RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 SCGB3A1Q96QR1 104 aa2.76□□□□□ -1.97
SMAD1-208ENST00000510948 SPANXA1Q9NS26 97 aa2.76□□□□□ -1.97
SMAD1-208ENST00000510948 ANAPC11Q9NYG5 84 aa2.76□□□□□ -1.97
SMAD1-208ENST00000510948 HHLA3Q9XRX5 114 aa2.76□□□□□ -1.97
SMAD1-208ENST00000510948 ICOSQ9Y6W8 199 aa2.76□□□□□ -1.97
SMAD1-208ENST00000510948 CSMD3Q7Z407 3707 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 IGLV4-69A0A075B6H9 119 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 A0A087WX48 190 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 TRBV6-8A0A0A6YYG3 113 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 TRAV10A0A0B4J240 114 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 A0A0J9YY99 117 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 F8VRH5 84 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 OXTP01178 125 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 HTN3P15516 51 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 ZNF25P17030 456 aaPredicted RBP2.75□□□□□ -1.97
SMAD1-208ENST00000510948 MRPS36P82909 103 aaKnown RBP2.75□□□□□ -1.97
SMAD1-208ENST00000510948 FAM104AQ969W3 186 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 TMEM141Q96I45 108 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 AMELXQ99217 191 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 PMCHL2Q9BQD1 86 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 TMEM243Q9BU79 118 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 CHAC1Q9BUX1 264 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 TIMM21Q9BVV7 248 aa2.75□□□□□ -1.97
SMAD1-208ENST00000510948 MRPL35Q9NZE8 188 aaKnown RBP2.75□□□□□ -1.97
SMAD1-208ENST00000510948 DYNC2H1Q8NCM8 4307 aaKnown RBP2.74□□□□□ -1.97
SMAD1-208ENST00000510948 DEFB131BA0A096LNP1 70 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 UBE2L6O14933 153 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 IGKCP01834 107 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 IGLC3P0DOY3 106 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 FGF6P10767 208 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 PLNP26678 52 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 S100A12P80511 92 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 DEFA6Q01524 100 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 PMVKQ15126 192 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 LELP1Q5T871 98 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 CEMP1Q6PRD7 247 aaPredicted RBP2.74□□□□□ -1.97
SMAD1-208ENST00000510948 SH2D6Q7Z4S9 175 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 ATOH7Q8N100 152 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 C15orf53Q8NAA6 179 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 VAMP8Q9BV40 100 aa2.74□□□□□ -1.97
SMAD1-208ENST00000510948 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.73□□□□□ -1.97
SMAD1-208ENST00000510948 DPM2O94777 84 aa2.73□□□□□ -1.97
SMAD1-208ENST00000510948 ZNF22P17026 224 aaPredicted RBP2.73□□□□□ -1.97
SMAD1-208ENST00000510948 PRR3P79522 188 aaKnown RBP2.73□□□□□ -1.97
SMAD1-208ENST00000510948 SMAGPQ0VAQ4 97 aa2.73□□□□□ -1.97
SMAD1-208ENST00000510948 SPATA45Q537H7 98 aa2.73□□□□□ -1.97
SMAD1-208ENST00000510948 MPV17L2Q567V2 206 aa2.73□□□□□ -1.97
SMAD1-208ENST00000510948 RNASE13Q5GAN3 156 aaKnown RBP2.73□□□□□ -1.97
SMAD1-208ENST00000510948 FAM19A3Q7Z5A8 133 aa2.73□□□□□ -1.97
SMAD1-208ENST00000510948 ZNF664Q8N3J9 261 aa2.73□□□□□ -1.97
SMAD1-208ENST00000510948 C2orf88Q9BSF0 95 aa2.73□□□□□ -1.97
SMAD1-208ENST00000510948 CDC42SE2Q9NRR3 84 aa2.73□□□□□ -1.97
SMAD1-208ENST00000510948 LYSTQ99698 3801 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 IGLV4-60A0A075B6I1 120 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 TINCRA0A1B0GVN0 87 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 C11orf86A6NJI1 115 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 TSTD3H0UI37 97 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 TLX1NBP0CAT3 122 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 UBE2D1P51668 147 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 PKIAP61925 76 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 RBX1P62877 108 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 AMMECR1LQ6DCA0 310 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 LINC00336Q6ZUF6 198 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 C15orf56Q8N910 161 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 OR5A1Q8NGJ0 315 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 CST9LQ9H4G1 147 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 STARD9Q9P2P6 4700 aa2.72□□□□□ -1.97
SMAD1-208ENST00000510948 IGLV1-50A0A075B6I6 118 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 IGKV2D-26A0A0A0MRZ7 120 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 A0A0J9YXV3 536 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 A0A1B0GVX0 72 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 TMEM223A0PJW6 202 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 NUPR2A6NF83 97 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 HSBP1L1C9JCN9 74 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 PFN2P35080 140 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 HERVK_113P63121 156 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 SEC11AP67812 179 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 TMEM170BQ5T4T1 132 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 LYPD5Q6UWN5 251 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 WFDC10BQ8IUB3 73 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 UPK3BQ9BT76 320 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 TP73-AS1Q9UF72 201 aa2.71□□□□□ -1.98
SMAD1-208ENST00000510948 TRAV13-1A0A0B4J241 112 aa2.7□□□□□ -1.98
SMAD1-208ENST00000510948 TRAV8-6A0A0B4J262 113 aa2.7□□□□□ -1.98
SMAD1-208ENST00000510948 ANGP03950 147 aaKnown RBP2.7□□□□□ -1.98
SMAD1-208ENST00000510948 COX8AP10176 69 aa2.7□□□□□ -1.98
SMAD1-208ENST00000510948 TCTAP57738 103 aa2.7□□□□□ -1.98
SMAD1-208ENST00000510948 TSPEAR-AS2P59090 65 aa2.7□□□□□ -1.98
SMAD1-208ENST00000510948 ESRGQ1W209 222 aa2.7□□□□□ -1.98
SMAD1-208ENST00000510948 LINC01556Q5JQF7 62 aa2.7□□□□□ -1.98
SMAD1-208ENST00000510948 BOD1L2Q8IYS8 172 aa2.7□□□□□ -1.98
SMAD1-208ENST00000510948 LINC00469Q8N7U9 141 aa2.7□□□□□ -1.98
SMAD1-208ENST00000510948 TTTY13Q9BZ97 58 aa2.7□□□□□ -1.98
SMAD1-208ENST00000510948 PRO1933Q9H354 126 aa2.7□□□□□ -1.98
SMAD1-208ENST00000510948 UQCR10Q9UDW1 63 aa2.7□□□□□ -1.98
SMAD1-208ENST00000510948 MRPS16Q9Y3D3 137 aaKnown RBP2.7□□□□□ -1.98
SMAD1-208ENST00000510948 DNAH1Q9P2D7 4330 aa2.69□□□□□ -1.98
SMAD1-208ENST00000510948 IGHV3OR16-9A0A0B4J2B5 98 aa2.69□□□□□ -1.98
SMAD1-208ENST00000510948 IGHV1-58A0A0C4DH39 117 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms