RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SPAG11AQ6PDA7 123 aa6.18□□□□□ -1.42
DDX41-216ENST00000513562 Q6ZN92 141 aa6.18□□□□□ -1.42
DDX41-216ENST00000513562 LINC01551Q86U37 167 aa6.18□□□□□ -1.42
DDX41-216ENST00000513562 Q8IZM0 81 aa6.18□□□□□ -1.42
DDX41-216ENST00000513562 SMIM7Q9BQ49 75 aa6.18□□□□□ -1.42
DDX41-216ENST00000513562 OSTCQ9NRP0 149 aa6.18□□□□□ -1.42
DDX41-216ENST00000513562 TOMM7Q9P0U1 55 aa6.18□□□□□ -1.42
DDX41-216ENST00000513562 CKS2P33552 79 aa6.17□□□□□ -1.42
DDX41-216ENST00000513562 PNRC1Q12796 327 aaPredicted RBP6.17□□□□□ -1.42
DDX41-216ENST00000513562 FAM74A3Q4VXF1 159 aa6.17□□□□□ -1.42
DDX41-216ENST00000513562 C6orf226Q5I0X4 101 aa6.17□□□□□ -1.42
DDX41-216ENST00000513562 C3orf22Q8N5N4 141 aa6.17□□□□□ -1.42
DDX41-216ENST00000513562 TMEM141Q96I45 108 aa6.17□□□□□ -1.42
DDX41-216ENST00000513562 IGLV5-37A0A075B6J1 123 aa6.16□□□□□ -1.42
DDX41-216ENST00000513562 F8VRH5 84 aa6.16□□□□□ -1.42
DDX41-216ENST00000513562 MT1HP80294 61 aa6.16□□□□□ -1.42
DDX41-216ENST00000513562 TEX43Q6ZNM6 134 aa6.16□□□□□ -1.42
DDX41-216ENST00000513562 ALKBH7Q9BT30 221 aaPredicted RBP6.16□□□□□ -1.42
DDX41-216ENST00000513562 V9GYV3 84 aa6.16□□□□□ -1.42
DDX41-216ENST00000513562 C9JQL5 133 aa6.15□□□□□ -1.42
DDX41-216ENST00000513562 F8W036 122 aa6.15□□□□□ -1.42
DDX41-216ENST00000513562 NPYP01303 97 aa6.15□□□□□ -1.42
DDX41-216ENST00000513562 CFC1BP0CG36 223 aa6.15□□□□□ -1.42
DDX41-216ENST00000513562 KRTAP19-2Q3LHN2 52 aa6.15□□□□□ -1.42
DDX41-216ENST00000513562 C2orf88Q9BSF0 95 aa6.15□□□□□ -1.42
DDX41-216ENST00000513562 NAT8Q9UHE5 227 aa6.15□□□□□ -1.42
DDX41-216ENST00000513562 NAT8BQ9UHF3 227 aa6.15□□□□□ -1.42
DDX41-216ENST00000513562 TMEM218A2RU14 115 aa6.14□□□□□ -1.43
DDX41-216ENST00000513562 D6R8Y8 96 aa6.14□□□□□ -1.43
DDX41-216ENST00000513562 PRLHP81277 87 aa6.14□□□□□ -1.43
DDX41-216ENST00000513562 ADIRFQ15847 76 aa6.13□□□□□ -1.43
DDX41-216ENST00000513562 ZC2HC1BQ5TFG8 222 aa6.13□□□□□ -1.43
DDX41-216ENST00000513562 NKAPP1Q8N9T2 125 aa6.13□□□□□ -1.43
DDX41-216ENST00000513562 PLEKHB2Q96CS7 222 aa6.13□□□□□ -1.43
DDX41-216ENST00000513562 AMELXQ99217 191 aa6.13□□□□□ -1.43
DDX41-216ENST00000513562 SEC11CQ9BY50 192 aa6.13□□□□□ -1.43
DDX41-216ENST00000513562 IGKV2-28A0A075B6P5 120 aa6.12□□□□□ -1.43
DDX41-216ENST00000513562 A0A1B0GW15 77 aa6.12□□□□□ -1.43
DDX41-216ENST00000513562 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
DDX41-216ENST00000513562 IGKV2D-28P01615 120 aa6.12□□□□□ -1.43
DDX41-216ENST00000513562 RAB5AP20339 215 aa6.12□□□□□ -1.43
DDX41-216ENST00000513562 LORP23490 312 aaPredicted RBP6.12□□□□□ -1.43
DDX41-216ENST00000513562 CXCL5P42830 114 aa6.12□□□□□ -1.43
DDX41-216ENST00000513562 FAM19A3Q7Z5A8 133 aa6.12□□□□□ -1.43
DDX41-216ENST00000513562 SLC7A5P1Q8MH63 180 aa6.12□□□□□ -1.43
DDX41-216ENST00000513562 SCO1O75880 301 aa6.11□□□□□ -1.43
DDX41-216ENST00000513562 ADCYAP1P18509 176 aa6.11□□□□□ -1.43
DDX41-216ENST00000513562 RPL23P62829 140 aaKnown RBP6.11□□□□□ -1.43
DDX41-216ENST00000513562 FAM19A1Q7Z5A9 133 aa6.11□□□□□ -1.43
DDX41-216ENST00000513562 CDKN2A-AS1Q9UH64 79 aa6.11□□□□□ -1.43
DDX41-216ENST00000513562 SMIM27A0A1W2PRY6 76 aa6.1□□□□□ -1.43
DDX41-216ENST00000513562 PPBPP02775 128 aa6.1□□□□□ -1.43
DDX41-216ENST00000513562 C4orf48Q5BLP8 95 aa6.1□□□□□ -1.43
DDX41-216ENST00000513562 XP32Q5T750 250 aa6.1□□□□□ -1.43
DDX41-216ENST00000513562 C2orf66Q6UXQ4 117 aa6.1□□□□□ -1.43
DDX41-216ENST00000513562 TMEM126AQ9H061 195 aa6.1□□□□□ -1.43
DDX41-216ENST00000513562 VCX2Q9H322 139 aa6.1□□□□□ -1.43
DDX41-216ENST00000513562 TMEM238C9JI98 176 aa6.09□□□□□ -1.43
DDX41-216ENST00000513562 APOC3P02656 99 aa6.09□□□□□ -1.43
DDX41-216ENST00000513562 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
DDX41-216ENST00000513562 HERVK_113P63121 156 aa6.09□□□□□ -1.43
DDX41-216ENST00000513562 SVBPQ8N300 66 aa6.09□□□□□ -1.43
DDX41-216ENST00000513562 GNB1LQ9BYB4 327 aa6.09□□□□□ -1.43
DDX41-216ENST00000513562 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.08□□□□□ -1.44
DDX41-216ENST00000513562 SNAPINO95295 136 aa6.08□□□□□ -1.44
DDX41-216ENST00000513562 MT-ND4LP03901 98 aa6.08□□□□□ -1.44
DDX41-216ENST00000513562 NPSP0C0P6 89 aa6.08□□□□□ -1.44
DDX41-216ENST00000513562 SEC11AP67812 179 aa6.08□□□□□ -1.44
DDX41-216ENST00000513562 CBLN2Q8IUK8 224 aa6.08□□□□□ -1.44
DDX41-216ENST00000513562 ORMDL3Q8N138 153 aa6.08□□□□□ -1.44
DDX41-216ENST00000513562 DAND5Q8N907 189 aa6.08□□□□□ -1.44
DDX41-216ENST00000513562 SPRR4Q96PI1 79 aa6.08□□□□□ -1.44
DDX41-216ENST00000513562 CYSLTR1Q9Y271 337 aa6.08□□□□□ -1.44
DDX41-216ENST00000513562 A0A1B0GXF2 115 aa6.07□□□□□ -1.44
DDX41-216ENST00000513562 IGIPA6NJ69 53 aa6.07□□□□□ -1.44
DDX41-216ENST00000513562 M0R378 163 aa6.07□□□□□ -1.44
DDX41-216ENST00000513562 SPINK1P00995 79 aa6.07□□□□□ -1.44
DDX41-216ENST00000513562 S100A8P05109 93 aa6.07□□□□□ -1.44
DDX41-216ENST00000513562 RHEBQ15382 184 aa6.07□□□□□ -1.44
DDX41-216ENST00000513562 C10orf91Q5T1B1 145 aa6.07□□□□□ -1.44
DDX41-216ENST00000513562 Q8NBF4 154 aa6.07□□□□□ -1.44
DDX41-216ENST00000513562 ANAPC16Q96DE5 110 aa6.07□□□□□ -1.44
DDX41-216ENST00000513562 PRSS47A8MTI9 375 aa6.06□□□□□ -1.44
DDX41-216ENST00000513562 SMIM1B2RUZ4 78 aa6.06□□□□□ -1.44
DDX41-216ENST00000513562 MRPL54Q6P161 138 aaKnown RBP6.06□□□□□ -1.44
DDX41-216ENST00000513562 TMEM136Q6ZRR5 245 aa6.06□□□□□ -1.44
DDX41-216ENST00000513562 PRELID3AQ96N28 172 aa6.06□□□□□ -1.44
DDX41-216ENST00000513562 HIGD2AQ9BW72 106 aa6.06□□□□□ -1.44
DDX41-216ENST00000513562 GEMIN7Q9H840 131 aaKnown RBP6.06□□□□□ -1.44
DDX41-216ENST00000513562 NDUFA12Q9UI09 145 aa6.06□□□□□ -1.44
DDX41-216ENST00000513562 VPREB1P12018 145 aa6.05□□□□□ -1.44
DDX41-216ENST00000513562 RAB5BP61020 215 aa6.05□□□□□ -1.44
DDX41-216ENST00000513562 COX7B2Q8TF08 81 aa6.05□□□□□ -1.44
DDX41-216ENST00000513562 RPS10P5Q9NQ39 176 aa6.05□□□□□ -1.44
DDX41-216ENST00000513562 ATP6V1G1O75348 118 aa6.04□□□□□ -1.44
DDX41-216ENST00000513562 S100A1P23297 94 aa6.04□□□□□ -1.44
DDX41-216ENST00000513562 S100PP25815 95 aa6.04□□□□□ -1.44
DDX41-216ENST00000513562 PDZD11Q5EBL8 140 aa6.04□□□□□ -1.44
DDX41-216ENST00000513562 FAM19A2Q8N3H0 131 aa6.04□□□□□ -1.44
DDX41-216ENST00000513562 LOC389332A0A1B0GUA5 103 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms