RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 LINC01600Q96MT4 127 aa-0.38□□□□□ -2.47
HMGCS1-207ENST00000514610 PCLOQ9Y6V0 5065 aa-0.38□□□□□ -2.47
HMGCS1-207ENST00000514610 C1orf167Q5SNV9 1468 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 LOC730098B7Z3J9 87 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 TRAPPC2P0DI81 140 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 TRAPPC2BP0DI82 140 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 S100A1P23297 94 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 KRTDAPP60985 99 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 MRPS10P82664 201 aaKnown RBP-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 FDCSPQ8NFU4 85 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 C12orf57Q99622 126 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 C2orf88Q9BSF0 95 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 FXYD6Q9H0Q3 95 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 A0A0G2JMZ2 1700 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 XRN1Q8IZH2 1706 aaKnown RBP-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 KIAA0556O60303 1618 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 ACANP16112 2415 aa-0.39□□□□□ -2.47
HMGCS1-207ENST00000514610 MAP1AP78559 2803 aaPredicted RBP-0.4□□□□□ -2.47
HMGCS1-207ENST00000514610 ANKRD36A6QL64 1941 aa-0.4□□□□□ -2.47
HMGCS1-207ENST00000514610 CCDC141Q6ZP82 1450 aa-0.4□□□□□ -2.47
HMGCS1-207ENST00000514610 KMT2CQ8NEZ4 4911 aaKnown RBP-0.4□□□□□ -2.47
HMGCS1-207ENST00000514610 FAM223BA6NKX1 122 aa-0.4□□□□□ -2.47
HMGCS1-207ENST00000514610 M0R2T5 61 aa-0.4□□□□□ -2.47
HMGCS1-207ENST00000514610 SARNPP82979 210 aaKnown RBP-0.4□□□□□ -2.47
HMGCS1-207ENST00000514610 DEFB105AQ8NG35 78 aa-0.4□□□□□ -2.47
HMGCS1-207ENST00000514610 ARHGAP5Q13017 1502 aa-0.4□□□□□ -2.47
HMGCS1-207ENST00000514610 FLNBO75369 2602 aaKnown RBP-0.4□□□□□ -2.47
HMGCS1-207ENST00000514610 PZPP20742 1482 aa-0.41□□□□□ -2.47
HMGCS1-207ENST00000514610 IQSEC2Q5JU85 1478 aa-0.41□□□□□ -2.47
HMGCS1-207ENST00000514610 TMEM262E9PQX1 116 aa-0.41□□□□□ -2.48
HMGCS1-207ENST00000514610 SYS1-DBNDD2H3BUS1 97 aa-0.41□□□□□ -2.48
HMGCS1-207ENST00000514610 CGREF1Q99674 301 aa-0.41□□□□□ -2.48
HMGCS1-207ENST00000514610 FMN2Q9NZ56 1722 aa-0.41□□□□□ -2.48
HMGCS1-207ENST00000514610 FAM135AQ9P2D6 1515 aa-0.42□□□□□ -2.48
HMGCS1-207ENST00000514610 RYR3Q15413 4870 aa-0.42□□□□□ -2.48
HMGCS1-207ENST00000514610 KRTAP19-7Q3SYF9 63 aa-0.42□□□□□ -2.48
HMGCS1-207ENST00000514610 FLGP20930 4061 aaPredicted RBP-0.43□□□□□ -2.48
HMGCS1-207ENST00000514610 LCN9Q8WX39 176 aa-0.43□□□□□ -2.48
HMGCS1-207ENST00000514610 GNG8Q9UK08 70 aa-0.43□□□□□ -2.48
HMGCS1-207ENST00000514610 PLEKHH2Q8IVE3 1493 aa-0.43□□□□□ -2.48
HMGCS1-207ENST00000514610 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.43□□□□□ -2.48
HMGCS1-207ENST00000514610 PAPPA2Q9BXP8 1791 aa-0.44□□□□□ -2.48
HMGCS1-207ENST00000514610 EDC4Q6P2E9 1401 aaKnown RBP-0.44□□□□□ -2.48
HMGCS1-207ENST00000514610 CRYM-AS1A6NIL9 109 aa-0.44□□□□□ -2.48
HMGCS1-207ENST00000514610 NDUFC1O43677 76 aa-0.44□□□□□ -2.48
HMGCS1-207ENST00000514610 SPRR2AP35326 72 aa-0.44□□□□□ -2.48
HMGCS1-207ENST00000514610 SEC11AP67812 179 aa-0.44□□□□□ -2.48
HMGCS1-207ENST00000514610 PKD1P98161 4303 aa-0.44□□□□□ -2.48
HMGCS1-207ENST00000514610 NLRP1Q9C000 1473 aa-0.45□□□□□ -2.48
HMGCS1-207ENST00000514610 LINC00587B1AMM8 73 aa-0.45□□□□□ -2.48
HMGCS1-207ENST00000514610 SNCAP37840 140 aa-0.45□□□□□ -2.48
HMGCS1-207ENST00000514610 GTF2H5Q6ZYL4 71 aa-0.45□□□□□ -2.48
HMGCS1-207ENST00000514610 VAMP8Q9BV40 100 aa-0.45□□□□□ -2.48
HMGCS1-207ENST00000514610 DOPEY1Q5JWR5 2465 aa-0.45□□□□□ -2.48
HMGCS1-207ENST00000514610 NKTRP30414 1462 aaKnown RBP-0.46□□□□□ -2.48
HMGCS1-207ENST00000514610 A0A1B0GU69 56 aa-0.46□□□□□ -2.48
HMGCS1-207ENST00000514610 CPSF4LA6NMK7 179 aaKnown RBP-0.46□□□□□ -2.48
HMGCS1-207ENST00000514610 H3BQF6 201 aa-0.46□□□□□ -2.48
HMGCS1-207ENST00000514610 MPC2O95563 127 aa-0.46□□□□□ -2.48
HMGCS1-207ENST00000514610 HSD52Q0P140 79 aa-0.46□□□□□ -2.48
HMGCS1-207ENST00000514610 KLK9Q2XQG4 91 aa-0.46□□□□□ -2.48
HMGCS1-207ENST00000514610 CRIPTQ9P021 101 aa-0.46□□□□□ -2.48
HMGCS1-207ENST00000514610 ABCC5O15440 1437 aa-0.47□□□□□ -2.48
HMGCS1-207ENST00000514610 HERC1Q15751 4861 aa-0.47□□□□□ -2.48
HMGCS1-207ENST00000514610 MARF1Q9Y4F3 1742 aaKnown RBP-0.47□□□□□ -2.48
HMGCS1-207ENST00000514610 TRBV25-1A0A075B6N4 114 aa-0.47□□□□□ -2.48
HMGCS1-207ENST00000514610 A0A0G2JND7 137 aa-0.47□□□□□ -2.48
HMGCS1-207ENST00000514610 hADV29S1A0JD25 119 aa-0.47□□□□□ -2.48
HMGCS1-207ENST00000514610 C7orf77A4D0Y5 90 aa-0.47□□□□□ -2.48
HMGCS1-207ENST00000514610 C6orf201Q7Z4U5 140 aa-0.47□□□□□ -2.48
HMGCS1-207ENST00000514610 STAB2Q8WWQ8 2551 aa-0.47□□□□□ -2.48
HMGCS1-207ENST00000514610 COL4A6Q14031 1691 aa-0.47□□□□□ -2.48
HMGCS1-207ENST00000514610 PRDM15P57071 1507 aaPredicted RBP-0.48□□□□□ -2.49
HMGCS1-207ENST00000514610 NBEAL1Q6ZS30 2694 aa-0.48□□□□□ -2.49
HMGCS1-207ENST00000514610 FAT1Q14517 4588 aa-0.48□□□□□ -2.49
HMGCS1-207ENST00000514610 A0A087WVE0 104 aa-0.48□□□□□ -2.49
HMGCS1-207ENST00000514610 H0Y9P7 68 aa-0.48□□□□□ -2.49
HMGCS1-207ENST00000514610 I3L3M4 83 aa-0.48□□□□□ -2.49
HMGCS1-207ENST00000514610 PMCHL1Q16048 86 aa-0.48□□□□□ -2.49
HMGCS1-207ENST00000514610 CACFD1Q9UGQ2 172 aa-0.48□□□□□ -2.49
HMGCS1-207ENST00000514610 APLNQ9ULZ1 77 aa-0.48□□□□□ -2.49
HMGCS1-207ENST00000514610 C20orf202A1L168 122 aa-0.49□□□□□ -2.49
HMGCS1-207ENST00000514610 CCL22O00626 93 aa-0.49□□□□□ -2.49
HMGCS1-207ENST00000514610 DEFB135Q30KP9 77 aa-0.49□□□□□ -2.49
HMGCS1-207ENST00000514610 ZFYVE16Q7Z3T8 1539 aa-0.49□□□□□ -2.49
HMGCS1-207ENST00000514610 ABCC2Q92887 1545 aa-0.49□□□□□ -2.49
HMGCS1-207ENST00000514610 CNOT1A5YKK6 2376 aaKnown RBP-0.49□□□□□ -2.49
HMGCS1-207ENST00000514610 LRRC37AA6NMS7 1700 aa-0.5□□□□□ -2.49
HMGCS1-207ENST00000514610 KNDC1Q76NI1 1749 aa-0.5□□□□□ -2.49
HMGCS1-207ENST00000514610 PCNX1Q96RV3 2341 aa-0.5□□□□□ -2.49
HMGCS1-207ENST00000514610 H7BZZ5 65 aa-0.5□□□□□ -2.49
HMGCS1-207ENST00000514610 ARMS2P0C7Q2 107 aa-0.5□□□□□ -2.49
HMGCS1-207ENST00000514610 PSMG4Q5JS54 123 aa-0.5□□□□□ -2.49
HMGCS1-207ENST00000514610 C9orf62Q8N4C0 152 aa-0.5□□□□□ -2.49
HMGCS1-207ENST00000514610 NCOA3Q9Y6Q9 1424 aa-0.5□□□□□ -2.49
HMGCS1-207ENST00000514610 MLH3Q9UHC1 1453 aa-0.5□□□□□ -2.49
HMGCS1-207ENST00000514610 TRAV30A0A087WSZ9 112 aa-0.51□□□□□ -2.49
HMGCS1-207ENST00000514610 SLIT1O75093 1534 aa-0.51□□□□□ -2.49
HMGCS1-207ENST00000514610 HMGN3Q15651 99 aa-0.51□□□□□ -2.49
HMGCS1-207ENST00000514610 H1FX-AS1Q4G0G2 97 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms