RNA–Protein interactions for RNA: ENST00000514316.1

SEMA6A-213, Transcript of semaphorin 6A, humanhuman

TSL 4

Gene SEMA6A, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-213ENST00000514316 MRPL52Q86TS9 123 aaKnown RBP3.37□□□□□ -1.87
SEMA6A-213ENST00000514316 ZNF664Q8N3J9 261 aa3.37□□□□□ -1.87
SEMA6A-213ENST00000514316 PSMG3Q9BT73 122 aaPredicted RBP3.37□□□□□ -1.87
SEMA6A-213ENST00000514316 CCDC32Q9BV29 185 aa3.37□□□□□ -1.87
SEMA6A-213ENST00000514316 LINC00474Q9P2X8 69 aa3.37□□□□□ -1.87
SEMA6A-213ENST00000514316 PSORS1C2Q9UIG4 136 aa3.37□□□□□ -1.87
SEMA6A-213ENST00000514316 MUC2Q02817 5179 aa3.37□□□□□ -1.87
SEMA6A-213ENST00000514316 GVQW2A0A096LPI5 108 aaPredicted RBP3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 TMEM223A0PJW6 202 aa3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 MAP1LC3B2A6NCE7 125 aa3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 PPP1R2P9O14990 202 aa3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 BCL2P10415 239 aa3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 S100A1P23297 94 aa3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 SERF2P84101 59 aa3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 RPL18AQ02543 176 aaKnown RBP3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 AKR1C8PQ5T2L2 129 aa3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 RPL7L1Q6DKI1 246 aaKnown RBP3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 RASL11AQ6T310 242 aa3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 PHF5AQ7RTV0 110 aaKnown RBP3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 MAP1LC3BQ9GZQ8 125 aa3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 TNFSF18Q9UNG2 199 aa3.36□□□□□ -1.87
SEMA6A-213ENST00000514316 BORCS7-ASMTA0A0B4J1R7 106 aa3.35□□□□□ -1.87
SEMA6A-213ENST00000514316 A0A1W2PNN7 141 aa3.35□□□□□ -1.87
SEMA6A-213ENST00000514316 CCL25O15444 150 aa3.35□□□□□ -1.87
SEMA6A-213ENST00000514316 UBE2D1P51668 147 aa3.35□□□□□ -1.87
SEMA6A-213ENST00000514316 EIF5AP63241 154 aaKnown RBP3.35□□□□□ -1.87
SEMA6A-213ENST00000514316 TAL2Q16559 108 aa3.35□□□□□ -1.87
SEMA6A-213ENST00000514316 BAGE2Q86Y30 109 aa3.35□□□□□ -1.87
SEMA6A-213ENST00000514316 FER1L6-AS1Q8NA97 138 aa3.35□□□□□ -1.87
SEMA6A-213ENST00000514316 NKX6-2Q9C056 277 aaPredicted RBP3.35□□□□□ -1.87
SEMA6A-213ENST00000514316 PKIGQ9Y2B9 76 aa3.35□□□□□ -1.87
SEMA6A-213ENST00000514316 FXYD6-FXYD2A0A087WZ82 144 aa3.34□□□□□ -1.87
SEMA6A-213ENST00000514316 IGHV1-58A0A0C4DH39 117 aa3.34□□□□□ -1.87
SEMA6A-213ENST00000514316 LOC107984640A0A0U1RRK4 108 aa3.34□□□□□ -1.87
SEMA6A-213ENST00000514316 PFDN1O60925 122 aa3.34□□□□□ -1.87
SEMA6A-213ENST00000514316 APCSP02743 223 aa3.34□□□□□ -1.87
SEMA6A-213ENST00000514316 OR5AL1P0C617 328 aa3.34□□□□□ -1.87
SEMA6A-213ENST00000514316 FGF6P10767 208 aa3.34□□□□□ -1.87
SEMA6A-213ENST00000514316 C9orf116Q5BN46 136 aaPredicted RBP3.34□□□□□ -1.87
SEMA6A-213ENST00000514316 DIRC1Q969H9 104 aa3.34□□□□□ -1.87
SEMA6A-213ENST00000514316 NIT2Q9NQR4 276 aa3.34□□□□□ -1.87
SEMA6A-213ENST00000514316 K7EN84 100 aa3.33□□□□□ -1.88
SEMA6A-213ENST00000514316 UPK1BO75841 260 aa3.33□□□□□ -1.88
SEMA6A-213ENST00000514316 IGLV7-43P04211 117 aa3.33□□□□□ -1.88
SEMA6A-213ENST00000514316 CXCL1P09341 107 aa3.33□□□□□ -1.88
SEMA6A-213ENST00000514316 Q5BKY6 102 aa3.33□□□□□ -1.88
SEMA6A-213ENST00000514316 OR5A1Q8NGJ0 315 aa3.33□□□□□ -1.88
SEMA6A-213ENST00000514316 RPL39LQ96EH5 51 aaKnown RBP3.33□□□□□ -1.88
SEMA6A-213ENST00000514316 BTF3L4Q96K17 158 aa3.33□□□□□ -1.88
SEMA6A-213ENST00000514316 CAMK2N2Q96S95 79 aa3.33□□□□□ -1.88
SEMA6A-213ENST00000514316 TRAV1-1A0A0B4J248 108 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 LINC00959A0A1B0GUT2 108 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 A0A1B0GV72 72 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 TRGC1P0CF51 173 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 NTF3P20783 257 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 IFITM3Q01628 133 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 SS18Q15532 418 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 KRTAP13-2Q52LG2 175 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 LYZL1Q6UWQ5 148 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 FAM19A5Q7Z5A7 132 aaPredicted RBP3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 FAM213BQ8TBF2 198 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 SFT2D1Q8WV19 159 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 S100ZQ8WXG8 99 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 MARVELD1Q9BSK0 173 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 ALG5Q9Y673 324 aa3.32□□□□□ -1.88
SEMA6A-213ENST00000514316 APOMO95445 188 aa3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 IFNA1P01562 189 aa3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 IGLC6P0CF74 106 aa3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 RPL35P42766 123 aaKnown RBP3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 RPS20P60866 119 aaKnown RBP3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 UBE2BP63146 152 aa3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 NDUFA5Q16718 116 aa3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 CENPWQ5EE01 88 aa3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 RNASE13Q5GAN3 156 aaKnown RBP3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 KCNRGQ8N5I3 272 aa3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 GATD1Q8NB37 220 aa3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 TCEAL7Q9BRU2 100 aa3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 MED28Q9H204 178 aa3.31□□□□□ -1.88
SEMA6A-213ENST00000514316 SDHAF1A6NFY7 115 aa3.3□□□□□ -1.88
SEMA6A-213ENST00000514316 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.3□□□□□ -1.88
SEMA6A-213ENST00000514316 COX7A2LO14548 114 aa3.3□□□□□ -1.88
SEMA6A-213ENST00000514316 FOXA3P55318 350 aaPredicted RBP3.3□□□□□ -1.88
SEMA6A-213ENST00000514316 MEF2BQ02080 365 aaPredicted RBP3.3□□□□□ -1.88
SEMA6A-213ENST00000514316 EIF5AL1Q6IS14 154 aaKnown RBP3.3□□□□□ -1.88
SEMA6A-213ENST00000514316 C5orf38Q86SI9 138 aa3.3□□□□□ -1.88
SEMA6A-213ENST00000514316 NUP35Q8NFH5 326 aa3.3□□□□□ -1.88
SEMA6A-213ENST00000514316 RETNLBQ9BQ08 111 aa3.3□□□□□ -1.88
SEMA6A-213ENST00000514316 TMEM242Q9NWH2 141 aa3.3□□□□□ -1.88
SEMA6A-213ENST00000514316 TRAV13-1A0A0B4J241 112 aa3.29□□□□□ -1.88
SEMA6A-213ENST00000514316 GNG4P50150 75 aa3.29□□□□□ -1.88
SEMA6A-213ENST00000514316 SPAG11BQ08648 103 aa3.29□□□□□ -1.88
SEMA6A-213ENST00000514316 MRAP2Q96G30 205 aa3.29□□□□□ -1.88
SEMA6A-213ENST00000514316 GNG13Q9P2W3 67 aa3.29□□□□□ -1.88
SEMA6A-213ENST00000514316 F2Z2F3 143 aa3.28□□□□□ -1.88
SEMA6A-213ENST00000514316 I3L3M4 83 aa3.28□□□□□ -1.88
SEMA6A-213ENST00000514316 ARPC5O15511 151 aa3.28□□□□□ -1.88
SEMA6A-213ENST00000514316 NCR2O95944 276 aa3.28□□□□□ -1.88
SEMA6A-213ENST00000514316 ZNF25P17030 456 aaPredicted RBP3.28□□□□□ -1.88
SEMA6A-213ENST00000514316 CD164Q04900 197 aa3.28□□□□□ -1.88
SEMA6A-213ENST00000514316 C19orf71A6NCJ1 209 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms