RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 Q8N8P6 123 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 LINC00304Q8N9R0 145 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 C20orf203Q8NBC4 194 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 OR13C6PQ8NH95 151 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.86□□□□□ -2.11
CLOCK-209ENST00000511124 A0A0J9YXV3 536 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 IGKV2-29A2NJV5 120 aaPredicted RBP1.86□□□□□ -2.11
CLOCK-209ENST00000511124 B5MCH6 92 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 TMEM170BQ5T4T1 132 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 Q8IZM0 81 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 COX7B2Q8TF08 81 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 SS18L2Q9UHA2 77 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 DNAH9Q9NYC9 4486 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 TSPAN13O95857 204 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 IGLV7-43P04211 117 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 KRTAP10-2P60368 255 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 PMVKQ15126 192 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 BAGE3Q86Y29 109 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 MTURNQ8N3F0 131 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 GATD1Q8NB37 220 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 M0R378 163 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 TRGC2P03986 189 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 BTCP35070 178 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 SSBP3-AS1Q7Z2R9 100 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 ERASQ7Z444 233 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 TIMM17AQ99595 171 aa1.86□□□□□ -2.11
CLOCK-209ENST00000511124 TRBV27A0A0K0K1C4 114 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 ZNF861PO60384 105 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 BCE1O60756 84 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 IGLC6P0CF74 106 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 C9orf153Q5TBE3 101 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 C2orf66Q6UXQ4 117 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 COX6B2Q6YFQ2 88 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 DNAH8Q96JB1 4490 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 DNAH2Q9P225 4427 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 TLX1NBP0CAT3 122 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 PLNP26678 52 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 RPL23P62829 140 aaKnown RBP1.85□□□□□ -2.11
CLOCK-209ENST00000511124 HIGD2AQ9BW72 106 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 RNASE7Q9H1E1 156 aaKnown RBP1.85□□□□□ -2.11
CLOCK-209ENST00000511124 DNAH17Q9UFH2 4485 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 LAMA1P25391 3075 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 MUC21A0A0G2JKD1 596 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 MUC21A0A140T8X8 626 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 H0Y9J4 135 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 PRYO14603 147 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 PRR3P79522 188 aaKnown RBP1.85□□□□□ -2.11
CLOCK-209ENST00000511124 LCE1DQ5T752 114 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 MRPL55Q7Z7F7 128 aaKnown RBP1.85□□□□□ -2.11
CLOCK-209ENST00000511124 NRACQ8N912 160 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 DSCR8Q96T75 97 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 CDC42SE2Q9NRR3 84 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 DHRS4-AS1Q9P1J3 65 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 IGLV7-46A0A075B6I9 117 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 H2BFSP57053 126 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 PRR9Q5T870 116 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 ENHOQ6UWT2 76 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 SDIM1Q6ZPB5 146 aa1.85□□□□□ -2.11
CLOCK-209ENST00000511124 Q6ZRN7 208 aaPredicted RBP1.85□□□□□ -2.11
CLOCK-209ENST00000511124 LEPROTO15243 131 aa1.84□□□□□ -2.11
CLOCK-209ENST00000511124 SPINK1P00995 79 aa1.84□□□□□ -2.11
CLOCK-209ENST00000511124 HBDP02042 147 aa1.84□□□□□ -2.11
CLOCK-209ENST00000511124 SNRPEP62304 92 aaKnown RBP1.84□□□□□ -2.11
CLOCK-209ENST00000511124 SPACA4Q8TDM5 124 aa1.84□□□□□ -2.11
CLOCK-209ENST00000511124 LINC01600Q96MT4 127 aa1.84□□□□□ -2.11
CLOCK-209ENST00000511124 LRBAP50851 2863 aa1.84□□□□□ -2.11
CLOCK-209ENST00000511124 S100A1P23297 94 aa1.84□□□□□ -2.12
CLOCK-209ENST00000511124 SCGB1D4Q6XE38 83 aa1.84□□□□□ -2.12
CLOCK-209ENST00000511124 ATMQ13315 3056 aa1.84□□□□□ -2.12
CLOCK-209ENST00000511124 A0A0U1RRA0 63 aa1.84□□□□□ -2.12
CLOCK-209ENST00000511124 RPL37AP8A6NKH3 93 aa1.84□□□□□ -2.12
CLOCK-209ENST00000511124 H7C2G1 150 aa1.84□□□□□ -2.12
CLOCK-209ENST00000511124 PRM2P04554 102 aa1.84□□□□□ -2.12
CLOCK-209ENST00000511124 ZNF80P51504 273 aaPredicted RBP1.84□□□□□ -2.12
CLOCK-209ENST00000511124 FOXA3P55318 350 aaPredicted RBP1.84□□□□□ -2.12
CLOCK-209ENST00000511124 LINC00173Q6ZV60 143 aa1.84□□□□□ -2.12
CLOCK-209ENST00000511124 CNFNQ9BYD5 112 aa1.84□□□□□ -2.12
CLOCK-209ENST00000511124 FREM2Q5SZK8 3169 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 TINCRA0A1B0GVN0 87 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 LYRM7Q5U5X0 104 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 Q6ZSA8 131 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 SVBPQ8N300 66 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 TRAPPC1Q9Y5R8 145 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 D6R8Y8 96 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 COX6CP09669 75 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 S100A2P29034 98 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 PFN2P35080 140 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 ZC2HC1BQ5TFG8 222 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 PAM16Q9Y3D7 125 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 PKD1P98161 4303 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 PANO1I0J062 215 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 TSHBP01222 138 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 PRB4P10163 310 aaPredicted RBP1.83□□□□□ -2.12
CLOCK-209ENST00000511124 MRPL51Q4U2R6 128 aaKnown RBP1.83□□□□□ -2.12
CLOCK-209ENST00000511124 C6orf99Q4VX62 202 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 NUP35Q8NFH5 326 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 RPS10P5Q9NQ39 176 aa1.83□□□□□ -2.12
CLOCK-209ENST00000511124 VPS13AQ96RL7 3174 aa1.82□□□□□ -2.12
CLOCK-209ENST00000511124 NF1P21359 2839 aa1.82□□□□□ -2.12
CLOCK-209ENST00000511124 TRBV24-1A0A075B6N3 115 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms