RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 CFAP161Q6P656 301 aa6.28□□□□□ -1.4
SNF8-210ENST00000511214 LINC01006Q8NI28 216 aa6.28□□□□□ -1.4
SNF8-210ENST00000511214 PRO0255Q9UI72 69 aa6.28□□□□□ -1.4
SNF8-210ENST00000511214 PKD1L2Q7Z442 2459 aa6.28□□□□□ -1.4
SNF8-210ENST00000511214 CREBBPQ92793 2442 aa6.28□□□□□ -1.4
SNF8-210ENST00000511214 LYRM9A8MSI8 78 aa6.27□□□□□ -1.41
SNF8-210ENST00000511214 XCL1P47992 114 aa6.27□□□□□ -1.41
SNF8-210ENST00000511214 KRTAP10-9P60411 292 aa6.27□□□□□ -1.41
SNF8-210ENST00000511214 C3orf56Q8N813 242 aa6.27□□□□□ -1.41
SNF8-210ENST00000511214 MDFIQ99750 246 aa6.27□□□□□ -1.41
SNF8-210ENST00000511214 ITPR1Q14643 2758 aa6.26□□□□□ -1.41
SNF8-210ENST00000511214 LOC110117498A0A087WWA1 95 aa6.26□□□□□ -1.41
SNF8-210ENST00000511214 SLPIP03973 132 aa6.26□□□□□ -1.41
SNF8-210ENST00000511214 PDE6GP18545 87 aa6.26□□□□□ -1.41
SNF8-210ENST00000511214 UBL5Q9BZL1 73 aa6.26□□□□□ -1.41
SNF8-210ENST00000511214 WFDC10AQ9H1F0 79 aa6.26□□□□□ -1.41
SNF8-210ENST00000511214 ESM1Q9NQ30 184 aa6.26□□□□□ -1.41
SNF8-210ENST00000511214 EPG5Q9HCE0 2579 aa6.26□□□□□ -1.41
SNF8-210ENST00000511214 LINC00575Q6W349 94 aa6.25□□□□□ -1.41
SNF8-210ENST00000511214 KMT2BQ9UMN6 2715 aaPredicted RBP6.24□□□□□ -1.41
SNF8-210ENST00000511214 ZNF561-AS1K7EIQ3 104 aa6.24□□□□□ -1.41
SNF8-210ENST00000511214 GHRHP01286 108 aa6.24□□□□□ -1.41
SNF8-210ENST00000511214 C6orf223Q8N319 242 aa6.24□□□□□ -1.41
SNF8-210ENST00000511214 SPG11Q96JI7 2443 aa6.24□□□□□ -1.41
SNF8-210ENST00000511214 RELNP78509 3460 aa6.23□□□□□ -1.41
SNF8-210ENST00000511214 DEFB130BP0DP73 79 aa6.23□□□□□ -1.41
SNF8-210ENST00000511214 DEFB130AP0DP74 79 aa6.23□□□□□ -1.41
SNF8-210ENST00000511214 CHCHD10Q8WYQ3 142 aaPredicted RBP6.23□□□□□ -1.41
SNF8-210ENST00000511214 BBC3Q96PG8 261 aaPredicted RBP6.23□□□□□ -1.41
SNF8-210ENST00000511214 X6R8D5 127 aa6.23□□□□□ -1.41
SNF8-210ENST00000511214 A0A087WVE0 104 aa6.22□□□□□ -1.41
SNF8-210ENST00000511214 GVQW2A0A096LPI5 108 aaPredicted RBP6.22□□□□□ -1.41
SNF8-210ENST00000511214 A0A0J9YWU9 116 aa6.22□□□□□ -1.41
SNF8-210ENST00000511214 PRB1P04280 392 aa6.22□□□□□ -1.41
SNF8-210ENST00000511214 IGHV4-30-4P0DP06 118 aa6.22□□□□□ -1.41
SNF8-210ENST00000511214 RBM3P98179 157 aaKnown RBP6.22□□□□□ -1.41
SNF8-210ENST00000511214 REG3AQ06141 175 aa6.22□□□□□ -1.41
SNF8-210ENST00000511214 Q6ZQT0 140 aa6.22□□□□□ -1.41
SNF8-210ENST00000511214 DPH3Q96FX2 82 aa6.22□□□□□ -1.41
SNF8-210ENST00000511214 C11orf68Q9H3H3 251 aaKnown RBP6.22□□□□□ -1.41
SNF8-210ENST00000511214 IGSF10Q6WRI0 2623 aa6.22□□□□□ -1.41
SNF8-210ENST00000511214 IGLV6-57P01721 117 aa6.21□□□□□ -1.42
SNF8-210ENST00000511214 PLA2G2AP14555 144 aa6.21□□□□□ -1.42
SNF8-210ENST00000511214 C6orf99Q4VX62 202 aa6.21□□□□□ -1.42
SNF8-210ENST00000511214 C5orf47Q569G3 176 aa6.21□□□□□ -1.42
SNF8-210ENST00000511214 C9orf66Q5T8R8 295 aa6.21□□□□□ -1.42
SNF8-210ENST00000511214 LINC00269Q8N2A0 174 aa6.21□□□□□ -1.42
SNF8-210ENST00000511214 ZFYVE26Q68DK2 2539 aa6.21□□□□□ -1.42
SNF8-210ENST00000511214 ASH1LQ9NR48 2969 aaKnown RBP6.2□□□□□ -1.42
SNF8-210ENST00000511214 TRBV7-6A0A0J9YX20 115 aa6.2□□□□□ -1.42
SNF8-210ENST00000511214 LOC107984640A0A0U1RRK4 108 aa6.2□□□□□ -1.42
SNF8-210ENST00000511214 LOC100996750A0A140TA64 210 aa6.2□□□□□ -1.42
SNF8-210ENST00000511214 HILS1P60008 231 aa6.2□□□□□ -1.42
SNF8-210ENST00000511214 FAM19A5Q7Z5A7 132 aaPredicted RBP6.2□□□□□ -1.42
SNF8-210ENST00000511214 KRTAP4-6Q9BYQ5 205 aa6.2□□□□□ -1.42
SNF8-210ENST00000511214 TRAV7A0A075B6U4 112 aa6.19□□□□□ -1.42
SNF8-210ENST00000511214 ANGP03950 147 aaKnown RBP6.19□□□□□ -1.42
SNF8-210ENST00000511214 PRR3P79522 188 aaKnown RBP6.19□□□□□ -1.42
SNF8-210ENST00000511214 CXCL6P80162 114 aa6.19□□□□□ -1.42
SNF8-210ENST00000511214 ZNF843Q8N446 348 aa6.19□□□□□ -1.42
SNF8-210ENST00000511214 LINC00482Q8N8I6 264 aa6.19□□□□□ -1.42
SNF8-210ENST00000511214 WFDC11Q8NEX6 87 aa6.19□□□□□ -1.42
SNF8-210ENST00000511214 ANKRD17O75179 2603 aaKnown RBP6.19□□□□□ -1.42
SNF8-210ENST00000511214 KRTAP1-1Q07627 177 aa6.18□□□□□ -1.42
SNF8-210ENST00000511214 SPAG11BQ08648 103 aa6.18□□□□□ -1.42
SNF8-210ENST00000511214 LELP1Q5T871 98 aa6.18□□□□□ -1.42
SNF8-210ENST00000511214 CLPSL2Q6UWE3 100 aa6.18□□□□□ -1.42
SNF8-210ENST00000511214 ENHOQ6UWT2 76 aa6.18□□□□□ -1.42
SNF8-210ENST00000511214 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.18□□□□□ -1.42
SNF8-210ENST00000511214 DSCR8Q96T75 97 aa6.18□□□□□ -1.42
SNF8-210ENST00000511214 CYSTM1Q9H1C7 97 aa6.18□□□□□ -1.42
SNF8-210ENST00000511214 CELSR1Q9NYQ6 3014 aa6.18□□□□□ -1.42
SNF8-210ENST00000511214 CHD6Q8TD26 2715 aa6.18□□□□□ -1.42
SNF8-210ENST00000511214 APOC4P55056 127 aa6.17□□□□□ -1.42
SNF8-210ENST00000511214 FAM19A1Q7Z5A9 133 aa6.17□□□□□ -1.42
SNF8-210ENST00000511214 PRR34Q9NV39 138 aa6.17□□□□□ -1.42
SNF8-210ENST00000511214 USP9XQ93008 2570 aaPredicted RBP6.17□□□□□ -1.42
SNF8-210ENST00000511214 SVEP1Q4LDE5 3571 aa6.17□□□□□ -1.42
SNF8-210ENST00000511214 TRAV23DV6A0A075B6W5 121 aa6.16□□□□□ -1.42
SNF8-210ENST00000511214 DIRC1Q969H9 104 aa6.16□□□□□ -1.42
SNF8-210ENST00000511214 LAMTOR3Q9UHA4 124 aa6.16□□□□□ -1.42
SNF8-210ENST00000511214 USP9YO00507 2555 aaPredicted RBP6.16□□□□□ -1.42
SNF8-210ENST00000511214 FAM208BQ5VWN6 2430 aa6.15□□□□□ -1.42
SNF8-210ENST00000511214 MIFP14174 115 aa6.15□□□□□ -1.42
SNF8-210ENST00000511214 LINC01547P58512 204 aaPredicted RBP6.15□□□□□ -1.42
SNF8-210ENST00000511214 DAD1P61803 113 aa6.15□□□□□ -1.42
SNF8-210ENST00000511214 C9orf116Q5BN46 136 aaPredicted RBP6.15□□□□□ -1.42
SNF8-210ENST00000511214 Q6ZVQ6 151 aa6.15□□□□□ -1.42
SNF8-210ENST00000511214 Q8NDZ9 215 aa6.15□□□□□ -1.42
SNF8-210ENST00000511214 TRBV7-4A0A0J9YYF1 115 aa6.14□□□□□ -1.43
SNF8-210ENST00000511214 CYSRT1A8MQ03 144 aa6.14□□□□□ -1.43
SNF8-210ENST00000511214 EPM2AB3EWF7 344 aa6.14□□□□□ -1.43
SNF8-210ENST00000511214 KLKP1Q107X0 134 aa6.14□□□□□ -1.43
SNF8-210ENST00000511214 UNQ6190/PRO20217Q6UXQ8 127 aa6.14□□□□□ -1.43
SNF8-210ENST00000511214 ZFHX3Q15911 3703 aa6.14□□□□□ -1.43
SNF8-210ENST00000511214 IGLV10-54A0A075B6I4 117 aa6.13□□□□□ -1.43
SNF8-210ENST00000511214 A0A096LPF7 62 aa6.13□□□□□ -1.43
SNF8-210ENST00000511214 FAM236DA0A1B0GTK5 79 aa6.13□□□□□ -1.43
SNF8-210ENST00000511214 NDUFC1O43677 76 aa6.13□□□□□ -1.43
SNF8-210ENST00000511214 SPART-AS1P0CW21 52 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms