RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 CAMK2N2Q96S95 79 aa5.88□□□□□ -1.47
TRIO-220ENST00000512979 SPANXA1Q9NS26 97 aa5.88□□□□□ -1.47
TRIO-220ENST00000512979 IGLV4-69A0A075B6H9 119 aa5.87□□□□□ -1.47
TRIO-220ENST00000512979 LOC107984640A0A0U1RRK4 108 aa5.87□□□□□ -1.47
TRIO-220ENST00000512979 IFITM10A6NMD0 228 aa5.87□□□□□ -1.47
TRIO-220ENST00000512979 IFI27P40305 119 aaPredicted RBP5.87□□□□□ -1.47
TRIO-220ENST00000512979 C5orf38Q86SI9 138 aa5.87□□□□□ -1.47
TRIO-220ENST00000512979 MAP1LC3AQ9H492 121 aa5.87□□□□□ -1.47
TRIO-220ENST00000512979 TGIF2-C20orf24A0A0A6YYL0 155 aa5.86□□□□□ -1.47
TRIO-220ENST00000512979 NPYP01303 97 aa5.86□□□□□ -1.47
TRIO-220ENST00000512979 G0S2P27469 103 aa5.86□□□□□ -1.47
TRIO-220ENST00000512979 Q6ZN92 141 aa5.86□□□□□ -1.47
TRIO-220ENST00000512979 Q6ZUT4 128 aa5.86□□□□□ -1.47
TRIO-220ENST00000512979 LITAFQ99732 161 aa5.86□□□□□ -1.47
TRIO-220ENST00000512979 LAMTOR2Q9Y2Q5 125 aa5.86□□□□□ -1.47
TRIO-220ENST00000512979 LOC389332A0A1B0GUA5 103 aa5.85□□□□□ -1.47
TRIO-220ENST00000512979 A0A1B0GXF2 115 aa5.85□□□□□ -1.47
TRIO-220ENST00000512979 RPL39P62891 51 aaKnown RBP5.85□□□□□ -1.47
TRIO-220ENST00000512979 MRPS36P82909 103 aaKnown RBP5.85□□□□□ -1.47
TRIO-220ENST00000512979 RPL18AQ02543 176 aaKnown RBP5.85□□□□□ -1.47
TRIO-220ENST00000512979 SPAG11BQ08648 103 aa5.85□□□□□ -1.47
TRIO-220ENST00000512979 OR10D4PQ8NGN7 298 aa5.85□□□□□ -1.47
TRIO-220ENST00000512979 LINC01600Q96MT4 127 aa5.85□□□□□ -1.47
TRIO-220ENST00000512979 C2orf88Q9BSF0 95 aa5.85□□□□□ -1.47
TRIO-220ENST00000512979 SPINK6Q6UWN8 80 aa5.84□□□□□ -1.47
TRIO-220ENST00000512979 ORAOV1Q8WV07 137 aa5.84□□□□□ -1.47
TRIO-220ENST00000512979 IMMP2LQ96T52 175 aa5.84□□□□□ -1.47
TRIO-220ENST00000512979 S100PP25815 95 aa5.83□□□□□ -1.48
TRIO-220ENST00000512979 NDUFV3P56181 108 aaKnown RBP5.83□□□□□ -1.48
TRIO-220ENST00000512979 ORMDL2Q53FV1 153 aa5.83□□□□□ -1.48
TRIO-220ENST00000512979 REG3GQ6UW15 175 aa5.83□□□□□ -1.48
TRIO-220ENST00000512979 TEX43Q6ZNM6 134 aa5.83□□□□□ -1.48
TRIO-220ENST00000512979 TMEM141Q96I45 108 aa5.83□□□□□ -1.48
TRIO-220ENST00000512979 CYSLTR1Q9Y271 337 aa5.83□□□□□ -1.48
TRIO-220ENST00000512979 A0A0J9YXV3 536 aa5.82□□□□□ -1.48
TRIO-220ENST00000512979 A0A1W2PNN7 141 aa5.82□□□□□ -1.48
TRIO-220ENST00000512979 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.82□□□□□ -1.48
TRIO-220ENST00000512979 NDUFA1O15239 70 aa5.82□□□□□ -1.48
TRIO-220ENST00000512979 UQCC3Q6UW78 93 aa5.82□□□□□ -1.48
TRIO-220ENST00000512979 NXT2Q9NPJ8 142 aaKnown RBP5.82□□□□□ -1.48
TRIO-220ENST00000512979 K7EMI3 77 aa5.81□□□□□ -1.48
TRIO-220ENST00000512979 C9orf116Q5BN46 136 aaPredicted RBP5.81□□□□□ -1.48
TRIO-220ENST00000512979 CLLU1Q5K131 121 aa5.81□□□□□ -1.48
TRIO-220ENST00000512979 Q8N8P6 123 aa5.81□□□□□ -1.48
TRIO-220ENST00000512979 OPRPNQ99935 248 aaPredicted RBP5.81□□□□□ -1.48
TRIO-220ENST00000512979 MT-ND6P03923 174 aa5.8□□□□□ -1.48
TRIO-220ENST00000512979 CFC1BP0CG36 223 aa5.8□□□□□ -1.48
TRIO-220ENST00000512979 CFC1P0CG37 223 aa5.8□□□□□ -1.48
TRIO-220ENST00000512979 SEC11AP67812 179 aa5.8□□□□□ -1.48
TRIO-220ENST00000512979 FAM104AQ969W3 186 aa5.8□□□□□ -1.48
TRIO-220ENST00000512979 PACRGQ96M98 296 aaPredicted RBP5.8□□□□□ -1.48
TRIO-220ENST00000512979 LRP2P98164 4655 aa5.79□□□□□ -1.48
TRIO-220ENST00000512979 IGLV7-46A0A075B6I9 117 aa5.79□□□□□ -1.48
TRIO-220ENST00000512979 IGHV3OR16-9A0A0B4J2B5 98 aa5.79□□□□□ -1.48
TRIO-220ENST00000512979 KRTAP10-8P60410 259 aa5.79□□□□□ -1.48
TRIO-220ENST00000512979 CKS1BP61024 79 aa5.79□□□□□ -1.48
TRIO-220ENST00000512979 LINC00242Q5T6M2 205 aa5.79□□□□□ -1.48
TRIO-220ENST00000512979 C2orf66Q6UXQ4 117 aa5.79□□□□□ -1.48
TRIO-220ENST00000512979 PHF5AQ7RTV0 110 aaKnown RBP5.79□□□□□ -1.48
TRIO-220ENST00000512979 MRPL35Q9NZE8 188 aaKnown RBP5.79□□□□□ -1.48
TRIO-220ENST00000512979 PSORS1C2Q9UIG4 136 aa5.79□□□□□ -1.48
TRIO-220ENST00000512979 IGLV4-3A0A075B6K6 122 aa5.78□□□□□ -1.48
TRIO-220ENST00000512979 TRAV9-1A0A075B6T8 112 aa5.78□□□□□ -1.48
TRIO-220ENST00000512979 TMEM218A2RU14 115 aa5.78□□□□□ -1.48
TRIO-220ENST00000512979 C6orf226Q5I0X4 101 aa5.78□□□□□ -1.48
TRIO-220ENST00000512979 GEMIN7Q9H840 131 aaKnown RBP5.78□□□□□ -1.48
TRIO-220ENST00000512979 LINC01549A6NIU2 74 aa5.77□□□□□ -1.49
TRIO-220ENST00000512979 H0Y8G0 127 aa5.77□□□□□ -1.49
TRIO-220ENST00000512979 COX19Q49B96 90 aa5.77□□□□□ -1.49
TRIO-220ENST00000512979 C1orf137Q5JT78 98 aa5.77□□□□□ -1.49
TRIO-220ENST00000512979 Q8NBF4 154 aa5.77□□□□□ -1.49
TRIO-220ENST00000512979 SCGB3A1Q96QR1 104 aa5.77□□□□□ -1.49
TRIO-220ENST00000512979 OCR1Q9BZK8 76 aa5.77□□□□□ -1.49
TRIO-220ENST00000512979 TOMM7Q9P0U1 55 aa5.77□□□□□ -1.49
TRIO-220ENST00000512979 TRBV30A0A0K0K1B3 111 aa5.76□□□□□ -1.49
TRIO-220ENST00000512979 HERVK_113P63121 156 aa5.76□□□□□ -1.49
TRIO-220ENST00000512979 UNQ6190/PRO20217Q6UXQ8 127 aa5.76□□□□□ -1.49
TRIO-220ENST00000512979 LINC01561Q8N1V8 128 aa5.76□□□□□ -1.49
TRIO-220ENST00000512979 SEC11CQ9BY50 192 aa5.76□□□□□ -1.49
TRIO-220ENST00000512979 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
TRIO-220ENST00000512979 SMCO4Q9NRQ5 59 aa5.76□□□□□ -1.49
TRIO-220ENST00000512979 C6orf48Q9UBA6 75 aa5.76□□□□□ -1.49
TRIO-220ENST00000512979 FAM168BA1KXE4 195 aa5.75□□□□□ -1.49
TRIO-220ENST00000512979 TLX1NBP0CAT3 122 aa5.75□□□□□ -1.49
TRIO-220ENST00000512979 UBE2D1P51668 147 aa5.75□□□□□ -1.49
TRIO-220ENST00000512979 UBE2BP63146 152 aa5.75□□□□□ -1.49
TRIO-220ENST00000512979 FA2HQ7L5A8 372 aa5.75□□□□□ -1.49
TRIO-220ENST00000512979 FAM19A5Q7Z5A7 132 aaPredicted RBP5.75□□□□□ -1.49
TRIO-220ENST00000512979 GNB1LQ9BYB4 327 aa5.75□□□□□ -1.49
TRIO-220ENST00000512979 FABP9Q0Z7S8 132 aa5.74□□□□□ -1.49
TRIO-220ENST00000512979 KIAA0087Q14695 138 aa5.74□□□□□ -1.49
TRIO-220ENST00000512979 COMMD7Q86VX2 200 aa5.74□□□□□ -1.49
TRIO-220ENST00000512979 TOMM6Q96B49 74 aa5.74□□□□□ -1.49
TRIO-220ENST00000512979 AMELXQ99217 191 aa5.74□□□□□ -1.49
TRIO-220ENST00000512979 TIMM17AQ99595 171 aa5.74□□□□□ -1.49
TRIO-220ENST00000512979 RPS10P5Q9NQ39 176 aa5.74□□□□□ -1.49
TRIO-220ENST00000512979 IGIPA6NJ69 53 aa5.73□□□□□ -1.49
TRIO-220ENST00000512979 PCP4L1A6NKN8 68 aa5.73□□□□□ -1.49
TRIO-220ENST00000512979 NDUFC2-KCTD14E9PQ53 114 aa5.73□□□□□ -1.49
TRIO-220ENST00000512979 IGLV7-43P04211 117 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms