RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 MRPL32Q9BYC8 188 aaKnown RBP2.06□□□□□ -2.08
RFC1-216ENST00000514572 CST9LQ9H4G1 147 aa2.06□□□□□ -2.08
RFC1-216ENST00000514572 LRP1Q07954 4544 aaKnown RBP2.06□□□□□ -2.08
RFC1-216ENST00000514572 A0A087WTM6 91 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 A0A0J9YY99 117 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 TRDV1A0A1B0GX56 115 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 A8MTW9 85 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 M0R2Z0 102 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 CFDP00746 253 aaPredicted RBP2.05□□□□□ -2.08
RFC1-216ENST00000514572 HTN1P15515 57 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 EVI2AP22794 236 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 AKR1C3P42330 323 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 ESRGQ1W209 222 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 SPINK9Q5DT21 86 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 GDF5OSQ5U4N7 250 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 FP248Q71RG6 208 aaPredicted RBP2.05□□□□□ -2.08
RFC1-216ENST00000514572 TMEM263Q8WUH6 116 aaKnown RBP2.05□□□□□ -2.08
RFC1-216ENST00000514572 ZNF625Q96I27 306 aaPredicted RBP2.05□□□□□ -2.08
RFC1-216ENST00000514572 PRADC1Q9BSG0 188 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 NOP10Q9NPE3 64 aaKnown RBP2.05□□□□□ -2.08
RFC1-216ENST00000514572 LY96Q9Y6Y9 160 aa2.05□□□□□ -2.08
RFC1-216ENST00000514572 TRGV2A0A075B6R0 118 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 TRAV5A0A0B4J249 113 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 A0A1B0GV72 72 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 SNRPGP15A8MWD9 76 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 F8W036 122 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 GABARAPH6UMI1 98 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 H7BYZ3 331 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 TMEM256-PLSCR3K7ERE1 68 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 BAALC-AS2P0C853 105 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 DEFB1P60022 68 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 SPINK13Q1W4C9 94 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 TDRG1Q3Y452 100 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 SPANXN5Q5MJ07 72 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.04□□□□□ -2.08
RFC1-216ENST00000514572 S100A16Q96FQ6 103 aaKnown RBP2.04□□□□□ -2.08
RFC1-216ENST00000514572 CARD19Q96LW7 228 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 SLC50A1Q9BRV3 221 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 MRPL36Q9P0J6 103 aaKnown RBP2.04□□□□□ -2.08
RFC1-216ENST00000514572 U3KQ87 197 aa2.04□□□□□ -2.08
RFC1-216ENST00000514572 TRAV12-2A0A075B6T6 113 aa2.03□□□□□ -2.08
RFC1-216ENST00000514572 PIGBOS1A0A0B4J2F0 54 aa2.03□□□□□ -2.08
RFC1-216ENST00000514572 C3orf85A0A1B0GTC6 90 aa2.03□□□□□ -2.08
RFC1-216ENST00000514572 MAP1LC3B2A6NCE7 125 aa2.03□□□□□ -2.08
RFC1-216ENST00000514572 CEBPZOSA8MTT3 80 aa2.03□□□□□ -2.08
RFC1-216ENST00000514572 UBE2BP63146 152 aa2.03□□□□□ -2.08
RFC1-216ENST00000514572 MAP1LC3BQ9GZQ8 125 aa2.03□□□□□ -2.08
RFC1-216ENST00000514572 COPZ2Q9P299 210 aa2.03□□□□□ -2.08
RFC1-216ENST00000514572 FAT3Q8TDW7 4589 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 A0A096LPF7 62 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 TRAV1-1A0A0B4J248 108 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 SMIM31A0A1B0GVY4 71 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 TRGC2P03986 189 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 GPX1P07203 203 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 RPL7P18124 248 aaKnown RBP2.02□□□□□ -2.09
RFC1-216ENST00000514572 SDC2P34741 201 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 HAMPP81172 84 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 HIST1H1AQ02539 215 aaPredicted RBP2.02□□□□□ -2.09
RFC1-216ENST00000514572 NMSQ5H8A3 153 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 SOSTDC1Q6X4U4 206 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 SMIM15Q7Z3B0 74 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 Q8N814 137 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 TRGV9Q99603 122 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 LINC00467Q9BRT7 94 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 FXYD6Q9H0Q3 95 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 PRO0255Q9UI72 69 aa2.02□□□□□ -2.09
RFC1-216ENST00000514572 TRGV1A0A0A0MS02 117 aa2.01□□□□□ -2.09
RFC1-216ENST00000514572 A0A1W2PRE2 83 aa2.01□□□□□ -2.09
RFC1-216ENST00000514572 CRYM-AS1A6NIL9 109 aa2.01□□□□□ -2.09
RFC1-216ENST00000514572 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
RFC1-216ENST00000514572 PDE6HQ13956 83 aa2.01□□□□□ -2.09
RFC1-216ENST00000514572 RNASE10Q5GAN6 216 aaKnown RBP2.01□□□□□ -2.09
RFC1-216ENST00000514572 LYPD5Q6UWN5 251 aa2.01□□□□□ -2.09
RFC1-216ENST00000514572 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.01□□□□□ -2.09
RFC1-216ENST00000514572 Q6ZSA8 131 aa2.01□□□□□ -2.09
RFC1-216ENST00000514572 OR5H6Q8NGV6 325 aa2.01□□□□□ -2.09
RFC1-216ENST00000514572 TP53RKQ96S44 253 aa2.01□□□□□ -2.09
RFC1-216ENST00000514572 CRPP02741 224 aa2□□□□□ -2.09
RFC1-216ENST00000514572 SMCO1Q147U7 214 aa2□□□□□ -2.09
RFC1-216ENST00000514572 PATE2Q6UY27 113 aa2□□□□□ -2.09
RFC1-216ENST00000514572 CIB3Q96Q77 187 aaPredicted RBP2□□□□□ -2.09
RFC1-216ENST00000514572 HIGD1AQ9Y241 93 aa2□□□□□ -2.09
RFC1-216ENST00000514572 TRAV12-3A0A0B4J271 114 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 TRBV6-5A0A0K0K1A5 114 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 A8MWV9 139 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 HYPMO75409 117 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 IL5P05113 134 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 SLC25A5P05141 298 aaKnown RBP1.99□□□□□ -2.09
RFC1-216ENST00000514572 NBEAP1P0C6P0 100 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 MGST1P10620 155 aaKnown RBP1.99□□□□□ -2.09
RFC1-216ENST00000514572 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 SURF2Q15527 256 aaPredicted RBP1.99□□□□□ -2.09
RFC1-216ENST00000514572 LINC01556Q5JQF7 62 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 PHF5AQ7RTV0 110 aaKnown RBP1.99□□□□□ -2.09
RFC1-216ENST00000514572 WFDC10BQ8IUB3 73 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 SNX29P2Q8IUI4 249 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 ODF3Q96PU9 254 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 DPH3P1Q9H4G8 78 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 NAA60Q9H7X0 242 aa1.99□□□□□ -2.09
RFC1-216ENST00000514572 PAIP2BQ9ULR5 123 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms