RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 FAT2Q9NYQ8 4349 aa8.19□□□□□ -1.1
PDPN-210ENST00000513143 HSBP1L1C9JCN9 74 aa8.19□□□□□ -1.1
PDPN-210ENST00000513143 F8WDY8 70 aa8.19□□□□□ -1.1
PDPN-210ENST00000513143 ANKRD39Q53RE8 183 aa8.19□□□□□ -1.1
PDPN-210ENST00000513143 C6orf226Q5I0X4 101 aa8.19□□□□□ -1.1
PDPN-210ENST00000513143 LINC00526Q96FQ7 95 aa8.19□□□□□ -1.1
PDPN-210ENST00000513143 C2orf48Q96LS8 159 aa8.19□□□□□ -1.1
PDPN-210ENST00000513143 IGKV2D-26A0A0A0MRZ7 120 aa8.18□□□□□ -1.1
PDPN-210ENST00000513143 J3QQQ9 107 aa8.18□□□□□ -1.1
PDPN-210ENST00000513143 EREGO14944 169 aa8.18□□□□□ -1.1
PDPN-210ENST00000513143 SLPIP03973 132 aa8.18□□□□□ -1.1
PDPN-210ENST00000513143 CXCL5P42830 114 aa8.17□□□□□ -1.1
PDPN-210ENST00000513143 TSPEAR-AS2P59090 65 aa8.17□□□□□ -1.1
PDPN-210ENST00000513143 CKS1BP61024 79 aa8.17□□□□□ -1.1
PDPN-210ENST00000513143 CDPF1Q6NVV7 123 aa8.17□□□□□ -1.1
PDPN-210ENST00000513143 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.16□□□□□ -1.1
PDPN-210ENST00000513143 LGALS3P17931 250 aaKnown RBP8.16□□□□□ -1.1
PDPN-210ENST00000513143 CNBPP62633 177 aaKnown RBP8.16□□□□□ -1.1
PDPN-210ENST00000513143 C2orf82Q6UX34 121 aa8.16□□□□□ -1.1
PDPN-210ENST00000513143 ZNF625Q96I27 306 aaPredicted RBP8.16□□□□□ -1.1
PDPN-210ENST00000513143 CAMK2N2Q96S95 79 aa8.16□□□□□ -1.1
PDPN-210ENST00000513143 VAMP8Q9BV40 100 aa8.16□□□□□ -1.1
PDPN-210ENST00000513143 NDUFA1O15239 70 aa8.15□□□□□ -1.1
PDPN-210ENST00000513143 SMIM6P0DI80 62 aa8.15□□□□□ -1.1
PDPN-210ENST00000513143 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
PDPN-210ENST00000513143 UNQ6190/PRO20217Q6UXQ8 127 aa8.15□□□□□ -1.1
PDPN-210ENST00000513143 Q6ZRU5 148 aa8.15□□□□□ -1.1
PDPN-210ENST00000513143 DNAH11Q96DT5 4516 aa8.14□□□□□ -1.11
PDPN-210ENST00000513143 NMUP48645 174 aa8.14□□□□□ -1.11
PDPN-210ENST00000513143 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
PDPN-210ENST00000513143 SFTA2Q6UW10 78 aa8.14□□□□□ -1.11
PDPN-210ENST00000513143 NDUFA12Q9UI09 145 aa8.14□□□□□ -1.11
PDPN-210ENST00000513143 PAM16Q9Y3D7 125 aa8.14□□□□□ -1.11
PDPN-210ENST00000513143 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.13□□□□□ -1.11
PDPN-210ENST00000513143 RNF151Q2KHN1 245 aa8.13□□□□□ -1.11
PDPN-210ENST00000513143 SPATA45Q537H7 98 aa8.13□□□□□ -1.11
PDPN-210ENST00000513143 CARD19Q96LW7 228 aa8.13□□□□□ -1.11
PDPN-210ENST00000513143 TRBV30A0A0K0K1B3 111 aa8.12□□□□□ -1.11
PDPN-210ENST00000513143 MYMXA0A1B0GTQ4 84 aa8.12□□□□□ -1.11
PDPN-210ENST00000513143 HERV-K104P63124 156 aa8.12□□□□□ -1.11
PDPN-210ENST00000513143 TTTY13Q9BZ97 58 aa8.12□□□□□ -1.11
PDPN-210ENST00000513143 C6orf48Q9UBA6 75 aa8.12□□□□□ -1.11
PDPN-210ENST00000513143 PKD1P98161 4303 aa8.12□□□□□ -1.11
PDPN-210ENST00000513143 A0A1B0GVY2 172 aa8.11□□□□□ -1.11
PDPN-210ENST00000513143 KRTAP10-2P60368 255 aa8.11□□□□□ -1.11
PDPN-210ENST00000513143 S100A12P80511 92 aa8.11□□□□□ -1.11
PDPN-210ENST00000513143 PCP2Q8IVA1 136 aa8.11□□□□□ -1.11
PDPN-210ENST00000513143 C9orf163Q8N9P6 203 aa8.11□□□□□ -1.11
PDPN-210ENST00000513143 IGLV5-52A0A0A0MRZ9 124 aa8.1□□□□□ -1.11
PDPN-210ENST00000513143 ZNF815PA8K554 130 aa8.1□□□□□ -1.11
PDPN-210ENST00000513143 COX8AP10176 69 aa8.09□□□□□ -1.11
PDPN-210ENST00000513143 FUSP35637 526 aaKnown RBP eCLIP8.09□□□□□ -1.11
PDPN-210ENST00000513143 C9orf116Q5BN46 136 aaPredicted RBP8.09□□□□□ -1.11
PDPN-210ENST00000513143 A0A0J9YXY3 114 aa8.08□□□□□ -1.12
PDPN-210ENST00000513143 FAM229AH3BQW9 127 aa8.08□□□□□ -1.12
PDPN-210ENST00000513143 TLX1NBP0CAT3 122 aa8.08□□□□□ -1.12
PDPN-210ENST00000513143 BOD1L2Q8IYS8 172 aa8.08□□□□□ -1.12
PDPN-210ENST00000513143 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
PDPN-210ENST00000513143 LINC00587B1AMM8 73 aa8.07□□□□□ -1.12
PDPN-210ENST00000513143 DLEU1O43261 78 aa8.07□□□□□ -1.12
PDPN-210ENST00000513143 COX17Q14061 63 aa8.07□□□□□ -1.12
PDPN-210ENST00000513143 C14orf144Q96I85 54 aa8.07□□□□□ -1.12
PDPN-210ENST00000513143 C12orf57Q99622 126 aa8.07□□□□□ -1.12
PDPN-210ENST00000513143 HECTD4Q9Y4D8 3996 aa8.07□□□□□ -1.12
PDPN-210ENST00000513143 LINC01620Q4KN68 170 aa8.06□□□□□ -1.12
PDPN-210ENST00000513143 MEIG1Q5JSS6 88 aa8.06□□□□□ -1.12
PDPN-210ENST00000513143 SDIM1Q6ZPB5 146 aa8.06□□□□□ -1.12
PDPN-210ENST00000513143 DNAH5Q8TE73 4624 aa8.06□□□□□ -1.12
PDPN-210ENST00000513143 LOC107984640A0A0U1RRK4 108 aa8.05□□□□□ -1.12
PDPN-210ENST00000513143 A6NJY4 79 aa8.05□□□□□ -1.12
PDPN-210ENST00000513143 NDUFC2-KCTD14E9PQ53 114 aa8.05□□□□□ -1.12
PDPN-210ENST00000513143 SMIM13P0DJ93 91 aa8.05□□□□□ -1.12
PDPN-210ENST00000513143 PFN2P35080 140 aa8.05□□□□□ -1.12
PDPN-210ENST00000513143 LINC00518Q8N0U6 118 aa8.05□□□□□ -1.12
PDPN-210ENST00000513143 PKIGQ9Y2B9 76 aa8.05□□□□□ -1.12
PDPN-210ENST00000513143 TIMM17BO60830 172 aa8.04□□□□□ -1.12
PDPN-210ENST00000513143 GCSHP23434 173 aa8.04□□□□□ -1.12
PDPN-210ENST00000513143 LINC00158P58513 81 aa8.04□□□□□ -1.12
PDPN-210ENST00000513143 CIRBPQ14011 172 aaKnown RBP8.04□□□□□ -1.12
PDPN-210ENST00000513143 SLC25A34Q6PIV7 304 aa8.04□□□□□ -1.12
PDPN-210ENST00000513143 SCGB1D4Q6XE38 83 aa8.04□□□□□ -1.12
PDPN-210ENST00000513143 Q6ZRP5 223 aa8.04□□□□□ -1.12
PDPN-210ENST00000513143 TP73-AS1Q9UF72 201 aa8.04□□□□□ -1.12
PDPN-210ENST00000513143 A0A0U1RRA0 63 aa8.03□□□□□ -1.12
PDPN-210ENST00000513143 LITAFQ99732 161 aa8.03□□□□□ -1.12
PDPN-210ENST00000513143 C16orf90A8MZG2 172 aa8.03□□□□□ -1.12
PDPN-210ENST00000513143 RPL18AQ02543 176 aaKnown RBP8.03□□□□□ -1.12
PDPN-210ENST00000513143 ADAMTSL4-AS1Q5T5F5 129 aa8.03□□□□□ -1.12
PDPN-210ENST00000513143 A0A096LNI7 61 aa8.02□□□□□ -1.13
PDPN-210ENST00000513143 PTTG1IPP53801 180 aa8.02□□□□□ -1.13
PDPN-210ENST00000513143 GAGE2BQ13066 116 aa8.02□□□□□ -1.13
PDPN-210ENST00000513143 MIR7-3HGQ8N6C7 128 aa8.02□□□□□ -1.13
PDPN-210ENST00000513143 KRTAP4-12Q9BQ66 201 aa8.02□□□□□ -1.13
PDPN-210ENST00000513143 PKHD1P08F94 4074 aa8.01□□□□□ -1.13
PDPN-210ENST00000513143 TMEM238C9JI98 176 aa8.01□□□□□ -1.13
PDPN-210ENST00000513143 GAGE2EQ4V326 116 aa8.01□□□□□ -1.13
PDPN-210ENST00000513143 PRO1933Q9H354 126 aa8.01□□□□□ -1.13
PDPN-210ENST00000513143 SND1-IT1Q9HBX3 110 aa8.01□□□□□ -1.13
PDPN-210ENST00000513143 HIGD1BQ9P298 99 aa8.01□□□□□ -1.13
PDPN-210ENST00000513143 UQCR10Q9UDW1 63 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms