RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.94□□□□□ -1.62
HMGXB3-204ENST00000513318 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
HMGXB3-204ENST00000513318 SMIM1B2RUZ4 78 aa4.94□□□□□ -1.62
HMGXB3-204ENST00000513318 SYS1-DBNDD2H3BUS1 97 aa4.94□□□□□ -1.62
HMGXB3-204ENST00000513318 C3orf79P0CE67 100 aa4.94□□□□□ -1.62
HMGXB3-204ENST00000513318 PLNP26678 52 aa4.94□□□□□ -1.62
HMGXB3-204ENST00000513318 CNBPP62633 177 aaKnown RBP4.94□□□□□ -1.62
HMGXB3-204ENST00000513318 TMEM170BQ5T4T1 132 aa4.94□□□□□ -1.62
HMGXB3-204ENST00000513318 PET117Q6UWS5 81 aa4.94□□□□□ -1.62
HMGXB3-204ENST00000513318 Q8IZM0 81 aa4.94□□□□□ -1.62
HMGXB3-204ENST00000513318 C2orf48Q96LS8 159 aa4.94□□□□□ -1.62
HMGXB3-204ENST00000513318 HIST1H2BLQ99880 126 aa4.94□□□□□ -1.62
HMGXB3-204ENST00000513318 C16orf90A8MZG2 172 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 F8WDY8 70 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 DPM2O94777 84 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 IGKCP01834 107 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 PRSS2P07478 247 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 SPINK8P0C7L1 97 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 SMIM6P0DI80 62 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 CXCL5P42830 114 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 KRTDAPP60985 99 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 LINC01545Q5VT33 79 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 LINC00526Q96FQ7 95 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 CARD19Q96LW7 228 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 CAMK2N2Q96S95 79 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 TOMM7Q9P0U1 55 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 PKHD1P08F94 4074 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
HMGXB3-204ENST00000513318 IGLV5-39A0A0G2JS06 123 aa4.92□□□□□ -1.62
HMGXB3-204ENST00000513318 C20orf202A1L168 122 aa4.92□□□□□ -1.62
HMGXB3-204ENST00000513318 NDUFA1O15239 70 aa4.92□□□□□ -1.62
HMGXB3-204ENST00000513318 FUSP35637 526 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGXB3-204ENST00000513318 SYCNQ0VAF6 134 aa4.92□□□□□ -1.62
HMGXB3-204ENST00000513318 KIAA0087Q14695 138 aa4.92□□□□□ -1.62
HMGXB3-204ENST00000513318 C9orf163Q8N9P6 203 aa4.92□□□□□ -1.62
HMGXB3-204ENST00000513318 PKIGQ9Y2B9 76 aa4.92□□□□□ -1.62
HMGXB3-204ENST00000513318 TMEM223A0PJW6 202 aa4.91□□□□□ -1.62
HMGXB3-204ENST00000513318 SLPIP03973 132 aa4.91□□□□□ -1.62
HMGXB3-204ENST00000513318 GCSHP23434 173 aa4.91□□□□□ -1.62
HMGXB3-204ENST00000513318 AKR1D1P51857 326 aa4.91□□□□□ -1.62
HMGXB3-204ENST00000513318 CKS1BP61024 79 aa4.91□□□□□ -1.62
HMGXB3-204ENST00000513318 C6orf226Q5I0X4 101 aa4.91□□□□□ -1.62
HMGXB3-204ENST00000513318 COX7B2Q8TF08 81 aa4.91□□□□□ -1.62
HMGXB3-204ENST00000513318 C12orf57Q99622 126 aa4.91□□□□□ -1.62
HMGXB3-204ENST00000513318 PMCHL2Q9BQD1 86 aa4.91□□□□□ -1.62
HMGXB3-204ENST00000513318 TRBV30A0A0K0K1B3 111 aa4.9□□□□□ -1.63
HMGXB3-204ENST00000513318 HERVK_113P61574 105 aa4.9□□□□□ -1.63
HMGXB3-204ENST00000513318 RNF151Q2KHN1 245 aa4.9□□□□□ -1.63
HMGXB3-204ENST00000513318 SFTA2Q6UW10 78 aa4.9□□□□□ -1.63
HMGXB3-204ENST00000513318 Q6ZRU5 148 aa4.9□□□□□ -1.63
HMGXB3-204ENST00000513318 DNAH5Q8TE73 4624 aa4.9□□□□□ -1.63
HMGXB3-204ENST00000513318 LINC01620Q4KN68 170 aa4.89□□□□□ -1.63
HMGXB3-204ENST00000513318 C2orf82Q6UX34 121 aa4.89□□□□□ -1.63
HMGXB3-204ENST00000513318 UNQ6190/PRO20217Q6UXQ8 127 aa4.89□□□□□ -1.63
HMGXB3-204ENST00000513318 KRTAP10-1P60331 282 aa4.88□□□□□ -1.63
HMGXB3-204ENST00000513318 C10orf25Q5T742 122 aa4.88□□□□□ -1.63
HMGXB3-204ENST00000513318 PLEKHB2Q96CS7 222 aa4.88□□□□□ -1.63
HMGXB3-204ENST00000513318 C6orf48Q9UBA6 75 aa4.88□□□□□ -1.63
HMGXB3-204ENST00000513318 LOC107984640A0A0U1RRK4 108 aa4.87□□□□□ -1.63
HMGXB3-204ENST00000513318 E9PLD3 99 aa4.87□□□□□ -1.63
HMGXB3-204ENST00000513318 LEPROTO15243 131 aa4.87□□□□□ -1.63
HMGXB3-204ENST00000513318 TLX1NBP0CAT3 122 aa4.87□□□□□ -1.63
HMGXB3-204ENST00000513318 PYY3Q5JQD4 70 aa4.87□□□□□ -1.63
HMGXB3-204ENST00000513318 SDIM1Q6ZPB5 146 aa4.87□□□□□ -1.63
HMGXB3-204ENST00000513318 Q6ZSA8 131 aa4.87□□□□□ -1.63
HMGXB3-204ENST00000513318 A0A096LNI7 61 aa4.86□□□□□ -1.63
HMGXB3-204ENST00000513318 NDUFC2-KCTD14E9PQ53 114 aa4.86□□□□□ -1.63
HMGXB3-204ENST00000513318 J3QQQ9 107 aa4.86□□□□□ -1.63
HMGXB3-204ENST00000513318 NMUP48645 174 aa4.86□□□□□ -1.63
HMGXB3-204ENST00000513318 S100A12P80511 92 aa4.86□□□□□ -1.63
HMGXB3-204ENST00000513318 RPL18AQ02543 176 aaKnown RBP4.86□□□□□ -1.63
HMGXB3-204ENST00000513318 ZNF625Q96I27 306 aaPredicted RBP4.86□□□□□ -1.63
HMGXB3-204ENST00000513318 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
HMGXB3-204ENST00000513318 MYMXA0A1B0GTQ4 84 aa4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 SCGB1D1O95968 90 aa4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 LGALS3P17931 250 aaKnown RBP4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 PTTG1IPP53801 180 aa4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 TSPEAR-AS2P59090 65 aa4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 HERV-K104P63124 156 aa4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 CIRBPQ14011 172 aaKnown RBP4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 C9orf116Q5BN46 136 aaPredicted RBP4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 ATOH7Q8N100 152 aa4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 STPG4Q8N801 248 aa4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 LINC00474Q9P2X8 69 aa4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 NDUFA12Q9UI09 145 aa4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 DYNC1H1Q14204 4646 aaKnown RBP4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 EPPK1P58107 5090 aaKnown RBP4.85□□□□□ -1.63
HMGXB3-204ENST00000513318 LRP1BQ9NZR2 4599 aa4.84□□□□□ -1.63
HMGXB3-204ENST00000513318 IGKV2-24A0A0C4DH68 120 aa4.84□□□□□ -1.63
HMGXB3-204ENST00000513318 HSBP1L1C9JCN9 74 aa4.84□□□□□ -1.63
HMGXB3-204ENST00000513318 CDK2AP2O75956 126 aa4.84□□□□□ -1.63
HMGXB3-204ENST00000513318 CHTF8P0CG12 524 aa4.84□□□□□ -1.63
HMGXB3-204ENST00000513318 GAGE2BQ13066 116 aa4.84□□□□□ -1.63
HMGXB3-204ENST00000513318 COX17Q14061 63 aa4.84□□□□□ -1.63
HMGXB3-204ENST00000513318 JOSD1Q15040 202 aaPredicted RBP4.84□□□□□ -1.63
HMGXB3-204ENST00000513318 Q6ZRP5 223 aa4.84□□□□□ -1.63
HMGXB3-204ENST00000513318 SPACA4Q8TDM5 124 aa4.84□□□□□ -1.63
HMGXB3-204ENST00000513318 FAM30AQ9NZY2 134 aa4.84□□□□□ -1.63
HMGXB3-204ENST00000513318 ERG28Q9UKR5 140 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms