□ -0.49
SNX2-213ENST00000514949 DEFB135Q30KP9 77 aa12.01□□□□□ -0.49
SNX2-213ENST00000514949 SMCR5Q8TEV8 140 aa12.01□□□□□ -0.49
SNX2-213ENST00000514949 CLPSL2Q6UWE3 100 aa12□□□□□ -0.49
SNX2-213ENST00000514949 CHCHD10Q8WYQ3 142 aaPredicted RBP12□□□□□ -0.49
SNX2-213ENST00000514949 C11orf68Q9H3H3 251 aaKnown RBP11.99□□□□□ -0.49
SNX2-213ENST00000514949 MIFP14174 115 aa11.99□□□□□ -0.49
SNX2-213ENST00000514949 REG3AQ06141 175 aa11.99□□□□□ -0.49
SNX2-213ENST00000514949 Q8NAQ8 132 aa11.99□□□□□ -0.49
SNX2-213ENST00000514949 ATP5G1P05496 136 aa11.98□□□□□ -0.49
SNX2-213ENST00000514949 DAD1P61803 113 aa11.98□□□□□ -0.49
SNX2-213ENST00000514949 OR13C6PQ8NH95 151 aa11.98□□□□□ -0.49
SNX2-213ENST00000514949 A0A1B0GX51 115 aa11.98□□□□□ -0.49
SNX2-213ENST00000514949 LECT2O14960 151 aa11.97□□□□□ -0.49
SNX2-213ENST00000514949 NANOS2P60321 138 aaKnown RBP11.97□□□□□ -0.49
SNX2-213ENST00000514949 LINC00167Q96N53 147 aa11.97□□□□□ -0.49
SNX2-213ENST00000514949 CFAP161Q6P656 301 aa11.96□□□□□ -0.49
SNX2-213ENST00000514949 DEFB4AO15263 64 aa11.96□□□□□ -0.5
SNX2-213ENST00000514949 ANGP03950 147 aaKnown RBP11.96□□□□□ -0.5
SNX2-213ENST00000514949 MUC7Q8TAX7 377 aa11.96□□□□□ -0.5
SNX2-213ENST00000514949 KLK5Q9Y337 293 aaPredicted RBP11.95□□□□□ -0.5
SNX2-213ENST00000514949 WIPF1O43516 503 aa11.94□□□□□ -0.5
SNX2-213ENST00000514949 LELP1Q5T871 98 aa11.94□□□□□ -0.5
SNX2-213ENST00000514949 CELA1Q9UNI1 258 aa11.94□□□□□ -0.5
SNX2-213ENST00000514949 NSD1Q96L73 2696 aaPredicted RBP11.94□□□□□ -0.5
SNX2-213ENST00000514949 OTOGQ6ZRI0 2925 aa11.94□□□□□ -0.5
SNX2-213ENST00000514949 INAFM1C9JVW0 142 aa11.93□□□□□ -0.5
SNX2-213ENST00000514949 SPART-AS1P0CW21 52 aa11.93□□□□□ -0.5
SNX2-213ENST00000514949 C9orf129Q5T035 196 aaKnown RBP11.93□□□□□ -0.5
SNX2-213ENST00000514949 GAGE2AQ6NT46 116 aa11.93□□□□□ -0.5
SNX2-213ENST00000514949 Q8N3U1 123 aa11.93□□□□□ -0.5
SNX2-213ENST00000514949 WFDC9Q8NEX5 89 aa11.93□□□□□ -0.5
SNX2-213ENST00000514949 TMEM126AQ9H061 195 aa11.93□□□□□ -0.5
SNX2-213ENST00000514949 NOTCH2Q04721 2471 aa11.93□□□□□ -0.5
SNX2-213ENST00000514949 ORMDL1Q9P0S3 153 aa11.92□□□□□ -0.5
SNX2-213ENST00000514949 CCDC179H3BU77 68 aa11.92□□□□□ -0.5
SNX2-213ENST00000514949 PRR34Q9NV39 138 aa11.92□□□□□ -0.5
SNX2-213ENST00000514949 IGLV10-54A0A075B6I4 117 aa11.91□□□□□ -0.5
SNX2-213ENST00000514949 TENM1Q9UKZ4 2725 aa11.91□□□□□ -0.5
SNX2-213ENST00000514949 B5MCH6 92 aa11.9□□□□□ -0.5
SNX2-213ENST00000514949 A0A0J9YWU9 116 aa11.89□□□□□ -0.51
SNX2-213ENST00000514949 IGHV4-30-4P0DP06 118 aa11.89□□□□□ -0.51
SNX2-213ENST00000514949 PRR3P79522 188 aaKnown RBP11.89□□□□□ -0.51
SNX2-213ENST00000514949 Q8N814 137 aa11.89□□□□□ -0.51
SNX2-213ENST00000514949 C14orf132Q9NPU4 83 aa11.89□□□□□ -0.51
SNX2-213ENST00000514949 FAM236AA0A1B0GUQ0 79 aa11.87□□□□□ -0.51
SNX2-213ENST00000514949 FAM236BA0A1B0GV22 79 aa11.87□□□□□ -0.51
SNX2-213ENST00000514949 SLPIP03973 132 aa11.87□□□□□ -0.51
SNX2-213ENST00000514949 C9orf116Q5BN46 136 aaPredicted RBP11.87□□□□□ -0.51
SNX2-213ENST00000514949 NCR3O14931 201 aa11.86□□□□□ -0.51
SNX2-213ENST00000514949 HECTD1Q9ULT8 2610 aa11.86□□□□□ -0.51
SNX2-213ENST00000514949 GVQW2A0A096LPI5 108 aaPredicted RBP11.85□□□□□ -0.51
SNX2-213ENST00000514949 SPAG11BQ08648 103 aa11.85□□□□□ -0.51
SNX2-213ENST00000514949 Q8NDZ9 215 aa11.85□□□□□ -0.51
SNX2-213ENST00000514949 JMJD7-PLA2G4BH0Y9G9 81 aa11.84□□□□□ -0.51
SNX2-213ENST00000514949 TMEM256-PLSCR3K7ERE1 68 aa11.84□□□□□ -0.51
SNX2-213ENST00000514949 C10orf25Q5T742 122 aa11.84□□□□□ -0.51
SNX2-213ENST00000514949 UNQ6190/PRO20217Q6UXQ8 127 aa11.83□□□□□ -0.52
SNX2-213ENST00000514949 Q6JHZ5 121 aa11.83□□□□□ -0.52
SNX2-213ENST00000514949 ENHOQ6UWT2 76 aa11.83□□□□□ -0.52
SNX2-213ENST00000514949 LINC00846Q9NV44 126 aa11.83□□□□□ -0.52
SNX2-213ENST00000514949 TEP1Q99973 2627 aaKnown RBP11.82□□□□□ -0.52
SNX2-213ENST00000514949 CYSRT1A8MQ03 144 aa11.82□□□□□ -0.52
SNX2-213ENST00000514949 CCKP06307 115 aa11.82□□□□□ -0.52
SNX2-213ENST00000514949 HIST1H4AP62805 103 aaKnown RBP11.82□□□□□ -0.52
SNX2-213ENST00000514949 LYPD5Q6UWN5 251 aa11.81□□□□□ -0.52
SNX2-213ENST00000514949 C6orf223Q8N319 242 aa11.81□□□□□ -0.52
SNX2-213ENST00000514949 KLK12Q9UKR0 248 aa11.81□□□□□ -0.52
SNX2-213ENST00000514949 H3BNG1 76 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms