RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 ORAOV1Q8WV07 137 aa3.91□□□□□ -1.78
NR1I3-229ENST00000511748 KIR2DL4Q99706 377 aa3.91□□□□□ -1.78
NR1I3-229ENST00000511748 TMEM242Q9NWH2 141 aa3.91□□□□□ -1.78
NR1I3-229ENST00000511748 TRAV13-1A0A0B4J241 112 aa3.9□□□□□ -1.79
NR1I3-229ENST00000511748 FAM168BA1KXE4 195 aa3.9□□□□□ -1.79
NR1I3-229ENST00000511748 NDUFC2-KCTD14E9PQ53 114 aa3.9□□□□□ -1.79
NR1I3-229ENST00000511748 PPP1R2P9O14990 202 aa3.9□□□□□ -1.79
NR1I3-229ENST00000511748 POLR2KP53803 58 aaKnown RBP3.9□□□□□ -1.79
NR1I3-229ENST00000511748 ZNF345Q14585 488 aa3.9□□□□□ -1.79
NR1I3-229ENST00000511748 FAM229BQ4G0N7 80 aa3.9□□□□□ -1.79
NR1I3-229ENST00000511748 C5orf38Q86SI9 138 aa3.9□□□□□ -1.79
NR1I3-229ENST00000511748 ALKBH7Q9BT30 221 aaPredicted RBP3.9□□□□□ -1.79
NR1I3-229ENST00000511748 TP73-AS1Q9UF72 201 aa3.9□□□□□ -1.79
NR1I3-229ENST00000511748 UBE2D4Q9Y2X8 147 aa3.9□□□□□ -1.79
NR1I3-229ENST00000511748 IGHV3OR16-9A0A0B4J2B5 98 aa3.89□□□□□ -1.79
NR1I3-229ENST00000511748 A8MWL6 223 aa3.89□□□□□ -1.79
NR1I3-229ENST00000511748 ARPC5O15511 151 aa3.89□□□□□ -1.79
NR1I3-229ENST00000511748 LINC00173Q6ZV60 143 aa3.89□□□□□ -1.79
NR1I3-229ENST00000511748 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
NR1I3-229ENST00000511748 LINC00304Q8N9R0 145 aa3.89□□□□□ -1.79
NR1I3-229ENST00000511748 PACRGQ96M98 296 aaPredicted RBP3.89□□□□□ -1.79
NR1I3-229ENST00000511748 GNG13Q9P2W3 67 aa3.89□□□□□ -1.79
NR1I3-229ENST00000511748 TGIF2-C20orf24A0A0A6YYL0 155 aa3.88□□□□□ -1.79
NR1I3-229ENST00000511748 BCE1O60756 84 aa3.88□□□□□ -1.79
NR1I3-229ENST00000511748 FOXA3P55318 350 aaPredicted RBP3.88□□□□□ -1.79
NR1I3-229ENST00000511748 Q5BKY6 102 aa3.88□□□□□ -1.79
NR1I3-229ENST00000511748 KRTAP11-1Q8IUC1 163 aa3.88□□□□□ -1.79
NR1I3-229ENST00000511748 TMEM191AQ9H0A3 160 aa3.88□□□□□ -1.79
NR1I3-229ENST00000511748 MED9Q9NWA0 146 aa3.88□□□□□ -1.79
NR1I3-229ENST00000511748 C6orf48Q9UBA6 75 aa3.88□□□□□ -1.79
NR1I3-229ENST00000511748 MUC17Q685J3 4493 aa3.88□□□□□ -1.79
NR1I3-229ENST00000511748 A0A1B0GV50 99 aa3.87□□□□□ -1.79
NR1I3-229ENST00000511748 KANTRA0A1W2PQU2 76 aa3.87□□□□□ -1.79
NR1I3-229ENST00000511748 HBBP68871 147 aa3.87□□□□□ -1.79
NR1I3-229ENST00000511748 MRPS36P82909 103 aaKnown RBP3.87□□□□□ -1.79
NR1I3-229ENST00000511748 ASB16-AS1Q495Z4 193 aa3.87□□□□□ -1.79
NR1I3-229ENST00000511748 SPAG11AQ6PDA7 123 aa3.87□□□□□ -1.79
NR1I3-229ENST00000511748 UNQ6190/PRO20217Q6UXQ8 127 aa3.87□□□□□ -1.79
NR1I3-229ENST00000511748 LINC01561Q8N1V8 128 aa3.87□□□□□ -1.79
NR1I3-229ENST00000511748 LINC00337Q8N6G1 96 aa3.87□□□□□ -1.79
NR1I3-229ENST00000511748 RNASE7Q9H1E1 156 aaKnown RBP3.87□□□□□ -1.79
NR1I3-229ENST00000511748 SPANXA1Q9NS26 97 aa3.87□□□□□ -1.79
NR1I3-229ENST00000511748 TRBV20OR9-2A0A075B6H5 130 aa3.86□□□□□ -1.79
NR1I3-229ENST00000511748 IGKV2D-26A0A0A0MRZ7 120 aa3.86□□□□□ -1.79
NR1I3-229ENST00000511748 A0A1B0GUT8 65 aa3.86□□□□□ -1.79
NR1I3-229ENST00000511748 RPL32P62910 135 aaKnown RBP3.86□□□□□ -1.79
NR1I3-229ENST00000511748 Q6ZUT4 128 aa3.86□□□□□ -1.79
NR1I3-229ENST00000511748 FAM231DQ6ZW35 169 aa3.86□□□□□ -1.79
NR1I3-229ENST00000511748 C20orf78Q9BR46 151 aa3.86□□□□□ -1.79
NR1I3-229ENST00000511748 PPDPFQ9H3Y8 114 aa3.86□□□□□ -1.79
NR1I3-229ENST00000511748 LINC00862A6NCI5 91 aa3.85□□□□□ -1.79
NR1I3-229ENST00000511748 GATCO43716 136 aaKnown RBP3.85□□□□□ -1.79
NR1I3-229ENST00000511748 S100A1P23297 94 aa3.85□□□□□ -1.79
NR1I3-229ENST00000511748 C9orf129Q5T035 196 aaKnown RBP3.85□□□□□ -1.79
NR1I3-229ENST00000511748 LINC00242Q5T6M2 205 aa3.85□□□□□ -1.79
NR1I3-229ENST00000511748 MRPL55Q7Z7F7 128 aaKnown RBP3.85□□□□□ -1.79
NR1I3-229ENST00000511748 AKAP14Q86UN6 197 aa3.85□□□□□ -1.79
NR1I3-229ENST00000511748 C22orf24Q9Y442 160 aa3.85□□□□□ -1.79
NR1I3-229ENST00000511748 HMSDA8MTL9 139 aa3.84□□□□□ -1.79
NR1I3-229ENST00000511748 ZNF727A8MUV8 499 aa3.84□□□□□ -1.79
NR1I3-229ENST00000511748 RAB4AP20338 218 aa3.84□□□□□ -1.79
NR1I3-229ENST00000511748 CKS1BP61024 79 aa3.84□□□□□ -1.79
NR1I3-229ENST00000511748 KIAA0087Q14695 138 aa3.84□□□□□ -1.79
NR1I3-229ENST00000511748 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.79
NR1I3-229ENST00000511748 RETNLBQ9BQ08 111 aa3.84□□□□□ -1.79
NR1I3-229ENST00000511748 IGLV4-3A0A075B6K6 122 aa3.83□□□□□ -1.8
NR1I3-229ENST00000511748 TRBV24-1A0A075B6N3 115 aa3.83□□□□□ -1.8
NR1I3-229ENST00000511748 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
NR1I3-229ENST00000511748 IFI27P40305 119 aaPredicted RBP3.83□□□□□ -1.8
NR1I3-229ENST00000511748 UBE2AP49459 152 aa3.83□□□□□ -1.8
NR1I3-229ENST00000511748 RIGQ13278 110 aa3.83□□□□□ -1.8
NR1I3-229ENST00000511748 Q6ZVQ6 151 aa3.83□□□□□ -1.8
NR1I3-229ENST00000511748 A0A1B0GW15 77 aa3.82□□□□□ -1.8
NR1I3-229ENST00000511748 HIGD1CA8MV81 97 aa3.82□□□□□ -1.8
NR1I3-229ENST00000511748 TMEM250H0YL14 139 aa3.82□□□□□ -1.8
NR1I3-229ENST00000511748 K7EN84 100 aa3.82□□□□□ -1.8
NR1I3-229ENST00000511748 CXCL5P42830 114 aa3.82□□□□□ -1.8
NR1I3-229ENST00000511748 NDUFV3P56181 108 aaKnown RBP3.82□□□□□ -1.8
NR1I3-229ENST00000511748 NDUFA5Q16718 116 aa3.82□□□□□ -1.8
NR1I3-229ENST00000511748 KRTAP13-2Q52LG2 175 aa3.82□□□□□ -1.8
NR1I3-229ENST00000511748 AMN1Q8IY45 258 aa3.82□□□□□ -1.8
NR1I3-229ENST00000511748 C2orf88Q9BSF0 95 aa3.82□□□□□ -1.8
NR1I3-229ENST00000511748 NDUFA12Q9UI09 145 aa3.82□□□□□ -1.8
NR1I3-229ENST00000511748 SEC11AP67812 179 aa3.81□□□□□ -1.8
NR1I3-229ENST00000511748 C6orf226Q5I0X4 101 aa3.81□□□□□ -1.8
NR1I3-229ENST00000511748 Q6ZN92 141 aa3.81□□□□□ -1.8
NR1I3-229ENST00000511748 Q8IZM0 81 aa3.81□□□□□ -1.8
NR1I3-229ENST00000511748 FAM19A2Q8N3H0 131 aa3.81□□□□□ -1.8
NR1I3-229ENST00000511748 GNB1LQ9BYB4 327 aa3.81□□□□□ -1.8
NR1I3-229ENST00000511748 F8VRH5 84 aa3.8□□□□□ -1.8
NR1I3-229ENST00000511748 SMLR1H3BR10 107 aa3.8□□□□□ -1.8
NR1I3-229ENST00000511748 PPBPP02775 128 aa3.8□□□□□ -1.8
NR1I3-229ENST00000511748 S100A8P05109 93 aa3.8□□□□□ -1.8
NR1I3-229ENST00000511748 RAB5AP20339 215 aa3.8□□□□□ -1.8
NR1I3-229ENST00000511748 KRTAP13-3Q3SY46 172 aa3.8□□□□□ -1.8
NR1I3-229ENST00000511748 C2orf82Q6UX34 121 aa3.8□□□□□ -1.8
NR1I3-229ENST00000511748 TEX43Q6ZNM6 134 aa3.8□□□□□ -1.8
NR1I3-229ENST00000511748 KRTAP13-1Q8IUC0 172 aa3.8□□□□□ -1.8
NR1I3-229ENST00000511748 TMEM141Q96I45 108 aa3.8□□□□□ -1.8
NR1I3-229ENST00000511748 SMIM2Q9BVW6 85 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms