RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 HIST1H2BCP62807 126 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 RPL18AQ02543 176 aaKnown RBP4.12□□□□□ -1.75
KDM3B-208ENST00000512928 HIST2H2BEQ16778 126 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.12□□□□□ -1.75
KDM3B-208ENST00000512928 C2orf66Q6UXQ4 117 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 TEX43Q6ZNM6 134 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 Q6ZRU5 148 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 HIST1H2BHQ93079 126 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 CHCHD1Q96BP2 118 aaKnown RBP4.12□□□□□ -1.75
KDM3B-208ENST00000512928 TMEM141Q96I45 108 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 HIST1H2BNQ99877 126 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 HIST1H2BMQ99879 126 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 C2orf88Q9BSF0 95 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 VCX2Q9H322 139 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 PLAC8Q9NZF1 115 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 LINC00474Q9P2X8 69 aa4.12□□□□□ -1.75
KDM3B-208ENST00000512928 LINC00614P0C842 121 aa4.11□□□□□ -1.75
KDM3B-208ENST00000512928 HNRNPA3P51991 378 aaKnown RBP4.11□□□□□ -1.75
KDM3B-208ENST00000512928 OR10D4PQ8NGN7 298 aa4.11□□□□□ -1.75
KDM3B-208ENST00000512928 IGLV5-45A0A087WSX0 123 aa4.1□□□□□ -1.75
KDM3B-208ENST00000512928 IGHV3OR16-9A0A0B4J2B5 98 aa4.1□□□□□ -1.75
KDM3B-208ENST00000512928 KRTAP29-1A8MX34 341 aaPredicted RBP4.1□□□□□ -1.75
KDM3B-208ENST00000512928 NDUFA1O15239 70 aa4.1□□□□□ -1.75
KDM3B-208ENST00000512928 G0S2P27469 103 aa4.1□□□□□ -1.75
KDM3B-208ENST00000512928 PTTG1IPP53801 180 aa4.1□□□□□ -1.75
KDM3B-208ENST00000512928 ZC2HC1BQ5TFG8 222 aa4.1□□□□□ -1.75
KDM3B-208ENST00000512928 ERASQ7Z444 233 aa4.1□□□□□ -1.75
KDM3B-208ENST00000512928 C2orf48Q96LS8 159 aa4.1□□□□□ -1.75
KDM3B-208ENST00000512928 C12orf57Q99622 126 aa4.1□□□□□ -1.75
KDM3B-208ENST00000512928 PKHD1L1Q86WI1 4243 aa4.1□□□□□ -1.75
KDM3B-208ENST00000512928 LRP1Q07954 4544 aaKnown RBP4.1□□□□□ -1.75
KDM3B-208ENST00000512928 HMCN2Q8NDA2 5059 aa4.1□□□□□ -1.75
KDM3B-208ENST00000512928 NUPR1O60356 82 aa4.09□□□□□ -1.75
KDM3B-208ENST00000512928 SERF1AO75920 110 aa4.09□□□□□ -1.75
KDM3B-208ENST00000512928 OXTP01178 125 aa4.09□□□□□ -1.75
KDM3B-208ENST00000512928 HBDP02042 147 aa4.09□□□□□ -1.75
KDM3B-208ENST00000512928 SMIM6P0DI80 62 aa4.09□□□□□ -1.75
KDM3B-208ENST00000512928 S100A2P29034 98 aa4.09□□□□□ -1.75
KDM3B-208ENST00000512928 UBE2D1P51668 147 aa4.09□□□□□ -1.75
KDM3B-208ENST00000512928 PRR3P79522 188 aaKnown RBP4.09□□□□□ -1.75
KDM3B-208ENST00000512928 LINC00242Q5T6M2 205 aa4.09□□□□□ -1.75
KDM3B-208ENST00000512928 FA2HQ7L5A8 372 aa4.09□□□□□ -1.75
KDM3B-208ENST00000512928 PACRGQ96M98 296 aaPredicted RBP4.09□□□□□ -1.75
KDM3B-208ENST00000512928 TOMM7Q9P0U1 55 aa4.09□□□□□ -1.75
KDM3B-208ENST00000512928 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.75
KDM3B-208ENST00000512928 A0A087WZ39 114 aa4.08□□□□□ -1.76
KDM3B-208ENST00000512928 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.08□□□□□ -1.76
KDM3B-208ENST00000512928 PRSS2P07478 247 aa4.08□□□□□ -1.76
KDM3B-208ENST00000512928 GAGE2EQ4V326 116 aa4.08□□□□□ -1.76
KDM3B-208ENST00000512928 PAPPA-AS1Q5QFB9 102 aa4.08□□□□□ -1.76
KDM3B-208ENST00000512928 C10orf25Q5T742 122 aa4.08□□□□□ -1.76
KDM3B-208ENST00000512928 UNQ6190/PRO20217Q6UXQ8 127 aa4.08□□□□□ -1.76
KDM3B-208ENST00000512928 LINC01561Q8N1V8 128 aa4.08□□□□□ -1.76
KDM3B-208ENST00000512928 SCGB3A1Q96QR1 104 aa4.08□□□□□ -1.76
KDM3B-208ENST00000512928 GEMIN7Q9H840 131 aaKnown RBP4.08□□□□□ -1.76
KDM3B-208ENST00000512928 GAGE2DQ9UEU5 116 aa4.08□□□□□ -1.76
KDM3B-208ENST00000512928 A0A1W2PNN7 141 aa4.07□□□□□ -1.76
KDM3B-208ENST00000512928 IGLC3P0DOY3 106 aa4.07□□□□□ -1.76
KDM3B-208ENST00000512928 NDUFA6P56556 154 aa4.07□□□□□ -1.76
KDM3B-208ENST00000512928 CKS1BP61024 79 aa4.07□□□□□ -1.76
KDM3B-208ENST00000512928 C9orf116Q5BN46 136 aaPredicted RBP4.07□□□□□ -1.76
KDM3B-208ENST00000512928 C2orf82Q6UX34 121 aa4.07□□□□□ -1.76
KDM3B-208ENST00000512928 CST9LQ9H4G1 147 aa4.07□□□□□ -1.76
KDM3B-208ENST00000512928 MRPL35Q9NZE8 188 aaKnown RBP4.07□□□□□ -1.76
KDM3B-208ENST00000512928 C6orf48Q9UBA6 75 aa4.07□□□□□ -1.76
KDM3B-208ENST00000512928 TRAV12-1A0A0B4J245 112 aa4.06□□□□□ -1.76
KDM3B-208ENST00000512928 TINCRA0A1B0GVN0 87 aa4.06□□□□□ -1.76
KDM3B-208ENST00000512928 LINC00587B1AMM8 73 aa4.06□□□□□ -1.76
KDM3B-208ENST00000512928 F8WDY8 70 aa4.06□□□□□ -1.76
KDM3B-208ENST00000512928 HERVK_113P63121 156 aa4.06□□□□□ -1.76
KDM3B-208ENST00000512928 SEC11AP67812 179 aa4.06□□□□□ -1.76
KDM3B-208ENST00000512928 PMCHL1Q16048 86 aa4.06□□□□□ -1.76
KDM3B-208ENST00000512928 RNF151Q2KHN1 245 aa4.06□□□□□ -1.76
KDM3B-208ENST00000512928 C6orf226Q5I0X4 101 aa4.06□□□□□ -1.76
KDM3B-208ENST00000512928 Q6ZRP5 223 aa4.06□□□□□ -1.76
KDM3B-208ENST00000512928 FAM19A5Q7Z5A7 132 aaPredicted RBP4.06□□□□□ -1.76
KDM3B-208ENST00000512928 KRTAP4-8Q9BYQ9 185 aa4.06□□□□□ -1.76
KDM3B-208ENST00000512928 FAM168BA1KXE4 195 aa4.05□□□□□ -1.76
KDM3B-208ENST00000512928 ATP5LO75964 103 aa4.05□□□□□ -1.76
KDM3B-208ENST00000512928 AKR1D1P51857 326 aa4.05□□□□□ -1.76
KDM3B-208ENST00000512928 KIAA0087Q14695 138 aa4.05□□□□□ -1.76
KDM3B-208ENST00000512928 PMVKQ15126 192 aa4.05□□□□□ -1.76
KDM3B-208ENST00000512928 PHF5AQ7RTV0 110 aaKnown RBP4.05□□□□□ -1.76
KDM3B-208ENST00000512928 BAGE3Q86Y29 109 aa4.05□□□□□ -1.76
KDM3B-208ENST00000512928 IFI27L1Q96BM0 104 aa4.05□□□□□ -1.76
KDM3B-208ENST00000512928 CDKN2A-AS1Q9UH64 79 aa4.05□□□□□ -1.76
KDM3B-208ENST00000512928 IGLV5-39A0A0G2JS06 123 aa4.04□□□□□ -1.76
KDM3B-208ENST00000512928 TRBV30A0A0K0K1B3 111 aa4.04□□□□□ -1.76
KDM3B-208ENST00000512928 NDUFC2-KCTD14E9PQ53 114 aa4.04□□□□□ -1.76
KDM3B-208ENST00000512928 HSBP1O75506 76 aa4.04□□□□□ -1.76
KDM3B-208ENST00000512928 GHRHP01286 108 aa4.04□□□□□ -1.76
KDM3B-208ENST00000512928 SNRPEP62304 92 aaKnown RBP4.04□□□□□ -1.76
KDM3B-208ENST00000512928 UBE2BP63146 152 aa4.04□□□□□ -1.76
KDM3B-208ENST00000512928 C1orf137Q5JT78 98 aa4.04□□□□□ -1.76
KDM3B-208ENST00000512928 SERTAD4-AS1Q5TG53 156 aa4.04□□□□□ -1.76
KDM3B-208ENST00000512928 FAM19A2Q8N3H0 131 aa4.04□□□□□ -1.76
KDM3B-208ENST00000512928 C5orf52A6NGY3 159 aa4.03□□□□□ -1.76
KDM3B-208ENST00000512928 TMEM238C9JI98 176 aa4.03□□□□□ -1.76
KDM3B-208ENST00000512928 M0QXV9 152 aa4.03□□□□□ -1.76
KDM3B-208ENST00000512928 SPINK8P0C7L1 97 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms