RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 F8VRH5 84 aa2.87□□□□□ -1.95
NIPBL-206ENST00000509429 I3L3M4 83 aa2.87□□□□□ -1.95
NIPBL-206ENST00000509429 PPP1R17O96001 155 aa2.87□□□□□ -1.95
NIPBL-206ENST00000509429 DEFB113Q30KQ7 82 aa2.87□□□□□ -1.95
NIPBL-206ENST00000509429 KPRPQ5T749 579 aaPredicted RBP2.87□□□□□ -1.95
NIPBL-206ENST00000509429 SMIM29Q86T20 159 aa2.87□□□□□ -1.95
NIPBL-206ENST00000509429 Q86TA4 180 aa2.87□□□□□ -1.95
NIPBL-206ENST00000509429 PLAC8Q9NZF1 115 aa2.87□□□□□ -1.95
NIPBL-206ENST00000509429 LINC01558Q9Y6Z2 57 aa2.87□□□□□ -1.95
NIPBL-206ENST00000509429 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.86□□□□□ -1.95
NIPBL-206ENST00000509429 A0A0J9YX75 114 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 LCE6AA0A183 80 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 LYZP61626 148 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 SPAG11BQ08648 103 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 HIGD2BQ4VC39 106 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 LINC00483Q53H64 154 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 SPAG11AQ6PDA7 123 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 KRTAP26-1Q6PEX3 210 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 FDCSPQ8NFU4 85 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 LINC00167Q96N53 147 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 TTTY12Q9BZ98 90 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 UBL5Q9BZL1 73 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 TMEM14CQ9P0S9 112 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 A0A0C4DFX4 3053 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 ZGRF1Q86YA3 2104 aa2.86□□□□□ -1.95
NIPBL-206ENST00000509429 COL27A1Q8IZC6 1860 aaPredicted RBP2.86□□□□□ -1.95
NIPBL-206ENST00000509429 CACNA1EQ15878 2313 aa2.85□□□□□ -1.95
NIPBL-206ENST00000509429 TRBV10-1A0A0K0K1A3 114 aa2.85□□□□□ -1.95
NIPBL-206ENST00000509429 PANO1I0J062 215 aa2.85□□□□□ -1.95
NIPBL-206ENST00000509429 PRCDQ00LT1 54 aa2.85□□□□□ -1.95
NIPBL-206ENST00000509429 ESPL1Q14674 2120 aa2.85□□□□□ -1.95
NIPBL-206ENST00000509429 AMELXQ99217 191 aa2.85□□□□□ -1.95
NIPBL-206ENST00000509429 UNC13CQ8NB66 2214 aa2.85□□□□□ -1.95
NIPBL-206ENST00000509429 SEC16AO15027 2179 aa2.84□□□□□ -1.95
NIPBL-206ENST00000509429 ODF3BA8MYP8 253 aa2.84□□□□□ -1.95
NIPBL-206ENST00000509429 NDUFB1O75438 58 aa2.84□□□□□ -1.95
NIPBL-206ENST00000509429 NDUFA3O95167 84 aa2.84□□□□□ -1.95
NIPBL-206ENST00000509429 C1orf137Q5JT78 98 aa2.84□□□□□ -1.95
NIPBL-206ENST00000509429 LYPD1Q8N2G4 141 aa2.84□□□□□ -1.95
NIPBL-206ENST00000509429 ZCCHC13Q8WW36 166 aaKnown RBP2.84□□□□□ -1.95
NIPBL-206ENST00000509429 PRR34Q9NV39 138 aa2.84□□□□□ -1.95
NIPBL-206ENST00000509429 ZNRD1Q9P1U0 126 aa2.84□□□□□ -1.95
NIPBL-206ENST00000509429 ASCC3Q8N3C0 2202 aaKnown RBP2.83□□□□□ -1.96
NIPBL-206ENST00000509429 ASXL3Q9C0F0 2248 aa2.83□□□□□ -1.96
NIPBL-206ENST00000509429 TRAV21A0A0B4J279 112 aa2.83□□□□□ -1.96
NIPBL-206ENST00000509429 IGHV3-64DA0A0J9YX35 117 aa2.83□□□□□ -1.96
NIPBL-206ENST00000509429 M0R1W7 72 aa2.83□□□□□ -1.96
NIPBL-206ENST00000509429 IGKV3-15P01624 115 aa2.83□□□□□ -1.96
NIPBL-206ENST00000509429 SPINK9Q5DT21 86 aa2.83□□□□□ -1.96
NIPBL-206ENST00000509429 SPANXA2-OT1Q8N9U9 137 aa2.83□□□□□ -1.96
NIPBL-206ENST00000509429 DNAJC13O75165 2243 aa2.83□□□□□ -1.96
NIPBL-206ENST00000509429 C5orf42Q9H799 3197 aa2.82□□□□□ -1.96
NIPBL-206ENST00000509429 MKI67P46013 3256 aaKnown RBP2.82□□□□□ -1.96
NIPBL-206ENST00000509429 ARHGAP32A7KAX9 2087 aa2.82□□□□□ -1.96
NIPBL-206ENST00000509429 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
NIPBL-206ENST00000509429 JMJD7-PLA2G4BH0Y9G9 81 aa2.82□□□□□ -1.96
NIPBL-206ENST00000509429 M0R3E3 92 aa2.82□□□□□ -1.96
NIPBL-206ENST00000509429 ZNF137PP52743 207 aa2.82□□□□□ -1.96
NIPBL-206ENST00000509429 ERHP84090 104 aaKnown RBP2.82□□□□□ -1.96
NIPBL-206ENST00000509429 KRTAP25-1Q3LHN0 102 aa2.82□□□□□ -1.96
NIPBL-206ENST00000509429 C10orf113Q5VZT2 155 aa2.82□□□□□ -1.96
NIPBL-206ENST00000509429 SPINK14Q6IE38 97 aa2.82□□□□□ -1.96
NIPBL-206ENST00000509429 MRPL36Q9P0J6 103 aaKnown RBP2.82□□□□□ -1.96
NIPBL-206ENST00000509429 MALRD1Q5VYJ5 2156 aa2.82□□□□□ -1.96
NIPBL-206ENST00000509429 CACNA1GO43497 2377 aa2.82□□□□□ -1.96
NIPBL-206ENST00000509429 LAMA2P24043 3122 aaKnown RBP2.82□□□□□ -1.96
NIPBL-206ENST00000509429 IGLV2-18A0A075B6J9 118 aa2.81□□□□□ -1.96
NIPBL-206ENST00000509429 IGHV3-64A0A075B6Q5 118 aa2.81□□□□□ -1.96
NIPBL-206ENST00000509429 TRBV6-1A0A0K0K1D8 114 aa2.81□□□□□ -1.96
NIPBL-206ENST00000509429 H3BQ85 93 aa2.81□□□□□ -1.96
NIPBL-206ENST00000509429 IGHV3-53P01767 116 aa2.81□□□□□ -1.96
NIPBL-206ENST00000509429 CTSGP08311 255 aa2.81□□□□□ -1.96
NIPBL-206ENST00000509429 RPL39P5Q59GN2 51 aa2.81□□□□□ -1.96
NIPBL-206ENST00000509429 WFDC9Q8NEX5 89 aa2.81□□□□□ -1.96
NIPBL-206ENST00000509429 DMAC1Q96GE9 116 aa2.81□□□□□ -1.96
NIPBL-206ENST00000509429 MINOS1-NBL1R4GNA1 71 aa2.81□□□□□ -1.96
NIPBL-206ENST00000509429 BRWD1Q9NSI6 2320 aa2.8□□□□□ -1.96
NIPBL-206ENST00000509429 MED12Q93074 2177 aa2.8□□□□□ -1.96
NIPBL-206ENST00000509429 DEFB108AA8MXU0 73 aa2.8□□□□□ -1.96
NIPBL-206ENST00000509429 IGKV1-17P01599 117 aa2.8□□□□□ -1.96
NIPBL-206ENST00000509429 Q8N377 158 aa2.8□□□□□ -1.96
NIPBL-206ENST00000509429 C14orf178Q8N769 122 aaPredicted RBP2.8□□□□□ -1.96
NIPBL-206ENST00000509429 KLHL30-AS1Q8NEE0 82 aa2.8□□□□□ -1.96
NIPBL-206ENST00000509429 TMEM167AQ8TBQ9 72 aa2.8□□□□□ -1.96
NIPBL-206ENST00000509429 COX7B2Q8TF08 81 aa2.8□□□□□ -1.96
NIPBL-206ENST00000509429 LINC00208Q96KT6 92 aa2.8□□□□□ -1.96
NIPBL-206ENST00000509429 HIGD2AQ9BW72 106 aa2.8□□□□□ -1.96
NIPBL-206ENST00000509429 CDH23Q9H251 3354 aa2.8□□□□□ -1.96
NIPBL-206ENST00000509429 ZFHX3Q15911 3703 aa2.79□□□□□ -1.96
NIPBL-206ENST00000509429 LAMA3Q16787 3333 aa2.79□□□□□ -1.96
NIPBL-206ENST00000509429 UNC80Q8N2C7 3258 aa2.79□□□□□ -1.96
NIPBL-206ENST00000509429 REV3LO60673 3130 aa2.79□□□□□ -1.96
NIPBL-206ENST00000509429 USF3Q68DE3 2245 aa2.79□□□□□ -1.96
NIPBL-206ENST00000509429 NUPR2A6NF83 97 aa2.79□□□□□ -1.96
NIPBL-206ENST00000509429 HCP5Q6MZN7 132 aa2.79□□□□□ -1.96
NIPBL-206ENST00000509429 KNL1Q8NG31 2342 aa2.78□□□□□ -1.96
NIPBL-206ENST00000509429 IGKV3-7A0A075B6H7 116 aa2.78□□□□□ -1.96
NIPBL-206ENST00000509429 IGLV7-46A0A075B6I9 117 aa2.78□□□□□ -1.96
NIPBL-206ENST00000509429 PDE6GP18545 87 aa2.78□□□□□ -1.96
NIPBL-206ENST00000509429 SPINK7P58062 85 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms