RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 PRR34Q9NV39 138 aa2.56□□□□□ -2
AFP-205ENST00000513720 IGKV2-40A0A087WW87 121 aaPredicted RBP2.55□□□□□ -2
AFP-205ENST00000513720 H3BRN7 92 aa2.55□□□□□ -2
AFP-205ENST00000513720 IGKV2D-40P01614 121 aaPredicted RBP2.55□□□□□ -2
AFP-205ENST00000513720 IGLV1-40P01703 118 aa2.55□□□□□ -2
AFP-205ENST00000513720 COX17Q14061 63 aa2.55□□□□□ -2
AFP-205ENST00000513720 TMEM105Q8N8V8 129 aa2.55□□□□□ -2
AFP-205ENST00000513720 LEAP2Q969E1 77 aa2.55□□□□□ -2
AFP-205ENST00000513720 MALRD1Q5VYJ5 2156 aa2.54□□□□□ -2
AFP-205ENST00000513720 IGLV7-46A0A075B6I9 117 aa2.54□□□□□ -2
AFP-205ENST00000513720 A0A1B0GU69 56 aa2.54□□□□□ -2
AFP-205ENST00000513720 TRBV6-4A0A1B0GX49 114 aa2.54□□□□□ -2
AFP-205ENST00000513720 LINC01565O15544 149 aa2.54□□□□□ -2
AFP-205ENST00000513720 STATHP02808 62 aa2.54□□□□□ -2
AFP-205ENST00000513720 Q6YL49 198 aa2.54□□□□□ -2
AFP-205ENST00000513720 SPRR4Q96PI1 79 aa2.54□□□□□ -2
AFP-205ENST00000513720 SPAG17Q6Q759 2223 aa2.53□□□□□ -2
AFP-205ENST00000513720 LINC00959A0A1B0GUT2 108 aa2.53□□□□□ -2
AFP-205ENST00000513720 IGLV7-43P04211 117 aa2.53□□□□□ -2
AFP-205ENST00000513720 DEFB134Q4QY38 66 aa2.53□□□□□ -2
AFP-205ENST00000513720 IGFL4Q6B9Z1 124 aa2.53□□□□□ -2
AFP-205ENST00000513720 Q6ZQY7 126 aa2.53□□□□□ -2
AFP-205ENST00000513720 C15orf56Q8N910 161 aa2.53□□□□□ -2
AFP-205ENST00000513720 C16orf74Q96GX8 76 aa2.53□□□□□ -2
AFP-205ENST00000513720 COL4A2P08572 1712 aa2.52□□□□□ -2.01
AFP-205ENST00000513720 ZNF861PO60384 105 aa2.52□□□□□ -2.01
AFP-205ENST00000513720 SLURP1P55000 103 aa2.52□□□□□ -2.01
AFP-205ENST00000513720 KRTAP26-1Q6PEX3 210 aa2.52□□□□□ -2.01
AFP-205ENST00000513720 ST20-AS1Q8NBB2 130 aa2.52□□□□□ -2.01
AFP-205ENST00000513720 C4orf3Q8WVX3 66 aa2.52□□□□□ -2.01
AFP-205ENST00000513720 IGKV2-28A0A075B6P5 120 aa2.51□□□□□ -2.01
AFP-205ENST00000513720 TRGV1A0A0A0MS02 117 aa2.51□□□□□ -2.01
AFP-205ENST00000513720 IGKV3OR2-268A0A0C4DH90 116 aa2.51□□□□□ -2.01
AFP-205ENST00000513720 A0A1W2PNU3 283 aaPredicted RBP2.51□□□□□ -2.01
AFP-205ENST00000513720 DEFB108AA8MXU0 73 aa2.51□□□□□ -2.01
AFP-205ENST00000513720 PANO1I0J062 215 aa2.51□□□□□ -2.01
AFP-205ENST00000513720 IGKV2D-28P01615 120 aa2.51□□□□□ -2.01
AFP-205ENST00000513720 Q5W150 140 aa2.51□□□□□ -2.01
AFP-205ENST00000513720 LINC00575Q6W349 94 aa2.51□□□□□ -2.01
AFP-205ENST00000513720 Q8N9L7 120 aa2.51□□□□□ -2.01
AFP-205ENST00000513720 C9orf163Q8N9P6 203 aa2.51□□□□□ -2.01
AFP-205ENST00000513720 RPL39P5Q59GN2 51 aa2.5□□□□□ -2.01
AFP-205ENST00000513720 TMEM167AQ8TBQ9 72 aa2.5□□□□□ -2.01
AFP-205ENST00000513720 CDKN2A-AS1Q9UH64 79 aa2.5□□□□□ -2.01
AFP-205ENST00000513720 ZFHX3Q15911 3703 aa2.5□□□□□ -2.01
AFP-205ENST00000513720 M0R2N4 97 aa2.49□□□□□ -2.01
AFP-205ENST00000513720 KLK12Q9UKR0 248 aa2.49□□□□□ -2.01
AFP-205ENST00000513720 SEC16AO15027 2179 aa2.49□□□□□ -2.01
AFP-205ENST00000513720 KNTC1P50748 2209 aa2.48□□□□□ -2.01
AFP-205ENST00000513720 UNC13CQ8NB66 2214 aa2.48□□□□□ -2.01
AFP-205ENST00000513720 DEFB131BA0A096LNP1 70 aa2.48□□□□□ -2.01
AFP-205ENST00000513720 SPINK14Q6IE38 97 aa2.48□□□□□ -2.01
AFP-205ENST00000513720 Q8IZM0 81 aa2.48□□□□□ -2.01
AFP-205ENST00000513720 LINC00612Q8N6U2 182 aa2.48□□□□□ -2.01
AFP-205ENST00000513720 WT1-ASQ06250 92 aa2.47□□□□□ -2.01
AFP-205ENST00000513720 RNF5Q99942 180 aa2.47□□□□□ -2.01
AFP-205ENST00000513720 SDK1Q7Z5N4 2213 aa2.47□□□□□ -2.01
AFP-205ENST00000513720 PRRC2BQ5JSZ5 2229 aaKnown RBP2.46□□□□□ -2.01
AFP-205ENST00000513720 ACYP2P14621 99 aa2.46□□□□□ -2.02
AFP-205ENST00000513720 A0A1B0GU33 70 aa2.45□□□□□ -2.02
AFP-205ENST00000513720 H0YGG7 62 aa2.45□□□□□ -2.02
AFP-205ENST00000513720 M0QY20 66 aa2.45□□□□□ -2.02
AFP-205ENST00000513720 RPL37AP61513 92 aaKnown RBP2.45□□□□□ -2.02
AFP-205ENST00000513720 MRGPRG-AS1Q2M3A8 158 aa2.45□□□□□ -2.02
AFP-205ENST00000513720 KRTAP15-1Q3LI76 137 aa2.45□□□□□ -2.02
AFP-205ENST00000513720 PATE1Q8WXA2 126 aa2.45□□□□□ -2.02
AFP-205ENST00000513720 COL4A5P29400 1685 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 F5P12259 2224 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 IGKV2D-24A0A075B6R9 120 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 A0A087WTM6 91 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 HRES1P13985 223 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 LINC00315P59091 139 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 DEFB116Q30KQ4 102 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 SSBP3-AS1Q7Z2R9 100 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 Q8N377 158 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 DEFB104AQ8WTQ1 72 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 LINC00472Q9H8W2 130 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 TOMM7Q9P0U1 55 aa2.44□□□□□ -2.02
AFP-205ENST00000513720 COL27A1Q8IZC6 1860 aaPredicted RBP2.43□□□□□ -2.02
AFP-205ENST00000513720 SPTY2D1-AS1A0A0U1RR47 76 aa2.43□□□□□ -2.02
AFP-205ENST00000513720 I3L2K1 104 aa2.43□□□□□ -2.02
AFP-205ENST00000513720 PROK1P58294 105 aa2.43□□□□□ -2.02
AFP-205ENST00000513720 TP53AIP1Q9HCN2 124 aa2.43□□□□□ -2.02
AFP-205ENST00000513720 COX6A2Q02221 97 aa2.42□□□□□ -2.02
AFP-205ENST00000513720 WFDC10BQ8IUB3 73 aa2.42□□□□□ -2.02
AFP-205ENST00000513720 WFDC13Q8IUB5 93 aa2.42□□□□□ -2.02
AFP-205ENST00000513720 WWC2-AS2Q96NR7 200 aa2.42□□□□□ -2.02
AFP-205ENST00000513720 CCL19Q99731 98 aa2.42□□□□□ -2.02
AFP-205ENST00000513720 CADP27708 2225 aa2.41□□□□□ -2.02
AFP-205ENST00000513720 MED13LQ71F56 2210 aa2.41□□□□□ -2.02
AFP-205ENST00000513720 A0A096LNT2 108 aa2.41□□□□□ -2.02
AFP-205ENST00000513720 ANGP03950 147 aaKnown RBP2.41□□□□□ -2.02
AFP-205ENST00000513720 PLA2G2AP14555 144 aa2.41□□□□□ -2.02
AFP-205ENST00000513720 Q8N1X5 172 aa2.41□□□□□ -2.02
AFP-205ENST00000513720 C5orf56Q8N8D9 126 aa2.41□□□□□ -2.02
AFP-205ENST00000513720 Q96NJ1 140 aa2.41□□□□□ -2.02
AFP-205ENST00000513720 ABCA4P78363 2273 aa2.41□□□□□ -2.02
AFP-205ENST00000513720 RP1P56715 2156 aa2.41□□□□□ -2.02
AFP-205ENST00000513720 SORL1Q92673 2214 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms