RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 PTPRQQ9UMZ3 2332 aa0.62□□□□□ -2.31
CALCOCO2-222ENST00000514006 ABCC2Q92887 1545 aa0.62□□□□□ -2.31
CALCOCO2-222ENST00000514006 TULP4Q9NRJ4 1543 aa0.62□□□□□ -2.31
CALCOCO2-222ENST00000514006 TROQ12816 1431 aaPredicted RBP0.62□□□□□ -2.31
CALCOCO2-222ENST00000514006 MAST4O15021 2626 aa0.62□□□□□ -2.31
CALCOCO2-222ENST00000514006 TTC37Q6PGP7 1564 aa0.62□□□□□ -2.31
CALCOCO2-222ENST00000514006 NRXN1Q9ULB1 1477 aa0.61□□□□□ -2.31
CALCOCO2-222ENST00000514006 LINC00959A0A1B0GUT2 108 aa0.61□□□□□ -2.31
CALCOCO2-222ENST00000514006 Q9H521 79 aa0.61□□□□□ -2.31
CALCOCO2-222ENST00000514006 BAZ1AQ9NRL2 1556 aaPredicted RBP0.61□□□□□ -2.31
CALCOCO2-222ENST00000514006 PKDREJQ9NTG1 2253 aa0.61□□□□□ -2.31
CALCOCO2-222ENST00000514006 TSC2P49815 1807 aa0.6□□□□□ -2.31
CALCOCO2-222ENST00000514006 ARMS2P0C7Q2 107 aa0.6□□□□□ -2.31
CALCOCO2-222ENST00000514006 MON2Q7Z3U7 1717 aa0.6□□□□□ -2.31
CALCOCO2-222ENST00000514006 AKAP6Q13023 2319 aa0.6□□□□□ -2.31
CALCOCO2-222ENST00000514006 PPRC1Q5VV67 1664 aaKnown RBP0.59□□□□□ -2.31
CALCOCO2-222ENST00000514006 GYPAP02724 150 aa0.59□□□□□ -2.31
CALCOCO2-222ENST00000514006 ZNF720Q7Z2F6 126 aa0.59□□□□□ -2.31
CALCOCO2-222ENST00000514006 DEFB107AQ8IZN7 70 aa0.59□□□□□ -2.31
CALCOCO2-222ENST00000514006 DEFB123Q8N688 67 aa0.59□□□□□ -2.31
CALCOCO2-222ENST00000514006 RGPD3A6NKT7 1758 aaPredicted RBP0.59□□□□□ -2.32
CALCOCO2-222ENST00000514006 TARBP1Q13395 1621 aaKnown RBP0.59□□□□□ -2.32
CALCOCO2-222ENST00000514006 URB1O60287 2271 aaKnown RBP0.58□□□□□ -2.32
CALCOCO2-222ENST00000514006 SETBP1Q9Y6X0 1596 aa0.58□□□□□ -2.32
CALCOCO2-222ENST00000514006 H0Y9P7 68 aa0.58□□□□□ -2.32
CALCOCO2-222ENST00000514006 ETDBQ3ZM63 59 aa0.58□□□□□ -2.32
CALCOCO2-222ENST00000514006 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
CALCOCO2-222ENST00000514006 A0A1B0GU69 56 aa0.57□□□□□ -2.32
CALCOCO2-222ENST00000514006 Q5VSD8 79 aa0.57□□□□□ -2.32
CALCOCO2-222ENST00000514006 U3KQA8 63 aa0.57□□□□□ -2.32
CALCOCO2-222ENST00000514006 V9GYS6 101 aa0.57□□□□□ -2.32
CALCOCO2-222ENST00000514006 SPTBN1Q01082 2364 aaKnown RBP0.57□□□□□ -2.32
CALCOCO2-222ENST00000514006 EPRSP07814 1512 aaKnown RBP0.57□□□□□ -2.32
CALCOCO2-222ENST00000514006 SMARCA2P51531 1590 aa0.57□□□□□ -2.32
CALCOCO2-222ENST00000514006 IGSF10Q6WRI0 2623 aa0.56□□□□□ -2.32
CALCOCO2-222ENST00000514006 C5P01031 1676 aa0.56□□□□□ -2.32
CALCOCO2-222ENST00000514006 FANCAO15360 1455 aa0.56□□□□□ -2.32
CALCOCO2-222ENST00000514006 GNGT1P63211 74 aa0.56□□□□□ -2.32
CALCOCO2-222ENST00000514006 HMGN3Q15651 99 aa0.56□□□□□ -2.32
CALCOCO2-222ENST00000514006 C6orf201Q7Z4U5 140 aa0.56□□□□□ -2.32
CALCOCO2-222ENST00000514006 NCOR2Q9Y618 2525 aa0.55□□□□□ -2.32
CALCOCO2-222ENST00000514006 F8WEM9 126 aa0.55□□□□□ -2.32
CALCOCO2-222ENST00000514006 COX6B1P14854 86 aa0.55□□□□□ -2.32
CALCOCO2-222ENST00000514006 KIAA1551Q9HCM1 1747 aa0.55□□□□□ -2.32
CALCOCO2-222ENST00000514006 CRYBG1Q9Y4K1 1723 aa0.55□□□□□ -2.32
CALCOCO2-222ENST00000514006 ATP10BO94823 1461 aa0.54□□□□□ -2.32
CALCOCO2-222ENST00000514006 CSMD3Q7Z407 3707 aa0.54□□□□□ -2.32
CALCOCO2-222ENST00000514006 DEFB109BQ30KR1 87 aa0.54□□□□□ -2.32
CALCOCO2-222ENST00000514006 C20orf78Q9BR46 151 aa0.54□□□□□ -2.32
CALCOCO2-222ENST00000514006 PSENENQ9NZ42 101 aa0.54□□□□□ -2.32
CALCOCO2-222ENST00000514006 FAT4Q6V0I7 4981 aa0.54□□□□□ -2.32
CALCOCO2-222ENST00000514006 KIF20BQ96Q89 1820 aa0.53□□□□□ -2.32
CALCOCO2-222ENST00000514006 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
CALCOCO2-222ENST00000514006 LEPROTL1O95214 131 aa0.53□□□□□ -2.32
CALCOCO2-222ENST00000514006 HIGD1BQ9P298 99 aa0.53□□□□□ -2.32
CALCOCO2-222ENST00000514006 GVINP1Q7Z2Y8 2422 aa0.53□□□□□ -2.33
CALCOCO2-222ENST00000514006 UBR5O95071 2799 aaPredicted RBP0.52□□□□□ -2.33
CALCOCO2-222ENST00000514006 SPRR1AP35321 89 aa0.52□□□□□ -2.33
CALCOCO2-222ENST00000514006 ALKAL2Q6UX46 152 aa0.52□□□□□ -2.33
CALCOCO2-222ENST00000514006 D6R8Y8 96 aa0.51□□□□□ -2.33
CALCOCO2-222ENST00000514006 K7EQZ3 153 aa0.51□□□□□ -2.33
CALCOCO2-222ENST00000514006 KIAA0556O60303 1618 aa0.51□□□□□ -2.33
CALCOCO2-222ENST00000514006 MUSTN1Q8IVN3 82 aa0.51□□□□□ -2.33
CALCOCO2-222ENST00000514006 UBR1Q8IWV7 1749 aa0.51□□□□□ -2.33
CALCOCO2-222ENST00000514006 MYO3AQ8NEV4 1616 aa0.51□□□□□ -2.33
CALCOCO2-222ENST00000514006 USMG5Q96IX5 58 aa0.51□□□□□ -2.33
CALCOCO2-222ENST00000514006 NCOR1O75376 2440 aa0.5□□□□□ -2.33
CALCOCO2-222ENST00000514006 IQSEC2Q5JU85 1478 aa0.5□□□□□ -2.33
CALCOCO2-222ENST00000514006 EDC4Q6P2E9 1401 aaKnown RBP0.5□□□□□ -2.33
CALCOCO2-222ENST00000514006 SMIM11AP58511 58 aa0.5□□□□□ -2.33
CALCOCO2-222ENST00000514006 VWFP04275 2813 aa0.5□□□□□ -2.33
CALCOCO2-222ENST00000514006 LRP1Q07954 4544 aaKnown RBP0.5□□□□□ -2.33
CALCOCO2-222ENST00000514006 FMN2Q9NZ56 1722 aa0.5□□□□□ -2.33
CALCOCO2-222ENST00000514006 CUX1P39880 1505 aa0.49□□□□□ -2.33
CALCOCO2-222ENST00000514006 PYY3Q5JQD4 70 aa0.49□□□□□ -2.33
CALCOCO2-222ENST00000514006 CELSR1Q9NYQ6 3014 aa0.48□□□□□ -2.33
CALCOCO2-222ENST00000514006 GPR98Q8WXG9 6306 aa0.48□□□□□ -2.33
CALCOCO2-222ENST00000514006 PKD1L3Q7Z443 1732 aa0.48□□□□□ -2.33
CALCOCO2-222ENST00000514006 SPRR1BP22528 89 aa0.48□□□□□ -2.33
CALCOCO2-222ENST00000514006 PEA15Q15121 130 aa0.48□□□□□ -2.33
CALCOCO2-222ENST00000514006 HRNRQ86YZ3 2850 aaPredicted RBP0.48□□□□□ -2.33
CALCOCO2-222ENST00000514006 CHD6Q8TD26 2715 aa0.48□□□□□ -2.33
CALCOCO2-222ENST00000514006 CCDC141Q6ZP82 1450 aa0.48□□□□□ -2.33
CALCOCO2-222ENST00000514006 CEP162Q5TB80 1403 aa0.47□□□□□ -2.33
CALCOCO2-222ENST00000514006 COL14A1Q05707 1796 aaKnown RBP0.47□□□□□ -2.33
CALCOCO2-222ENST00000514006 LRRC37AA6NMS7 1700 aa0.47□□□□□ -2.33
CALCOCO2-222ENST00000514006 GNG2P59768 71 aa0.47□□□□□ -2.33
CALCOCO2-222ENST00000514006 PVALEFA0A1B0GWK0 134 aa0.46□□□□□ -2.34
CALCOCO2-222ENST00000514006 COX8AP10176 69 aa0.46□□□□□ -2.34
CALCOCO2-222ENST00000514006 ABCC3O15438 1527 aa0.46□□□□□ -2.34
CALCOCO2-222ENST00000514006 PPLO60437 1756 aa0.46□□□□□ -2.34
CALCOCO2-222ENST00000514006 WNK2Q9Y3S1 2297 aa0.46□□□□□ -2.34
CALCOCO2-222ENST00000514006 SAMD9Q5K651 1589 aa0.45□□□□□ -2.34
CALCOCO2-222ENST00000514006 K7EP34 96 aa0.44□□□□□ -2.34
CALCOCO2-222ENST00000514006 HMGN2P05204 90 aaKnown RBP0.44□□□□□ -2.34
CALCOCO2-222ENST00000514006 HIVEP3Q5T1R4 2406 aa0.44□□□□□ -2.34
CALCOCO2-222ENST00000514006 ABCA2Q9BZC7 2435 aa0.43□□□□□ -2.34
CALCOCO2-222ENST00000514006 CRIPTQ9P021 101 aa0.43□□□□□ -2.34
CALCOCO2-222ENST00000514006 SLIT1O75093 1534 aa0.43□□□□□ -2.34
CALCOCO2-222ENST00000514006 TENM4Q6N022 2769 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms