RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 GAGE2BQ13066 116 aa6.39□□□□□ -1.39
CPNE4-210ENST00000512332 GAGE2EQ4V326 116 aa6.39□□□□□ -1.39
CPNE4-210ENST00000512332 GAGE2DQ9UEU5 116 aa6.39□□□□□ -1.39
CPNE4-210ENST00000512332 BAALC-AS2P0C853 105 aa6.38□□□□□ -1.39
CPNE4-210ENST00000512332 FAM218AQ96MZ4 157 aa6.38□□□□□ -1.39
CPNE4-210ENST00000512332 XCL1P47992 114 aa6.38□□□□□ -1.39
CPNE4-210ENST00000512332 C15orf53Q8NAA6 179 aa6.38□□□□□ -1.39
CPNE4-210ENST00000512332 FASNP49327 2511 aaKnown RBP6.37□□□□□ -1.39
CPNE4-210ENST00000512332 CD164L2Q6UWJ8 174 aa6.37□□□□□ -1.39
CPNE4-210ENST00000512332 SMIM11BQ8TCY0 68 aa6.37□□□□□ -1.39
CPNE4-210ENST00000512332 FN1P02751 2386 aaKnown RBP6.37□□□□□ -1.39
CPNE4-210ENST00000512332 MIFP14174 115 aa6.37□□□□□ -1.39
CPNE4-210ENST00000512332 PFN2P35080 140 aa6.37□□□□□ -1.39
CPNE4-210ENST00000512332 COX17Q14061 63 aa6.37□□□□□ -1.39
CPNE4-210ENST00000512332 C22orf24Q9Y442 160 aa6.37□□□□□ -1.39
CPNE4-210ENST00000512332 WIPF1O43516 503 aa6.36□□□□□ -1.39
CPNE4-210ENST00000512332 CXCL5P42830 114 aa6.36□□□□□ -1.39
CPNE4-210ENST00000512332 DEFB135Q30KP9 77 aa6.36□□□□□ -1.39
CPNE4-210ENST00000512332 SPATA3Q8NHX4 192 aa6.36□□□□□ -1.39
CPNE4-210ENST00000512332 IGHV4-28A0A0C4DH34 117 aa6.35□□□□□ -1.39
CPNE4-210ENST00000512332 INAFM2P0DMQ5 153 aa6.35□□□□□ -1.39
CPNE4-210ENST00000512332 KIAA0087Q14695 138 aa6.35□□□□□ -1.39
CPNE4-210ENST00000512332 WFDC9Q8NEX5 89 aa6.35□□□□□ -1.39
CPNE4-210ENST00000512332 INAFM1C9JVW0 142 aa6.35□□□□□ -1.39
CPNE4-210ENST00000512332 ATP5G1P05496 136 aa6.35□□□□□ -1.39
CPNE4-210ENST00000512332 MALP21145 153 aa6.35□□□□□ -1.39
CPNE4-210ENST00000512332 DAD1P61803 113 aa6.35□□□□□ -1.39
CPNE4-210ENST00000512332 SDIM1Q6ZPB5 146 aa6.35□□□□□ -1.39
CPNE4-210ENST00000512332 LINC00269Q8N2A0 174 aa6.35□□□□□ -1.39
CPNE4-210ENST00000512332 Q8NAQ8 132 aa6.35□□□□□ -1.39
CPNE4-210ENST00000512332 NDUFC2O95298 119 aa6.34□□□□□ -1.39
CPNE4-210ENST00000512332 A0A096LPF7 62 aa6.34□□□□□ -1.39
CPNE4-210ENST00000512332 TRBV7-7A0A0K0K1E9 115 aa6.34□□□□□ -1.39
CPNE4-210ENST00000512332 REG3AQ06141 175 aa6.34□□□□□ -1.39
CPNE4-210ENST00000512332 CHCHD10Q8WYQ3 142 aaPredicted RBP6.34□□□□□ -1.39
CPNE4-210ENST00000512332 ANAPC13Q9BS18 74 aa6.34□□□□□ -1.39
CPNE4-210ENST00000512332 DNAL4O96015 105 aa6.33□□□□□ -1.4
CPNE4-210ENST00000512332 SPART-AS1P0CW21 52 aa6.33□□□□□ -1.4
CPNE4-210ENST00000512332 NDUFV3P56181 108 aaKnown RBP6.33□□□□□ -1.4
CPNE4-210ENST00000512332 TTC32Q5I0X7 151 aa6.33□□□□□ -1.4
CPNE4-210ENST00000512332 MUC7Q8TAX7 377 aa6.33□□□□□ -1.4
CPNE4-210ENST00000512332 IMUPQ9GZP8 106 aa6.33□□□□□ -1.4
CPNE4-210ENST00000512332 A0A087WYN8 130 aa6.32□□□□□ -1.4
CPNE4-210ENST00000512332 ANGP03950 147 aaKnown RBP6.32□□□□□ -1.4
CPNE4-210ENST00000512332 NHLRC4P0CG21 123 aaPredicted RBP6.32□□□□□ -1.4
CPNE4-210ENST00000512332 LELP1Q5T871 98 aa6.32□□□□□ -1.4
CPNE4-210ENST00000512332 CFAP161Q6P656 301 aa6.32□□□□□ -1.4
CPNE4-210ENST00000512332 CLPSL2Q6UWE3 100 aa6.32□□□□□ -1.4
CPNE4-210ENST00000512332 OBSCN-AS1Q96MR7 158 aa6.32□□□□□ -1.4
CPNE4-210ENST00000512332 Q9HAA7 133 aa6.32□□□□□ -1.4
CPNE4-210ENST00000512332 GCN1Q92616 2671 aaKnown RBP6.32□□□□□ -1.4
CPNE4-210ENST00000512332 A0A1B0GX51 115 aa6.31□□□□□ -1.4
CPNE4-210ENST00000512332 DEFB4AO15263 64 aa6.31□□□□□ -1.4
CPNE4-210ENST00000512332 LINC00643Q86TS7 51 aa6.31□□□□□ -1.4
CPNE4-210ENST00000512332 OR13C6PQ8NH95 151 aa6.31□□□□□ -1.4
CPNE4-210ENST00000512332 KLK5Q9Y337 293 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-210ENST00000512332 C11orf68Q9H3H3 251 aaKnown RBP6.31□□□□□ -1.4
CPNE4-210ENST00000512332 CELA1Q9UNI1 258 aa6.31□□□□□ -1.4
CPNE4-210ENST00000512332 NOTCH2Q04721 2471 aa6.31□□□□□ -1.4
CPNE4-210ENST00000512332 PRR34Q9NV39 138 aa6.3□□□□□ -1.4
CPNE4-210ENST00000512332 NSD1Q96L73 2696 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-210ENST00000512332 NBEAL2Q6ZNJ1 2754 aa6.3□□□□□ -1.4
CPNE4-210ENST00000512332 TMEM126AQ9H061 195 aa6.3□□□□□ -1.4
CPNE4-210ENST00000512332 VWFP04275 2813 aa6.3□□□□□ -1.4
CPNE4-210ENST00000512332 LECT2O14960 151 aa6.29□□□□□ -1.4
CPNE4-210ENST00000512332 IGHV4-30-4P0DP06 118 aa6.29□□□□□ -1.4
CPNE4-210ENST00000512332 NANOS2P60321 138 aaKnown RBP6.29□□□□□ -1.4
CPNE4-210ENST00000512332 LINC00167Q96N53 147 aa6.29□□□□□ -1.4
CPNE4-210ENST00000512332 OTOGQ6ZRI0 2925 aa6.29□□□□□ -1.4
CPNE4-210ENST00000512332 A0A0J9YWU9 116 aa6.29□□□□□ -1.4
CPNE4-210ENST00000512332 IGLV10-54A0A075B6I4 117 aa6.28□□□□□ -1.4
CPNE4-210ENST00000512332 Q8N3U1 123 aa6.28□□□□□ -1.4
CPNE4-210ENST00000512332 SMCR5Q8TEV8 140 aa6.28□□□□□ -1.4
CPNE4-210ENST00000512332 H3BNG1 76 aa6.27□□□□□ -1.4
CPNE4-210ENST00000512332 ORMDL1Q9P0S3 153 aa6.27□□□□□ -1.4
CPNE4-210ENST00000512332 HECTD1Q9ULT8 2610 aa6.27□□□□□ -1.41
CPNE4-210ENST00000512332 OXLD1Q5BKU9 147 aa6.27□□□□□ -1.41
CPNE4-210ENST00000512332 GVQW2A0A096LPI5 108 aaPredicted RBP6.26□□□□□ -1.41
CPNE4-210ENST00000512332 GAGE2AQ6NT46 116 aa6.26□□□□□ -1.41
CPNE4-210ENST00000512332 Q8N814 137 aa6.26□□□□□ -1.41
CPNE4-210ENST00000512332 LYPD5Q6UWN5 251 aa6.26□□□□□ -1.41
CPNE4-210ENST00000512332 PRR3P79522 188 aaKnown RBP6.25□□□□□ -1.41
CPNE4-210ENST00000512332 SPAG11BQ08648 103 aa6.25□□□□□ -1.41
CPNE4-210ENST00000512332 ENHOQ6UWT2 76 aa6.25□□□□□ -1.41
CPNE4-210ENST00000512332 CYSRT1A8MQ03 144 aa6.25□□□□□ -1.41
CPNE4-210ENST00000512332 HTN3P15516 51 aa6.25□□□□□ -1.41
CPNE4-210ENST00000512332 C9orf116Q5BN46 136 aaPredicted RBP6.25□□□□□ -1.41
CPNE4-210ENST00000512332 C9orf129Q5T035 196 aaKnown RBP6.25□□□□□ -1.41
CPNE4-210ENST00000512332 KLK12Q9UKR0 248 aa6.25□□□□□ -1.41
CPNE4-210ENST00000512332 TENM1Q9UKZ4 2725 aa6.24□□□□□ -1.41
CPNE4-210ENST00000512332 JMJD7-PLA2G4BH0Y9G9 81 aa6.24□□□□□ -1.41
CPNE4-210ENST00000512332 TMEM256-PLSCR3K7ERE1 68 aa6.24□□□□□ -1.41
CPNE4-210ENST00000512332 UNQ6190/PRO20217Q6UXQ8 127 aa6.24□□□□□ -1.41
CPNE4-210ENST00000512332 C14orf132Q9NPU4 83 aa6.24□□□□□ -1.41
CPNE4-210ENST00000512332 C10orf25Q5T742 122 aa6.23□□□□□ -1.41
CPNE4-210ENST00000512332 TEP1Q99973 2627 aaKnown RBP6.23□□□□□ -1.41
CPNE4-210ENST00000512332 SLPIP03973 132 aa6.23□□□□□ -1.41
CPNE4-210ENST00000512332 SVIPQ8NHG7 77 aa6.23□□□□□ -1.41
CPNE4-210ENST00000512332 ATRQ13535 2644 aa6.23□□□□□ -1.41
CPNE4-210ENST00000512332 S100A7L2Q5SY68 101 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms