RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 HAMPP81172 84 aa13.45□□□□□ -0.26
NEIL3-202ENST00000513321 C6orf48Q9UBA6 75 aa13.45□□□□□ -0.26
NEIL3-202ENST00000513321 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.45□□□□□ -0.26
NEIL3-202ENST00000513321 PANO1I0J062 215 aa13.44□□□□□ -0.26
NEIL3-202ENST00000513321 DPM2O94777 84 aa13.44□□□□□ -0.26
NEIL3-202ENST00000513321 PLNP26678 52 aa13.44□□□□□ -0.26
NEIL3-202ENST00000513321 HIST3H2BBQ8N257 126 aa13.44□□□□□ -0.26
NEIL3-202ENST00000513321 KIAA1109Q2LD37 5005 aa13.44□□□□□ -0.26
NEIL3-202ENST00000513321 TMEM223A0PJW6 202 aa13.44□□□□□ -0.26
NEIL3-202ENST00000513321 C3orf79P0CE67 100 aa13.44□□□□□ -0.26
NEIL3-202ENST00000513321 CHTF8P0CG12 524 aa13.44□□□□□ -0.26
NEIL3-202ENST00000513321 PKIGQ9Y2B9 76 aa13.44□□□□□ -0.26
NEIL3-202ENST00000513321 APOBP04114 4563 aaKnown RBP13.43□□□□□ -0.26
NEIL3-202ENST00000513321 TRBV30A0A0K0K1B3 111 aa13.43□□□□□ -0.26
NEIL3-202ENST00000513321 LOC107984640A0A0U1RRK4 108 aa13.43□□□□□ -0.26
NEIL3-202ENST00000513321 PET117Q6UWS5 81 aa13.43□□□□□ -0.26
NEIL3-202ENST00000513321 DNAH8Q96JB1 4490 aa13.43□□□□□ -0.26
NEIL3-202ENST00000513321 IGKCP01834 107 aa13.42□□□□□ -0.26
NEIL3-202ENST00000513321 CXCL5P42830 114 aa13.42□□□□□ -0.26
NEIL3-202ENST00000513321 KRTDAPP60985 99 aa13.42□□□□□ -0.26
NEIL3-202ENST00000513321 DPH3Q96FX2 82 aa13.42□□□□□ -0.26
NEIL3-202ENST00000513321 A0A096LNI7 61 aa13.41□□□□□ -0.26
NEIL3-202ENST00000513321 IGKV2-24A0A0C4DH68 120 aa13.41□□□□□ -0.26
NEIL3-202ENST00000513321 S100A2P29034 98 aa13.41□□□□□ -0.26
NEIL3-202ENST00000513321 SNRPEP62304 92 aaKnown RBP13.41□□□□□ -0.26
NEIL3-202ENST00000513321 GAGE2BQ13066 116 aa13.4□□□□□ -0.26
NEIL3-202ENST00000513321 CIRBPQ14011 172 aaKnown RBP13.4□□□□□ -0.26
NEIL3-202ENST00000513321 C9orf116Q5BN46 136 aaPredicted RBP13.4□□□□□ -0.26
NEIL3-202ENST00000513321 SCXQ7RTU7 201 aa13.4□□□□□ -0.26
NEIL3-202ENST00000513321 LINC01545Q5VT33 79 aa13.39□□□□□ -0.27
NEIL3-202ENST00000513321 CIRBP-AS1Q8TBR5 109 aa13.39□□□□□ -0.27
NEIL3-202ENST00000513321 HIST1H2BLQ99880 126 aa13.39□□□□□ -0.27
NEIL3-202ENST00000513321 RPL18AQ02543 176 aaKnown RBP13.39□□□□□ -0.27
NEIL3-202ENST00000513321 SPACA4Q8TDM5 124 aa13.39□□□□□ -0.27
NEIL3-202ENST00000513321 TLX1NBP0CAT3 122 aa13.38□□□□□ -0.27
NEIL3-202ENST00000513321 PTTG1IPP53801 180 aa13.38□□□□□ -0.27
NEIL3-202ENST00000513321 MAJINQ3KP22 176 aa13.38□□□□□ -0.27
NEIL3-202ENST00000513321 C5orf52A6NGY3 159 aa13.37□□□□□ -0.27
NEIL3-202ENST00000513321 LINC00474Q9P2X8 69 aa13.37□□□□□ -0.27
NEIL3-202ENST00000513321 Q6ZRP5 223 aa13.35□□□□□ -0.27
NEIL3-202ENST00000513321 HSPG2P98160 4391 aa13.35□□□□□ -0.27
NEIL3-202ENST00000513321 A0A087WYN8 130 aa13.34□□□□□ -0.27
NEIL3-202ENST00000513321 NDUFC2-KCTD14E9PQ53 114 aa13.34□□□□□ -0.27
NEIL3-202ENST00000513321 RYR1P21817 5038 aa13.34□□□□□ -0.27
NEIL3-202ENST00000513321 SMR3BP02814 79 aaPredicted RBP13.34□□□□□ -0.27
NEIL3-202ENST00000513321 HERVK_113P61574 105 aa13.34□□□□□ -0.27
NEIL3-202ENST00000513321 GAGE2EQ4V326 116 aa13.34□□□□□ -0.27
NEIL3-202ENST00000513321 GAGE2DQ9UEU5 116 aa13.34□□□□□ -0.27
NEIL3-202ENST00000513321 STPG4Q8N801 248 aa13.33□□□□□ -0.28
NEIL3-202ENST00000513321 C20orf202A1L168 122 aa13.32□□□□□ -0.28
NEIL3-202ENST00000513321 ZNF625Q96I27 306 aaPredicted RBP13.32□□□□□ -0.28
NEIL3-202ENST00000513321 LEPROTO15243 131 aa13.31□□□□□ -0.28
NEIL3-202ENST00000513321 PLAC8Q9NZF1 115 aa13.31□□□□□ -0.28
NEIL3-202ENST00000513321 SFTA2Q6UW10 78 aa13.3□□□□□ -0.28
NEIL3-202ENST00000513321 PLEKHB2Q96CS7 222 aa13.3□□□□□ -0.28
NEIL3-202ENST00000513321 KRTAP17-1Q9BYP8 105 aa13.3□□□□□ -0.28
NEIL3-202ENST00000513321 TSPEAR-AS2P59090 65 aa13.29□□□□□ -0.28
NEIL3-202ENST00000513321 Q8N1X5 172 aa13.28□□□□□ -0.28
NEIL3-202ENST00000513321 NDUFA12Q9UI09 145 aa13.28□□□□□ -0.28
NEIL3-202ENST00000513321 A0A1W2PNN7 141 aa13.27□□□□□ -0.29
NEIL3-202ENST00000513321 E9PLD3 99 aa13.27□□□□□ -0.29
NEIL3-202ENST00000513321 J3QQQ9 107 aa13.27□□□□□ -0.29
NEIL3-202ENST00000513321 PFN2P35080 140 aa13.27□□□□□ -0.29
NEIL3-202ENST00000513321 ERG28Q9UKR5 140 aa13.27□□□□□ -0.29
NEIL3-202ENST00000513321 C9orf129Q5T035 196 aaKnown RBP13.25□□□□□ -0.29
NEIL3-202ENST00000513321 ATOH7Q8N100 152 aa13.25□□□□□ -0.29
NEIL3-202ENST00000513321 XAGE1AQ9HD64 81 aa13.25□□□□□ -0.29
NEIL3-202ENST00000513321 TMA7Q9Y2S6 64 aaKnown RBP13.25□□□□□ -0.29
NEIL3-202ENST00000513321 HERC2O95714 4834 aa13.25□□□□□ -0.29
NEIL3-202ENST00000513321 MYMXA0A1B0GTQ4 84 aa13.24□□□□□ -0.29
NEIL3-202ENST00000513321 LGALS3P17931 250 aaKnown RBP13.24□□□□□ -0.29
NEIL3-202ENST00000513321 AKR1D1P51857 326 aa13.23□□□□□ -0.29
NEIL3-202ENST00000513321 HERV-K104P63124 156 aa13.23□□□□□ -0.29
NEIL3-202ENST00000513321 COX17Q14061 63 aa13.23□□□□□ -0.29
NEIL3-202ENST00000513321 LINC00528Q8N1L1 170 aa13.23□□□□□ -0.29
NEIL3-202ENST00000513321 FAM168BA1KXE4 195 aa13.23□□□□□ -0.29
NEIL3-202ENST00000513321 EPM2AB3EWF7 344 aa13.23□□□□□ -0.29
NEIL3-202ENST00000513321 FAM229AH3BQW9 127 aa13.22□□□□□ -0.29
NEIL3-202ENST00000513321 NMUP48645 174 aa13.21□□□□□ -0.29
NEIL3-202ENST00000513321 LINC00158P58513 81 aa13.2□□□□□ -0.3
NEIL3-202ENST00000513321 FAT1Q14517 4588 aa13.2□□□□□ -0.3
NEIL3-202ENST00000513321 IGKV2D-26A0A0A0MRZ7 120 aa13.19□□□□□ -0.3
NEIL3-202ENST00000513321 A0A0U1RRA0 63 aa13.19□□□□□ -0.3
NEIL3-202ENST00000513321 MEIG1Q5JSS6 88 aa13.19□□□□□ -0.3
NEIL3-202ENST00000513321 SMIM13P0DJ93 91 aa13.18□□□□□ -0.3
NEIL3-202ENST00000513321 Q5VSD8 79 aa13.18□□□□□ -0.3
NEIL3-202ENST00000513321 FAM19A5Q7Z5A7 132 aaPredicted RBP13.18□□□□□ -0.3
NEIL3-202ENST00000513321 KRTAP7-1Q8IUC3 87 aa13.18□□□□□ -0.3
NEIL3-202ENST00000513321 LINC00587B1AMM8 73 aa13.18□□□□□ -0.3
NEIL3-202ENST00000513321 SCGB1D1O95968 90 aa13.18□□□□□ -0.3
NEIL3-202ENST00000513321 SND1-IT1Q9HBX3 110 aa13.18□□□□□ -0.3
NEIL3-202ENST00000513321 ANKRD39Q53RE8 183 aa13.17□□□□□ -0.3
NEIL3-202ENST00000513321 KRTAP4-5Q9BYR2 181 aa13.17□□□□□ -0.3
NEIL3-202ENST00000513321 C7orf33Q8WU49 177 aa13.16□□□□□ -0.3
NEIL3-202ENST00000513321 SERTAD4-AS1Q5TG53 156 aa13.15□□□□□ -0.3
NEIL3-202ENST00000513321 PHF5AQ7RTV0 110 aaKnown RBP13.14□□□□□ -0.31
NEIL3-202ENST00000513321 TTTY13Q9BZ97 58 aa13.13□□□□□ -0.31
NEIL3-202ENST00000513321 PLA2G1BP04054 148 aaKnown RBP13.13□□□□□ -0.31
NEIL3-202ENST00000513321 MIR7-3HGQ8N6C7 128 aa13.13□□□□□ -0.31
NEIL3-202ENST00000513321 A0A0J9YXY3 114 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms