RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 C4BP0C0L5 1744 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 PARP4Q9UKK3 1724 aaKnown RBP-0.5□□□□□ -2.49
GYPB-209ENST00000508618 TRBV6-1A0A0K0K1D8 114 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 FAM236AA0A1B0GUQ0 79 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 FAM236BA0A1B0GV22 79 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 TSTD3H0UI37 97 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 I3L2K1 104 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 K7EP34 96 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 CCL18P55774 89 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 UBE2G1P62253 170 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 CTAGE3PQ8IX95 158 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 FDCSPQ8NFU4 85 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 HIGD1AQ9Y241 93 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 HSPB11Q9Y547 144 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 PXDNQ92626 1479 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 MAP3K4Q9Y6R4 1608 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 WIZO95785 1651 aa-0.5□□□□□ -2.49
GYPB-209ENST00000508618 TRBV20-1A0A075B6N2 111 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 CTXND1A0A1B0GTU2 59 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 C20orf202A1L168 122 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 ARHGEF10O15013 1369 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 IFNA17P01571 189 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 COX6B1P14854 86 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 NCS1P62166 190 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 SCN7AQ01118 1682 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 TOPAZ1Q8N9V7 1692 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 APLNQ9ULZ1 77 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 SHANK2Q9UPX8 1470 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 RAPGEF2Q9Y4G8 1499 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 LINC00312Q9Y6C7 94 aa-0.51□□□□□ -2.49
GYPB-209ENST00000508618 MYH7P12883 1935 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 ITSN1Q15811 1721 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 KIAA0556O60303 1618 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 ARHGEF5Q12774 1597 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 MYOM3Q5VTT5 1437 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 TMEM2Q9UHN6 1383 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 A6NIN4 97 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 H0YJX3 145 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 PPP1R17O96001 155 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 IL5P05113 134 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 S100A3P33764 101 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 DEFB112Q30KQ8 113 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 PIGYQ3MUY2 71 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 CCDC153Q494R4 210 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 Q6ZUT4 128 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 SMIM15Q7Z3B0 74 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 PSMG3Q9BT73 122 aaPredicted RBP-0.52□□□□□ -2.49
GYPB-209ENST00000508618 GINS2Q9Y248 185 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 S4R3F8 94 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 A0A0G2JMZ2 1700 aa-0.52□□□□□ -2.49
GYPB-209ENST00000508618 TMEM131LA2VDJ0 1609 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 PRDM15P57071 1507 aaPredicted RBP-0.53□□□□□ -2.49
GYPB-209ENST00000508618 OVOS2A0A0J9YW53 1432 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 OVOS2Q6IE36 1432 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 LINC00959A0A1B0GUT2 108 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 DBIP07108 87 aaKnown RBP-0.53□□□□□ -2.49
GYPB-209ENST00000508618 SPRR1BP22528 89 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 ZNF818PQ6ZRF7 136 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 DEFB124Q8NES8 71 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 SPTSSAQ969W0 71 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 SDF2Q99470 211 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 AIF1LQ9BQI0 150 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 SEC11CQ9BY50 192 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 SAR1AQ9NR31 198 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 SHROOM2Q13796 1616 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 USP32Q8NFA0 1604 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 NRKQ7Z2Y5 1582 aa-0.53□□□□□ -2.49
GYPB-209ENST00000508618 CLASP1Q7Z460 1538 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 LRRC7Q96NW7 1537 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 EEA1Q15075 1411 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 PRG4Q92954 1404 aaPredicted RBP-0.54□□□□□ -2.5
GYPB-209ENST00000508618 NCOA3Q9Y6Q9 1424 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 RGPD3A6NKT7 1758 aaPredicted RBP-0.54□□□□□ -2.5
GYPB-209ENST00000508618 LRRC37AA6NMS7 1700 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 NRAPQ86VF7 1730 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 CRYBG1Q9Y4K1 1723 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 C9orf92A6NGG3 77 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 M0R135 149 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 PITX3O75364 302 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 SNCGO76070 127 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 PIPP12273 146 aaPredicted RBP-0.54□□□□□ -2.5
GYPB-209ENST00000508618 RRAS2P62070 204 aaPredicted RBP-0.54□□□□□ -2.5
GYPB-209ENST00000508618 HIST1H1AQ02539 215 aaPredicted RBP-0.54□□□□□ -2.5
GYPB-209ENST00000508618 MORN2Q502X0 79 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 Q6JHZ5 121 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 SMIM4Q8WVI0 70 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 SMIM3Q9BZL3 60 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 R4GMQ9 66 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 V9GYH0 126 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 MYOM1P52179 1685 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 NESP48681 1621 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 PEG3Q9GZU2 1588 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 EFCAB6Q5THR3 1501 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 NCOA2Q15596 1464 aa-0.54□□□□□ -2.5
GYPB-209ENST00000508618 DISP2A7MBM2 1401 aa-0.55□□□□□ -2.5
GYPB-209ENST00000508618 RGPD2P0DJD1 1756 aa-0.55□□□□□ -2.5
GYPB-209ENST00000508618 POLR1AO95602 1720 aaPredicted RBP-0.55□□□□□ -2.5
GYPB-209ENST00000508618 NUP188Q5SRE5 1749 aa-0.55□□□□□ -2.5
GYPB-209ENST00000508618 PKD1L3Q7Z443 1732 aa-0.55□□□□□ -2.5
GYPB-209ENST00000508618 ANKRD26Q9UPS8 1709 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms