RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 AMMECR1LQ6DCA0 310 aa6.3□□□□□ -1.4
NEDD9-215ENST00000514660 SPANXA1Q9NS26 97 aa6.3□□□□□ -1.4
NEDD9-215ENST00000514660 IGLV4-3A0A075B6K6 122 aa6.29□□□□□ -1.4
NEDD9-215ENST00000514660 A0A1W2PNN7 141 aa6.29□□□□□ -1.4
NEDD9-215ENST00000514660 LINC01549A6NIU2 74 aa6.29□□□□□ -1.4
NEDD9-215ENST00000514660 FABP4P15090 132 aa6.29□□□□□ -1.4
NEDD9-215ENST00000514660 ZNF25P17030 456 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-215ENST00000514660 PKIAP61925 76 aa6.29□□□□□ -1.4
NEDD9-215ENST00000514660 RNASE13Q5GAN3 156 aaKnown RBP6.29□□□□□ -1.4
NEDD9-215ENST00000514660 KRTAP11-1Q8IUC1 163 aa6.29□□□□□ -1.4
NEDD9-215ENST00000514660 OR5A1Q8NGJ0 315 aa6.29□□□□□ -1.4
NEDD9-215ENST00000514660 TMEM141Q96I45 108 aa6.29□□□□□ -1.4
NEDD9-215ENST00000514660 TIMM17AQ99595 171 aa6.29□□□□□ -1.4
NEDD9-215ENST00000514660 LEPROTL1O95214 131 aa6.28□□□□□ -1.4
NEDD9-215ENST00000514660 SMAGPQ0VAQ4 97 aa6.28□□□□□ -1.4
NEDD9-215ENST00000514660 Q6ZUT4 128 aa6.28□□□□□ -1.4
NEDD9-215ENST00000514660 IFI27L1Q96BM0 104 aa6.28□□□□□ -1.4
NEDD9-215ENST00000514660 TMEM101Q96IK0 257 aa6.28□□□□□ -1.4
NEDD9-215ENST00000514660 PACRGQ96M98 296 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-215ENST00000514660 AMELXQ99217 191 aa6.28□□□□□ -1.4
NEDD9-215ENST00000514660 HIST1H2BLQ99880 126 aa6.28□□□□□ -1.4
NEDD9-215ENST00000514660 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
NEDD9-215ENST00000514660 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.27□□□□□ -1.41
NEDD9-215ENST00000514660 ATP5LO75964 103 aa6.27□□□□□ -1.41
NEDD9-215ENST00000514660 NPSP0C0P6 89 aa6.27□□□□□ -1.41
NEDD9-215ENST00000514660 LINC00526Q96FQ7 95 aa6.27□□□□□ -1.41
NEDD9-215ENST00000514660 VCX2Q9H322 139 aa6.27□□□□□ -1.41
NEDD9-215ENST00000514660 CST9LQ9H4G1 147 aa6.27□□□□□ -1.41
NEDD9-215ENST00000514660 TRAV8-4A0A0B4J246 113 aa6.26□□□□□ -1.41
NEDD9-215ENST00000514660 GAGE12HA6NDE8 117 aa6.26□□□□□ -1.41
NEDD9-215ENST00000514660 ZNF561-AS1K7EIQ3 104 aa6.26□□□□□ -1.41
NEDD9-215ENST00000514660 HSPB8Q9UJY1 196 aa6.26□□□□□ -1.41
NEDD9-215ENST00000514660 GVQW2A0A096LPI5 108 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-215ENST00000514660 LINC00959A0A1B0GUT2 108 aa6.25□□□□□ -1.41
NEDD9-215ENST00000514660 TSPAN13O95857 204 aa6.25□□□□□ -1.41
NEDD9-215ENST00000514660 C3orf79P0CE67 100 aa6.25□□□□□ -1.41
NEDD9-215ENST00000514660 S100A2P29034 98 aa6.25□□□□□ -1.41
NEDD9-215ENST00000514660 PMVKQ15126 192 aa6.25□□□□□ -1.41
NEDD9-215ENST00000514660 C1orf137Q5JT78 98 aa6.25□□□□□ -1.41
NEDD9-215ENST00000514660 KRTAP4-1Q9BYQ7 146 aa6.25□□□□□ -1.41
NEDD9-215ENST00000514660 IGLV1-50A0A075B6I6 118 aa6.24□□□□□ -1.41
NEDD9-215ENST00000514660 IGKV3OR2-268A0A0C4DH90 116 aa6.24□□□□□ -1.41
NEDD9-215ENST00000514660 UBE2D1P51668 147 aa6.24□□□□□ -1.41
NEDD9-215ENST00000514660 PAPPA-AS1Q5QFB9 102 aa6.24□□□□□ -1.41
NEDD9-215ENST00000514660 Q6ZN92 141 aa6.24□□□□□ -1.41
NEDD9-215ENST00000514660 TEX43Q6ZNM6 134 aa6.24□□□□□ -1.41
NEDD9-215ENST00000514660 TRAV13-1A0A0B4J241 112 aa6.23□□□□□ -1.41
NEDD9-215ENST00000514660 TRAV12-1A0A0B4J245 112 aa6.23□□□□□ -1.41
NEDD9-215ENST00000514660 H0Y9J4 135 aa6.23□□□□□ -1.41
NEDD9-215ENST00000514660 SYS1-DBNDD2H3BUS1 97 aa6.23□□□□□ -1.41
NEDD9-215ENST00000514660 IGLV7-43P04211 117 aa6.23□□□□□ -1.41
NEDD9-215ENST00000514660 LINC00242Q5T6M2 205 aa6.23□□□□□ -1.41
NEDD9-215ENST00000514660 PHF5AQ7RTV0 110 aaKnown RBP6.23□□□□□ -1.41
NEDD9-215ENST00000514660 FAM19A3Q7Z5A8 133 aa6.23□□□□□ -1.41
NEDD9-215ENST00000514660 MAP1LC3CQ9BXW4 147 aa6.23□□□□□ -1.41
NEDD9-215ENST00000514660 H0Y8G0 127 aa6.22□□□□□ -1.41
NEDD9-215ENST00000514660 PTTG1IPP53801 180 aa6.22□□□□□ -1.41
NEDD9-215ENST00000514660 KRTDAPP60985 99 aa6.22□□□□□ -1.41
NEDD9-215ENST00000514660 OR10D4PQ8NGN7 298 aa6.22□□□□□ -1.41
NEDD9-215ENST00000514660 IGLV4-69A0A075B6H9 119 aa6.21□□□□□ -1.42
NEDD9-215ENST00000514660 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-215ENST00000514660 CCL25O15444 150 aa6.21□□□□□ -1.42
NEDD9-215ENST00000514660 SS18Q15532 418 aa6.21□□□□□ -1.42
NEDD9-215ENST00000514660 PET117Q6UWS5 81 aa6.21□□□□□ -1.42
NEDD9-215ENST00000514660 CHCHD10Q8WYQ3 142 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-215ENST00000514660 DIRC1Q969H9 104 aa6.21□□□□□ -1.42
NEDD9-215ENST00000514660 PMCHL2Q9BQD1 86 aa6.21□□□□□ -1.42
NEDD9-215ENST00000514660 C2orf88Q9BSF0 95 aa6.21□□□□□ -1.42
NEDD9-215ENST00000514660 MRPL35Q9NZE8 188 aaKnown RBP6.21□□□□□ -1.42
NEDD9-215ENST00000514660 LINC00474Q9P2X8 69 aa6.21□□□□□ -1.42
NEDD9-215ENST00000514660 CHTOPQ9Y3Y2 248 aaKnown RBP6.21□□□□□ -1.42
NEDD9-215ENST00000514660 IGHV3OR16-9A0A0B4J2B5 98 aa6.2□□□□□ -1.42
NEDD9-215ENST00000514660 TINCRA0A1B0GVN0 87 aa6.2□□□□□ -1.42
NEDD9-215ENST00000514660 IGLC3P0DOY3 106 aa6.2□□□□□ -1.42
NEDD9-215ENST00000514660 LINC01545Q5VT33 79 aa6.2□□□□□ -1.42
NEDD9-215ENST00000514660 LOC105371267A0A1B0GV96 52 aa6.19□□□□□ -1.42
NEDD9-215ENST00000514660 C11orf86A6NJI1 115 aa6.19□□□□□ -1.42
NEDD9-215ENST00000514660 F8VRH5 84 aa6.19□□□□□ -1.42
NEDD9-215ENST00000514660 XCL1P47992 114 aa6.19□□□□□ -1.42
NEDD9-215ENST00000514660 FOXI1Q12951 378 aa6.19□□□□□ -1.42
NEDD9-215ENST00000514660 GAGE2BQ13066 116 aa6.19□□□□□ -1.42
NEDD9-215ENST00000514660 C9orf116Q5BN46 136 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-215ENST00000514660 CFAP161Q6P656 301 aa6.19□□□□□ -1.42
NEDD9-215ENST00000514660 CD164L2Q6UWJ8 174 aa6.19□□□□□ -1.42
NEDD9-215ENST00000514660 RETNLBQ9BQ08 111 aa6.19□□□□□ -1.42
NEDD9-215ENST00000514660 IGLV5-45A0A087WSX0 123 aa6.18□□□□□ -1.42
NEDD9-215ENST00000514660 C5orf38Q86SI9 138 aa6.18□□□□□ -1.42
NEDD9-215ENST00000514660 CARD19Q96LW7 228 aa6.18□□□□□ -1.42
NEDD9-215ENST00000514660 CDKN2A-AS1Q9UH64 79 aa6.18□□□□□ -1.42
NEDD9-215ENST00000514660 DPM2O94777 84 aa6.17□□□□□ -1.42
NEDD9-215ENST00000514660 ZNF22P17026 224 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-215ENST00000514660 LINC01547P58512 204 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-215ENST00000514660 SEC11AP67812 179 aa6.17□□□□□ -1.42
NEDD9-215ENST00000514660 GEMIN7Q9H840 131 aaKnown RBP6.17□□□□□ -1.42
NEDD9-215ENST00000514660 A0A087WZ39 114 aa6.16□□□□□ -1.42
NEDD9-215ENST00000514660 IGKCP01834 107 aa6.16□□□□□ -1.42
NEDD9-215ENST00000514660 HERVK_113P63121 156 aa6.16□□□□□ -1.42
NEDD9-215ENST00000514660 JOSD1Q15040 202 aaPredicted RBP6.16□□□□□ -1.42
NEDD9-215ENST00000514660 COX7A2LO14548 114 aa6.15□□□□□ -1.42
NEDD9-215ENST00000514660 SCGB1D1O95968 90 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms