RNA–Protein interactions for RNA: ENST00000512517.1

LINC01258-201, Transcript of long intergenic non-protein coding RNA 1258, humanhuman

TSL 2 BASIC

Gene LINC01258, Length 2,059 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01258-201ENST00000512517 CD28P10747 220 aa6.36□□□□□ -1.39
LINC01258-201ENST00000512517 ZNF625Q96I27 306 aaPredicted RBP6.36□□□□□ -1.39
LINC01258-201ENST00000512517 RBM12B-AS1Q9P1G2 102 aa6.36□□□□□ -1.39
LINC01258-201ENST00000512517 TRBV7-4A0A0J9YYF1 115 aa6.35□□□□□ -1.39
LINC01258-201ENST00000512517 F8W735 103 aaPredicted RBP6.35□□□□□ -1.39
LINC01258-201ENST00000512517 IGHV3-11P01762 117 aa6.35□□□□□ -1.39
LINC01258-201ENST00000512517 CRPP02741 224 aa6.35□□□□□ -1.39
LINC01258-201ENST00000512517 C6orf223Q8N319 242 aa6.35□□□□□ -1.39
LINC01258-201ENST00000512517 WFDC9Q8NEX5 89 aa6.35□□□□□ -1.39
LINC01258-201ENST00000512517 NIPBLQ6KC79 2804 aaeCLIP6.35□□□□□ -1.39
LINC01258-201ENST00000512517 DNAJC9-AS1A6NH13 148 aa6.35□□□□□ -1.39
LINC01258-201ENST00000512517 LY6G6DO95868 133 aa6.35□□□□□ -1.39
LINC01258-201ENST00000512517 C19orf54Q5BKX5 351 aa6.35□□□□□ -1.39
LINC01258-201ENST00000512517 C9orf129Q5T035 196 aaKnown RBP6.35□□□□□ -1.39
LINC01258-201ENST00000512517 ORMDL1Q9P0S3 153 aa6.35□□□□□ -1.39
LINC01258-201ENST00000512517 NCR3O14931 201 aa6.34□□□□□ -1.39
LINC01258-201ENST00000512517 CTSGP08311 255 aa6.34□□□□□ -1.39
LINC01258-201ENST00000512517 RPL11P62913 178 aaKnown RBP6.34□□□□□ -1.39
LINC01258-201ENST00000512517 PRR9Q5T870 116 aa6.34□□□□□ -1.39
LINC01258-201ENST00000512517 C10orf99Q6UWK7 81 aa6.34□□□□□ -1.39
LINC01258-201ENST00000512517 ZNF702PQ9H963 129 aa6.34□□□□□ -1.39
LINC01258-201ENST00000512517 JMJD1CQ15652 2540 aa6.34□□□□□ -1.4
LINC01258-201ENST00000512517 F5H697 171 aa6.34□□□□□ -1.4
LINC01258-201ENST00000512517 RNASE3P12724 160 aaKnown RBP6.34□□□□□ -1.4
LINC01258-201ENST00000512517 FN1P02751 2386 aaKnown RBP6.33□□□□□ -1.4
LINC01258-201ENST00000512517 TEP1Q99973 2627 aaKnown RBP6.33□□□□□ -1.4
LINC01258-201ENST00000512517 HOXD3P31249 432 aaPredicted RBP6.33□□□□□ -1.4
LINC01258-201ENST00000512517 FUSP35637 526 aaKnown RBP eCLIP6.33□□□□□ -1.4
LINC01258-201ENST00000512517 ZFAND2AQ8N6M9 145 aa6.33□□□□□ -1.4
LINC01258-201ENST00000512517 ESM1Q9NQ30 184 aa6.33□□□□□ -1.4
LINC01258-201ENST00000512517 IGLV5-45A0A087WSX0 123 aa6.32□□□□□ -1.4
LINC01258-201ENST00000512517 A0A087WYN8 130 aa6.32□□□□□ -1.4
LINC01258-201ENST00000512517 H3BUA1 57 aa6.32□□□□□ -1.4
LINC01258-201ENST00000512517 NDUFS5O43920 106 aa6.32□□□□□ -1.4
LINC01258-201ENST00000512517 IGLV1-40P01703 118 aa6.32□□□□□ -1.4
LINC01258-201ENST00000512517 MIR7-3HGQ8N6C7 128 aa6.32□□□□□ -1.4
LINC01258-201ENST00000512517 USMG5Q96IX5 58 aa6.32□□□□□ -1.4
LINC01258-201ENST00000512517 INAFM1C9JVW0 142 aa6.32□□□□□ -1.4
LINC01258-201ENST00000512517 UBE2BP63146 152 aa6.32□□□□□ -1.4
LINC01258-201ENST00000512517 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.32□□□□□ -1.4
LINC01258-201ENST00000512517 TMEM254Q8TBM7 123 aa6.32□□□□□ -1.4
LINC01258-201ENST00000512517 C2CD3Q4AC94 2353 aa6.31□□□□□ -1.4
LINC01258-201ENST00000512517 IGHV3OR16-13A0A075B7E8 117 aa6.31□□□□□ -1.4
LINC01258-201ENST00000512517 IGHV3-74A0A0B4J1X5 117 aa6.31□□□□□ -1.4
LINC01258-201ENST00000512517 CXCL6P80162 114 aa6.31□□□□□ -1.4
LINC01258-201ENST00000512517 KLK9Q2XQG4 91 aa6.31□□□□□ -1.4
LINC01258-201ENST00000512517 KHDC1LQ5JSQ8 128 aa6.31□□□□□ -1.4
LINC01258-201ENST00000512517 KLK9Q9UKQ9 250 aa6.31□□□□□ -1.4
LINC01258-201ENST00000512517 IGHV3-49A0A0A0MS15 119 aa6.3□□□□□ -1.4
LINC01258-201ENST00000512517 IGLV5-39A0A0G2JS06 123 aa6.3□□□□□ -1.4
LINC01258-201ENST00000512517 M0QY20 66 aa6.3□□□□□ -1.4
LINC01258-201ENST00000512517 Q9H8V8 135 aa6.3□□□□□ -1.4
LINC01258-201ENST00000512517 TRAV10A0A0B4J240 114 aa6.3□□□□□ -1.4
LINC01258-201ENST00000512517 IGHV3-66A0A0C4DH42 116 aa6.3□□□□□ -1.4
LINC01258-201ENST00000512517 PRYO14603 147 aa6.3□□□□□ -1.4
LINC01258-201ENST00000512517 APOC4P55056 127 aa6.3□□□□□ -1.4
LINC01258-201ENST00000512517 UBE2E2Q96LR5 201 aa6.3□□□□□ -1.4
LINC01258-201ENST00000512517 LINC00167Q96N53 147 aa6.3□□□□□ -1.4
LINC01258-201ENST00000512517 IGKV2-29A2NJV5 120 aaPredicted RBP6.29□□□□□ -1.4
LINC01258-201ENST00000512517 LECT2O14960 151 aa6.29□□□□□ -1.4
LINC01258-201ENST00000512517 UNQ9165/PRO28630Q6UXU0 137 aa6.29□□□□□ -1.4
LINC01258-201ENST00000512517 Q6ZTC4 211 aa6.29□□□□□ -1.4
LINC01258-201ENST00000512517 Q6ZVQ6 151 aa6.29□□□□□ -1.4
LINC01258-201ENST00000512517 DEFB104AQ8WTQ1 72 aa6.29□□□□□ -1.4
LINC01258-201ENST00000512517 SORL1Q92673 2214 aa6.28□□□□□ -1.4
LINC01258-201ENST00000512517 A0A087WWL8 130 aa6.28□□□□□ -1.4
LINC01258-201ENST00000512517 GNRH2O43555 120 aa6.28□□□□□ -1.4
LINC01258-201ENST00000512517 RNASE1P07998 156 aaKnown RBP6.28□□□□□ -1.4
LINC01258-201ENST00000512517 NREPQ16612 68 aa6.28□□□□□ -1.4
LINC01258-201ENST00000512517 C11orf44Q8N8P7 122 aa6.28□□□□□ -1.4
LINC01258-201ENST00000512517 SMIM11BQ8TCY0 68 aa6.28□□□□□ -1.4
LINC01258-201ENST00000512517 FAM104AQ969W3 186 aa6.28□□□□□ -1.4
LINC01258-201ENST00000512517 LINC00588Q9Y4M8 146 aa6.28□□□□□ -1.4
LINC01258-201ENST00000512517 A0A087WZ39 114 aa6.27□□□□□ -1.41
LINC01258-201ENST00000512517 hDV103S1A0JD37 113 aa6.27□□□□□ -1.41
LINC01258-201ENST00000512517 CLPSL1A2RUU4 121 aa6.27□□□□□ -1.41
LINC01258-201ENST00000512517 LINC01547P58512 204 aaPredicted RBP6.27□□□□□ -1.41
LINC01258-201ENST00000512517 TMEM256-PLSCR3K7ERE1 68 aa6.27□□□□□ -1.41
LINC01258-201ENST00000512517 M0R378 163 aa6.27□□□□□ -1.41
LINC01258-201ENST00000512517 NDUFA4O00483 81 aa6.27□□□□□ -1.41
LINC01258-201ENST00000512517 DEFB136Q30KP8 78 aa6.27□□□□□ -1.41
LINC01258-201ENST00000512517 C11orf72Q8NBR9 251 aa6.27□□□□□ -1.41
LINC01258-201ENST00000512517 C11orf45Q8TAV5 145 aa6.27□□□□□ -1.41
LINC01258-201ENST00000512517 MAST4O15021 2626 aa6.26□□□□□ -1.41
LINC01258-201ENST00000512517 C18orf65Q6ZTR6 163 aa6.26□□□□□ -1.41
LINC01258-201ENST00000512517 CDKN2A-AS1Q9UH64 79 aa6.26□□□□□ -1.41
LINC01258-201ENST00000512517 RPL36AP83881 106 aaKnown RBP6.26□□□□□ -1.41
LINC01258-201ENST00000512517 Q6ZRP5 223 aa6.26□□□□□ -1.41
LINC01258-201ENST00000512517 LINC00337Q8N6G1 96 aa6.26□□□□□ -1.41
LINC01258-201ENST00000512517 RPL36ALQ969Q0 106 aaKnown RBP6.26□□□□□ -1.41
LINC01258-201ENST00000512517 ATRQ13535 2644 aa6.25□□□□□ -1.41
LINC01258-201ENST00000512517 UBE2L6O14933 153 aa6.25□□□□□ -1.41
LINC01258-201ENST00000512517 LINC01006Q8NI28 216 aa6.25□□□□□ -1.41
LINC01258-201ENST00000512517 IGKV3-7A0A075B6H7 116 aa6.24□□□□□ -1.41
LINC01258-201ENST00000512517 LOC110117498A0A087WWA1 95 aa6.24□□□□□ -1.41
LINC01258-201ENST00000512517 FAM74A4Q5TZK3 123 aa6.24□□□□□ -1.41
LINC01258-201ENST00000512517 Q8N3U1 123 aa6.24□□□□□ -1.41
LINC01258-201ENST00000512517 CD164L2Q6UWJ8 174 aa6.24□□□□□ -1.41
LINC01258-201ENST00000512517 FAM19A3Q7Z5A8 133 aa6.24□□□□□ -1.41
LINC01258-201ENST00000512517 SND1-IT1Q9HBX3 110 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms