RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 FAM104AQ969W3 186 aa8.93□□□□□ -0.98
ITGA3-214ENST00000514834 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.93□□□□□ -0.98
ITGA3-214ENST00000514834 KRTAP10-4P60372 401 aaPredicted RBP8.92□□□□□ -0.98
ITGA3-214ENST00000514834 FOXI1Q12951 378 aa8.92□□□□□ -0.98
ITGA3-214ENST00000514834 ODF1Q14990 250 aa8.92□□□□□ -0.98
ITGA3-214ENST00000514834 SS18Q15532 418 aa8.92□□□□□ -0.98
ITGA3-214ENST00000514834 SDIM1Q6ZPB5 146 aa8.92□□□□□ -0.98
ITGA3-214ENST00000514834 Q6ZUT4 128 aa8.92□□□□□ -0.98
ITGA3-214ENST00000514834 C15orf56Q8N910 161 aa8.92□□□□□ -0.98
ITGA3-214ENST00000514834 DMBT1Q9UGM3 2413 aaPredicted RBP8.92□□□□□ -0.98
ITGA3-214ENST00000514834 IGLV4-3A0A075B6K6 122 aa8.91□□□□□ -0.98
ITGA3-214ENST00000514834 F8VRH5 84 aa8.91□□□□□ -0.98
ITGA3-214ENST00000514834 DLEU1O43261 78 aa8.91□□□□□ -0.98
ITGA3-214ENST00000514834 CST9LQ9H4G1 147 aa8.91□□□□□ -0.98
ITGA3-214ENST00000514834 CHTOPQ9Y3Y2 248 aaKnown RBP8.91□□□□□ -0.98
ITGA3-214ENST00000514834 XCL1P47992 114 aa8.9□□□□□ -0.98
ITGA3-214ENST00000514834 HERVK_113P61574 105 aa8.9□□□□□ -0.98
ITGA3-214ENST00000514834 RNASE13Q5GAN3 156 aaKnown RBP8.9□□□□□ -0.98
ITGA3-214ENST00000514834 CD164L2Q6UWJ8 174 aa8.9□□□□□ -0.98
ITGA3-214ENST00000514834 GEMIN7Q9H840 131 aaKnown RBP8.9□□□□□ -0.98
ITGA3-214ENST00000514834 H3BRM9 83 aa8.89□□□□□ -0.99
ITGA3-214ENST00000514834 HINT1P49773 126 aaPredicted RBP8.89□□□□□ -0.99
ITGA3-214ENST00000514834 CNBPP62633 177 aaKnown RBP8.89□□□□□ -0.99
ITGA3-214ENST00000514834 HERVK_113P63121 156 aa8.89□□□□□ -0.99
ITGA3-214ENST00000514834 HIGD2BQ4VC39 106 aa8.89□□□□□ -0.99
ITGA3-214ENST00000514834 CFAP161Q6P656 301 aa8.89□□□□□ -0.99
ITGA3-214ENST00000514834 AMELXQ99217 191 aa8.89□□□□□ -0.99
ITGA3-214ENST00000514834 OPRPNQ99935 248 aaPredicted RBP8.89□□□□□ -0.99
ITGA3-214ENST00000514834 PLA2G1BP04054 148 aaKnown RBP8.88□□□□□ -0.99
ITGA3-214ENST00000514834 ANKRD39Q53RE8 183 aa8.88□□□□□ -0.99
ITGA3-214ENST00000514834 TRAV13-1A0A0B4J241 112 aa8.87□□□□□ -0.99
ITGA3-214ENST00000514834 TINCRA0A1B0GVN0 87 aa8.87□□□□□ -0.99
ITGA3-214ENST00000514834 CHTF8P0CG12 524 aa8.87□□□□□ -0.99
ITGA3-214ENST00000514834 BOD1L2Q8IYS8 172 aa8.87□□□□□ -0.99
ITGA3-214ENST00000514834 GVQW2A0A096LPI5 108 aaPredicted RBP8.86□□□□□ -0.99
ITGA3-214ENST00000514834 NMUP48645 174 aa8.86□□□□□ -0.99
ITGA3-214ENST00000514834 STPG4Q8N801 248 aa8.86□□□□□ -0.99
ITGA3-214ENST00000514834 LINC00526Q96FQ7 95 aa8.86□□□□□ -0.99
ITGA3-214ENST00000514834 IGHV1-58A0A0C4DH39 117 aa8.85□□□□□ -0.99
ITGA3-214ENST00000514834 HSD52Q0P140 79 aa8.85□□□□□ -0.99
ITGA3-214ENST00000514834 MRPL35Q9NZE8 188 aaKnown RBP8.85□□□□□ -0.99
ITGA3-214ENST00000514834 IGHV3-64A0A075B6Q5 118 aa8.84□□□□□ -0.99
ITGA3-214ENST00000514834 COX7A2LO14548 114 aa8.84□□□□□ -0.99
ITGA3-214ENST00000514834 CIRBPQ14011 172 aaKnown RBP8.84□□□□□ -0.99
ITGA3-214ENST00000514834 ZC2HC1BQ5TFG8 222 aa8.84□□□□□ -0.99
ITGA3-214ENST00000514834 FAM19A3Q7Z5A8 133 aa8.84□□□□□ -0.99
ITGA3-214ENST00000514834 HIGD1BQ9P298 99 aa8.84□□□□□ -0.99
ITGA3-214ENST00000514834 LRP1Q07954 4544 aaKnown RBP8.83□□□□□ -1
ITGA3-214ENST00000514834 IGHV3OR16-9A0A0B4J2B5 98 aa8.83□□□□□ -1
ITGA3-214ENST00000514834 UBE2D1P51668 147 aa8.83□□□□□ -1
ITGA3-214ENST00000514834 BVES-AS1Q5T3Y7 98 aa8.83□□□□□ -1
ITGA3-214ENST00000514834 LINC00469Q8N7U9 141 aa8.83□□□□□ -1
ITGA3-214ENST00000514834 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.82□□□□□ -1
ITGA3-214ENST00000514834 A6NDN8 102 aa8.82□□□□□ -1
ITGA3-214ENST00000514834 C11orf86A6NJI1 115 aa8.82□□□□□ -1
ITGA3-214ENST00000514834 COX6A2Q02221 97 aa8.82□□□□□ -1
ITGA3-214ENST00000514834 TMEM170BQ5T4T1 132 aa8.82□□□□□ -1
ITGA3-214ENST00000514834 LINC00242Q5T6M2 205 aa8.82□□□□□ -1
ITGA3-214ENST00000514834 C2orf91Q6ZV80 131 aa8.82□□□□□ -1
ITGA3-214ENST00000514834 LINC01561Q8N1V8 128 aa8.82□□□□□ -1
ITGA3-214ENST00000514834 ORAOV1Q8WV07 137 aa8.82□□□□□ -1
ITGA3-214ENST00000514834 PKHD1L1Q86WI1 4243 aa8.81□□□□□ -1
ITGA3-214ENST00000514834 APOMO95445 188 aa8.81□□□□□ -1
ITGA3-214ENST00000514834 MALP21145 153 aa8.81□□□□□ -1
ITGA3-214ENST00000514834 SFTA2Q6UW10 78 aa8.81□□□□□ -1
ITGA3-214ENST00000514834 A0A087WYN8 130 aa8.8□□□□□ -1
ITGA3-214ENST00000514834 RPL37AP61513 92 aaKnown RBP8.8□□□□□ -1
ITGA3-214ENST00000514834 C5orf38Q86SI9 138 aa8.8□□□□□ -1
ITGA3-214ENST00000514834 SPACA4Q8TDM5 124 aa8.8□□□□□ -1
ITGA3-214ENST00000514834 A0A0J9YXV3 536 aa8.79□□□□□ -1
ITGA3-214ENST00000514834 ZNF561-AS1K7EIQ3 104 aa8.79□□□□□ -1
ITGA3-214ENST00000514834 TAL2Q16559 108 aa8.79□□□□□ -1
ITGA3-214ENST00000514834 PCP2Q8IVA1 136 aa8.79□□□□□ -1
ITGA3-214ENST00000514834 PLEKHB2Q96CS7 222 aa8.79□□□□□ -1
ITGA3-214ENST00000514834 DPH3Q96FX2 82 aa8.79□□□□□ -1
ITGA3-214ENST00000514834 A0A087WZ39 114 aa8.78□□□□□ -1
ITGA3-214ENST00000514834 UBR4Q5T4S7 5183 aa8.78□□□□□ -1
ITGA3-214ENST00000514834 FAT3Q8TDW7 4589 aa8.78□□□□□ -1
ITGA3-214ENST00000514834 IGLV4-69A0A075B6H9 119 aa8.77□□□□□ -1.01
ITGA3-214ENST00000514834 IGLV5-45A0A087WSX0 123 aa8.77□□□□□ -1.01
ITGA3-214ENST00000514834 A0A096LNI7 61 aa8.77□□□□□ -1.01
ITGA3-214ENST00000514834 IGKV2-24A0A0C4DH68 120 aa8.77□□□□□ -1.01
ITGA3-214ENST00000514834 E9PLD3 99 aa8.77□□□□□ -1.01
ITGA3-214ENST00000514834 C2orf48Q96LS8 159 aa8.77□□□□□ -1.01
ITGA3-214ENST00000514834 IGKV2D-26A0A0A0MRZ7 120 aa8.76□□□□□ -1.01
ITGA3-214ENST00000514834 KRTAP29-1A8MX34 341 aaPredicted RBP8.76□□□□□ -1.01
ITGA3-214ENST00000514834 PLAC8Q9NZF1 115 aa8.76□□□□□ -1.01
ITGA3-214ENST00000514834 TP73-AS1Q9UF72 201 aa8.76□□□□□ -1.01
ITGA3-214ENST00000514834 MYMXA0A1B0GTQ4 84 aa8.75□□□□□ -1.01
ITGA3-214ENST00000514834 F8WDY8 70 aa8.75□□□□□ -1.01
ITGA3-214ENST00000514834 J3QL48 77 aa8.75□□□□□ -1.01
ITGA3-214ENST00000514834 PRSS2P07478 247 aa8.75□□□□□ -1.01
ITGA3-214ENST00000514834 ZNF22P17026 224 aaPredicted RBP8.75□□□□□ -1.01
ITGA3-214ENST00000514834 LGALS3P17931 250 aaKnown RBP8.75□□□□□ -1.01
ITGA3-214ENST00000514834 SYCNQ0VAF6 134 aa8.75□□□□□ -1.01
ITGA3-214ENST00000514834 CARD19Q96LW7 228 aa8.75□□□□□ -1.01
ITGA3-214ENST00000514834 TMEM223A0PJW6 202 aa8.74□□□□□ -1.01
ITGA3-214ENST00000514834 LEPROTO15243 131 aa8.74□□□□□ -1.01
ITGA3-214ENST00000514834 SPAG11BQ08648 103 aa8.74□□□□□ -1.01
ITGA3-214ENST00000514834 TAX1BP3O14907 124 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms