RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 TPRXLQ17RH7 258 aa10.46□□□□□ -0.73
CLDND1-217ENST00000508071 LINC00173Q6ZV60 143 aa10.46□□□□□ -0.73
CLDND1-217ENST00000508071 LINC00304Q8N9R0 145 aa10.46□□□□□ -0.73
CLDND1-217ENST00000508071 LINC00167Q96N53 147 aa10.46□□□□□ -0.73
CLDND1-217ENST00000508071 AMELXQ99217 191 aa10.46□□□□□ -0.73
CLDND1-217ENST00000508071 LOC389332A0A1B0GUA5 103 aa10.45□□□□□ -0.74
CLDND1-217ENST00000508071 CYSLTR1Q9Y271 337 aa10.45□□□□□ -0.74
CLDND1-217ENST00000508071 IGLV7-46A0A075B6I9 117 aa10.44□□□□□ -0.74
CLDND1-217ENST00000508071 C2orf66Q6UXQ4 117 aa10.44□□□□□ -0.74
CLDND1-217ENST00000508071 UBE2AP49459 152 aa10.43□□□□□ -0.74
CLDND1-217ENST00000508071 FAM229BQ4G0N7 80 aa10.43□□□□□ -0.74
CLDND1-217ENST00000508071 AKAP14Q86UN6 197 aa10.43□□□□□ -0.74
CLDND1-217ENST00000508071 MAP1LC3AQ9H492 121 aa10.43□□□□□ -0.74
CLDND1-217ENST00000508071 GAGE10A6NGK3 116 aa10.42□□□□□ -0.74
CLDND1-217ENST00000508071 PRSS47A8MTI9 375 aa10.42□□□□□ -0.74
CLDND1-217ENST00000508071 HERVK_113P63121 156 aa10.42□□□□□ -0.74
CLDND1-217ENST00000508071 SEC11AP67812 179 aa10.42□□□□□ -0.74
CLDND1-217ENST00000508071 FAM19A3Q7Z5A8 133 aa10.42□□□□□ -0.74
CLDND1-217ENST00000508071 C9JQL5 133 aa10.41□□□□□ -0.74
CLDND1-217ENST00000508071 NPSP0C0P6 89 aa10.41□□□□□ -0.74
CLDND1-217ENST00000508071 CXCL5P42830 114 aa10.41□□□□□ -0.74
CLDND1-217ENST00000508071 ATP5L2Q7Z4Y8 100 aa10.41□□□□□ -0.74
CLDND1-217ENST00000508071 CDKN2A-AS1Q9UH64 79 aa10.41□□□□□ -0.74
CLDND1-217ENST00000508071 LAMTOR2Q9Y2Q5 125 aa10.41□□□□□ -0.74
CLDND1-217ENST00000508071 IGKV2D-26A0A0A0MRZ7 120 aa10.4□□□□□ -0.74
CLDND1-217ENST00000508071 ORMDL2Q53FV1 153 aa10.4□□□□□ -0.74
CLDND1-217ENST00000508071 KRTAP13-1Q8IUC0 172 aa10.4□□□□□ -0.74
CLDND1-217ENST00000508071 Q8N8P6 123 aa10.4□□□□□ -0.74
CLDND1-217ENST00000508071 GEMIN7Q9H840 131 aaKnown RBP10.4□□□□□ -0.74
CLDND1-217ENST00000508071 NKAPP1Q8N9T2 125 aa10.39□□□□□ -0.75
CLDND1-217ENST00000508071 IGIPA6NJ69 53 aa10.38□□□□□ -0.75
CLDND1-217ENST00000508071 PNRC1Q12796 327 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-217ENST00000508071 PEA15Q15121 130 aa10.38□□□□□ -0.75
CLDND1-217ENST00000508071 PAPPA-AS1Q5QFB9 102 aa10.38□□□□□ -0.75
CLDND1-217ENST00000508071 CTAG1AP78358 180 aa10.37□□□□□ -0.75
CLDND1-217ENST00000508071 IGLV5-37A0A075B6J1 123 aa10.36□□□□□ -0.75
CLDND1-217ENST00000508071 PPDPFQ9H3Y8 114 aa10.36□□□□□ -0.75
CLDND1-217ENST00000508071 K7EMI3 77 aa10.35□□□□□ -0.75
CLDND1-217ENST00000508071 SRSF3P84103 164 aaKnown RBP10.35□□□□□ -0.75
CLDND1-217ENST00000508071 COX7B2Q8TF08 81 aa10.34□□□□□ -0.75
CLDND1-217ENST00000508071 IGKV2-28A0A075B6P5 120 aa10.33□□□□□ -0.76
CLDND1-217ENST00000508071 SMIM1B2RUZ4 78 aa10.33□□□□□ -0.76
CLDND1-217ENST00000508071 IGKV2D-28P01615 120 aa10.33□□□□□ -0.76
CLDND1-217ENST00000508071 RAB5BP61020 215 aa10.33□□□□□ -0.76
CLDND1-217ENST00000508071 PDZD11Q5EBL8 140 aa10.33□□□□□ -0.76
CLDND1-217ENST00000508071 G0S2P27469 103 aa10.32□□□□□ -0.76
CLDND1-217ENST00000508071 TIMM17AQ99595 171 aa10.32□□□□□ -0.76
CLDND1-217ENST00000508071 PRLHP81277 87 aa10.31□□□□□ -0.76
CLDND1-217ENST00000508071 NXT2Q9NPJ8 142 aaKnown RBP10.31□□□□□ -0.76
CLDND1-217ENST00000508071 SCO1O75880 301 aa10.3□□□□□ -0.76
CLDND1-217ENST00000508071 FAM19A1Q7Z5A9 133 aa10.3□□□□□ -0.76
CLDND1-217ENST00000508071 hCG_2014768A0A024R1R8 64 aa10.29□□□□□ -0.76
CLDND1-217ENST00000508071 TINCRA0A1B0GVN0 87 aa10.28□□□□□ -0.76
CLDND1-217ENST00000508071 LINC01547P58512 204 aaPredicted RBP10.28□□□□□ -0.76
CLDND1-217ENST00000508071 LINC00337Q8N6G1 96 aa10.28□□□□□ -0.76
CLDND1-217ENST00000508071 TOMM6Q96B49 74 aa10.28□□□□□ -0.76
CLDND1-217ENST00000508071 SPAG11AQ6PDA7 123 aa10.27□□□□□ -0.77
CLDND1-217ENST00000508071 C3orf22Q8N5N4 141 aa10.27□□□□□ -0.77
CLDND1-217ENST00000508071 TMEM126AQ9H061 195 aa10.27□□□□□ -0.77
CLDND1-217ENST00000508071 FP248Q71RG6 208 aaPredicted RBP10.26□□□□□ -0.77
CLDND1-217ENST00000508071 ERASQ7Z444 233 aa10.26□□□□□ -0.77
CLDND1-217ENST00000508071 SCGB3A1Q96QR1 104 aa10.26□□□□□ -0.77
CLDND1-217ENST00000508071 IGLV5-45A0A087WSX0 123 aa10.25□□□□□ -0.77
CLDND1-217ENST00000508071 TMEM238C9JI98 176 aa10.25□□□□□ -0.77
CLDND1-217ENST00000508071 ATP5LO75964 103 aa10.25□□□□□ -0.77
CLDND1-217ENST00000508071 SPINK8P0C7L1 97 aa10.25□□□□□ -0.77
CLDND1-217ENST00000508071 PLEKHB2Q96CS7 222 aa10.25□□□□□ -0.77
CLDND1-217ENST00000508071 LCE2DQ5TA82 110 aaPredicted RBP10.24□□□□□ -0.77
CLDND1-217ENST00000508071 CBLN2Q8IUK8 224 aa10.24□□□□□ -0.77
CLDND1-217ENST00000508071 PFN2P35080 140 aa10.23□□□□□ -0.77
CLDND1-217ENST00000508071 GNB1LQ9BYB4 327 aa10.23□□□□□ -0.77
CLDND1-217ENST00000508071 VPREB1P12018 145 aa10.22□□□□□ -0.77
CLDND1-217ENST00000508071 ASB16-AS1Q495Z4 193 aa10.22□□□□□ -0.77
CLDND1-217ENST00000508071 C4orf48Q5BLP8 95 aa10.22□□□□□ -0.77
CLDND1-217ENST00000508071 FSIP2Q5CZC0 6907 aa10.21□□□□□ -0.77
CLDND1-217ENST00000508071 M0R378 163 aa10.21□□□□□ -0.77
CLDND1-217ENST00000508071 ADCYAP1P18509 176 aa10.21□□□□□ -0.77
CLDND1-217ENST00000508071 RPL24P83731 157 aaKnown RBP10.21□□□□□ -0.77
CLDND1-217ENST00000508071 HIGD2AQ9BW72 106 aa10.21□□□□□ -0.77
CLDND1-217ENST00000508071 CST9LQ9H4G1 147 aa10.21□□□□□ -0.77
CLDND1-217ENST00000508071 H3BRM9 83 aa10.2□□□□□ -0.78
CLDND1-217ENST00000508071 MT-ND4LP03901 98 aa10.2□□□□□ -0.78
CLDND1-217ENST00000508071 KRTAP13-3Q3SY46 172 aa10.2□□□□□ -0.78
CLDND1-217ENST00000508071 ANAPC16Q96DE5 110 aa10.2□□□□□ -0.78
CLDND1-217ENST00000508071 MRPL18Q9H0U6 180 aaKnown RBP10.2□□□□□ -0.78
CLDND1-217ENST00000508071 SND1-IT1Q9HBX3 110 aa10.19□□□□□ -0.78
CLDND1-217ENST00000508071 CRCT1Q9UGL9 99 aa10.18□□□□□ -0.78
CLDND1-217ENST00000508071 LINC01549A6NIU2 74 aa10.17□□□□□ -0.78
CLDND1-217ENST00000508071 SEC61BP60468 96 aaKnown RBP10.17□□□□□ -0.78
CLDND1-217ENST00000508071 RAB14P61106 215 aa10.17□□□□□ -0.78
CLDND1-217ENST00000508071 PMVKQ15126 192 aa10.17□□□□□ -0.78
CLDND1-217ENST00000508071 SPRR4Q96PI1 79 aa10.17□□□□□ -0.78
CLDND1-217ENST00000508071 KIAA1644Q3SXP7 199 aa10.16□□□□□ -0.78
CLDND1-217ENST00000508071 ERG28Q9UKR5 140 aa10.16□□□□□ -0.78
CLDND1-217ENST00000508071 KRTAP4-1Q9BYQ7 146 aa10.15□□□□□ -0.78
CLDND1-217ENST00000508071 ZNF706Q9Y5V0 76 aaPredicted RBP10.15□□□□□ -0.78
CLDND1-217ENST00000508071 COX17Q14061 63 aa10.14□□□□□ -0.79
CLDND1-217ENST00000508071 Q8NBF4 154 aa10.14□□□□□ -0.79
CLDND1-217ENST00000508071 DAND5Q8N907 189 aa10.13□□□□□ -0.79
CLDND1-217ENST00000508071 IGLV5-39A0A0G2JS06 123 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms