RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 HSPB8Q9UJY1 196 aa2.34□□□□□ -2.03
NFKB1-208ENST00000509165 TRBV7-3A0A075B6L6 115 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 DEFB131BA0A096LNP1 70 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 TRAV26-2A0A0B4J265 109 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 TRBV6-4A0A1B0GX49 114 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 SDHAF1A6NFY7 115 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 SMKR1H3BMG3 65 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 I3L3M4 83 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 LEPROTL1O95214 131 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 NCR2O95944 276 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 HBDP02042 147 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 ATP5G1P05496 136 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 CRYBA4P53673 196 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 RHOHQ15669 191 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 PMCHL1Q16048 86 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 IQCJQ1A5X6 159 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 PYY3Q5JQD4 70 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 RNASEKQ6P5S7 137 aaKnown RBP2.33□□□□□ -2.04
NFKB1-208ENST00000509165 ERASQ7Z444 233 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 DAZ4Q86SG3 579 aaKnown RBP2.33□□□□□ -2.04
NFKB1-208ENST00000509165 LINC01561Q8N1V8 128 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 FAM19A2Q8N3H0 131 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 OR4C5Q8NGB2 326 aa2.33□□□□□ -2.04
NFKB1-208ENST00000509165 RPL39LQ96EH5 51 aaKnown RBP2.33□□□□□ -2.04
NFKB1-208ENST00000509165 NOP10Q9NPE3 64 aaKnown RBP2.33□□□□□ -2.04
NFKB1-208ENST00000509165 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.32□□□□□ -2.04
NFKB1-208ENST00000509165 TRGV2A0A075B6R0 118 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 TRGV1A0A0A0MS02 117 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 LOC389332A0A1B0GUA5 103 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 A0A1B0GWB2 263 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 SYS1-DBNDD2H3BUS1 97 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 ATP5LO75964 103 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 SMR3BP02814 79 aaPredicted RBP2.32□□□□□ -2.04
NFKB1-208ENST00000509165 MGPP08493 103 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 C3orf79P0CE67 100 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 DAD1P61803 113 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 ZNF56Q15929 161 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 FAM74A4Q5TZK3 123 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 SLC25A29Q8N8R3 303 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 Q8N976 141 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 C15orf53Q8NAA6 179 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 TOMM6Q96B49 74 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 IFI27L1Q96BM0 104 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 C12orf57Q99622 126 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 UPK3BQ9BT76 320 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 MAP1LC3CQ9BXW4 147 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 GTSF1LQ9H1H1 148 aa2.32□□□□□ -2.04
NFKB1-208ENST00000509165 MRPL16Q9NX20 251 aaKnown RBP2.32□□□□□ -2.04
NFKB1-208ENST00000509165 TRAV26-1A0A087WT03 109 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 A0A096LPF7 62 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 TRAV12-1A0A0B4J245 112 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 C20orf202A1L168 122 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 IGIPA6NJ69 53 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.31□□□□□ -2.04
NFKB1-208ENST00000509165 P0DMU3 169 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 FAM231AP0DMU4 169 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 FAM231CP0DMU5 169 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 DEFB130BP0DP73 79 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 DEFB130AP0DP74 79 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 EMP1P54849 157 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 KRTDAPP60985 99 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 UBE2D3P61077 147 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 UBE2D2P62837 147 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 S100A12P80511 92 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 TMEM97Q5BJF2 176 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 LINC01545Q5VT33 79 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 TEX43Q6ZNM6 134 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 ZNRF2Q8NHG8 242 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 TMEM141Q96I45 108 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 TIMM17AQ99595 171 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 TIMM21Q9BVV7 248 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 PRO0255Q9UI72 69 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 HHLA3Q9XRX5 114 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 CYSLTR1Q9Y271 337 aa2.31□□□□□ -2.04
NFKB1-208ENST00000509165 CSDC2Q9Y534 153 aaKnown RBP2.31□□□□□ -2.04
NFKB1-208ENST00000509165 A0A087WX48 190 aa2.3□□□□□ -2.04
NFKB1-208ENST00000509165 IGHV3-73A0A0B4J1V6 119 aa2.3□□□□□ -2.04
NFKB1-208ENST00000509165 TRGV4A0A0C4DH28 118 aa2.3□□□□□ -2.04
NFKB1-208ENST00000509165 LRCOL1A6NCL2 159 aa2.3□□□□□ -2.04
NFKB1-208ENST00000509165 KRTAP4-16G5E9R7 235 aaPredicted RBP2.3□□□□□ -2.04
NFKB1-208ENST00000509165 MRPS36P82909 103 aaKnown RBP2.3□□□□□ -2.04
NFKB1-208ENST00000509165 SMAGPQ0VAQ4 97 aa2.3□□□□□ -2.04
NFKB1-208ENST00000509165 COTL1Q14019 142 aa2.3□□□□□ -2.04
NFKB1-208ENST00000509165 Q6ZRN7 208 aaPredicted RBP2.3□□□□□ -2.04
NFKB1-208ENST00000509165 LINC00173Q6ZV60 143 aa2.3□□□□□ -2.04
NFKB1-208ENST00000509165 MRPL52Q86TS9 123 aaKnown RBP2.3□□□□□ -2.04
NFKB1-208ENST00000509165 SCGB3A1Q96QR1 104 aa2.3□□□□□ -2.04
NFKB1-208ENST00000509165 PRADC1Q9BSG0 188 aa2.3□□□□□ -2.04
NFKB1-208ENST00000509165 SPANXA1Q9NS26 97 aa2.3□□□□□ -2.04
NFKB1-208ENST00000509165 MRPS16Q9Y3D3 137 aaKnown RBP2.3□□□□□ -2.04
NFKB1-208ENST00000509165 LINC00588Q9Y4M8 146 aa2.3□□□□□ -2.04
NFKB1-208ENST00000509165 TRBV6-8A0A0A6YYG3 113 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 IGLL5B9A064 214 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 F5H768 121 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 F8VRH5 84 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 ZNF25P17030 456 aaPredicted RBP2.29□□□□□ -2.04
NFKB1-208ENST00000509165 PLNP26678 52 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 FUSP35637 526 aaKnown RBP eCLIP2.29□□□□□ -2.04
NFKB1-208ENST00000509165 PKIAP61925 76 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 HAMPP81172 84 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms