RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 TRACP01848 142 aa4.95□□□□□ -1.62
CLCN3-206ENST00000507875 CRYGAP11844 174 aa4.95□□□□□ -1.62
CLCN3-206ENST00000507875 MP68P56378 58 aa4.95□□□□□ -1.62
CLCN3-206ENST00000507875 TOMM6Q96B49 74 aa4.95□□□□□ -1.62
CLCN3-206ENST00000507875 DHRS4-AS1Q9P1J3 65 aa4.95□□□□□ -1.62
CLCN3-206ENST00000507875 NOTCH1P46531 2555 aa4.94□□□□□ -1.62
CLCN3-206ENST00000507875 MIFP14174 115 aa4.94□□□□□ -1.62
CLCN3-206ENST00000507875 A0A1W2PPM0 123 aa4.94□□□□□ -1.62
CLCN3-206ENST00000507875 LINC01549A6NIU2 74 aa4.94□□□□□ -1.62
CLCN3-206ENST00000507875 TMEM256-PLSCR3K7ERE1 68 aa4.94□□□□□ -1.62
CLCN3-206ENST00000507875 NANOS2P60321 138 aaKnown RBP4.94□□□□□ -1.62
CLCN3-206ENST00000507875 SCGB3A1Q96QR1 104 aa4.94□□□□□ -1.62
CLCN3-206ENST00000507875 OCR1Q9BZK8 76 aa4.94□□□□□ -1.62
CLCN3-206ENST00000507875 WFDC10AQ9H1F0 79 aa4.94□□□□□ -1.62
CLCN3-206ENST00000507875 TRAV12-1A0A0B4J245 112 aa4.93□□□□□ -1.62
CLCN3-206ENST00000507875 TRBV7-6A0A0J9YX20 115 aa4.93□□□□□ -1.62
CLCN3-206ENST00000507875 KRTAP10-11P60412 298 aa4.93□□□□□ -1.62
CLCN3-206ENST00000507875 ZNF876PQ49A33 203 aa4.93□□□□□ -1.62
CLCN3-206ENST00000507875 C2orf66Q6UXQ4 117 aa4.93□□□□□ -1.62
CLCN3-206ENST00000507875 FP248Q71RG6 208 aaPredicted RBP4.93□□□□□ -1.62
CLCN3-206ENST00000507875 MRPL35Q9NZE8 188 aaKnown RBP4.93□□□□□ -1.62
CLCN3-206ENST00000507875 TRBV6-5A0A0K0K1A5 114 aa4.92□□□□□ -1.62
CLCN3-206ENST00000507875 EPM2AB3EWF7 344 aa4.92□□□□□ -1.62
CLCN3-206ENST00000507875 TCL1BO95988 128 aa4.92□□□□□ -1.62
CLCN3-206ENST00000507875 POLR2KP53803 58 aaKnown RBP4.92□□□□□ -1.62
CLCN3-206ENST00000507875 LINC00612Q8N6U2 182 aa4.92□□□□□ -1.62
CLCN3-206ENST00000507875 IGKV2D-26A0A0A0MRZ7 120 aa4.92□□□□□ -1.62
CLCN3-206ENST00000507875 H3BT86 120 aa4.92□□□□□ -1.62
CLCN3-206ENST00000507875 COX7A2LO14548 114 aa4.92□□□□□ -1.62
CLCN3-206ENST00000507875 PRB2P02812 416 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-206ENST00000507875 SLPIP03973 132 aa4.92□□□□□ -1.62
CLCN3-206ENST00000507875 PLNP26678 52 aa4.92□□□□□ -1.62
CLCN3-206ENST00000507875 FAM74A4Q5TZK3 123 aa4.92□□□□□ -1.62
CLCN3-206ENST00000507875 LAMTOR3Q9UHA4 124 aa4.92□□□□□ -1.62
CLCN3-206ENST00000507875 F8VRH5 84 aa4.91□□□□□ -1.62
CLCN3-206ENST00000507875 H3BRM9 83 aa4.91□□□□□ -1.62
CLCN3-206ENST00000507875 DEFB121Q5J5C9 76 aa4.91□□□□□ -1.62
CLCN3-206ENST00000507875 TRBV27A0A0K0K1C4 114 aa4.91□□□□□ -1.62
CLCN3-206ENST00000507875 SDHAF1A6NFY7 115 aa4.91□□□□□ -1.62
CLCN3-206ENST00000507875 M0QY20 66 aa4.91□□□□□ -1.62
CLCN3-206ENST00000507875 SEC11AP67812 179 aa4.91□□□□□ -1.62
CLCN3-206ENST00000507875 ZNF56Q15929 161 aa4.91□□□□□ -1.62
CLCN3-206ENST00000507875 CMYA5Q8N3K9 4069 aa4.91□□□□□ -1.62
CLCN3-206ENST00000507875 IGLV4-3A0A075B6K6 122 aa4.9□□□□□ -1.62
CLCN3-206ENST00000507875 TRBV10-1A0A0K0K1A3 114 aa4.9□□□□□ -1.62
CLCN3-206ENST00000507875 HTN1P15515 57 aa4.9□□□□□ -1.62
CLCN3-206ENST00000507875 CFAP126Q5VTH2 177 aa4.9□□□□□ -1.62
CLCN3-206ENST00000507875 NOTCH2NLQ7Z3S9 236 aa4.9□□□□□ -1.62
CLCN3-206ENST00000507875 Q8NBF4 154 aa4.9□□□□□ -1.62
CLCN3-206ENST00000507875 IGHV1-58A0A0C4DH39 117 aa4.9□□□□□ -1.63
CLCN3-206ENST00000507875 IGHV3-53P01767 116 aa4.9□□□□□ -1.63
CLCN3-206ENST00000507875 VSIG2Q96IQ7 327 aa4.9□□□□□ -1.63
CLCN3-206ENST00000507875 CYSTM1Q9H1C7 97 aa4.9□□□□□ -1.63
CLCN3-206ENST00000507875 NOTCH3Q9UM47 2321 aa4.9□□□□□ -1.63
CLCN3-206ENST00000507875 TGP01266 2768 aa4.9□□□□□ -1.63
CLCN3-206ENST00000507875 IGHV6-1A0A0B4J1U7 121 aa4.89□□□□□ -1.63
CLCN3-206ENST00000507875 hADV29S1A0JD25 119 aa4.89□□□□□ -1.63
CLCN3-206ENST00000507875 IGIPA6NJ69 53 aa4.89□□□□□ -1.63
CLCN3-206ENST00000507875 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
CLCN3-206ENST00000507875 TMEM243Q9BU79 118 aa4.89□□□□□ -1.63
CLCN3-206ENST00000507875 TTTY13Q9BZ97 58 aa4.89□□□□□ -1.63
CLCN3-206ENST00000507875 IMUPQ9GZP8 106 aa4.89□□□□□ -1.63
CLCN3-206ENST00000507875 HIGD1BQ9P298 99 aa4.89□□□□□ -1.63
CLCN3-206ENST00000507875 NACAE9PAV3 2078 aa4.89□□□□□ -1.63
CLCN3-206ENST00000507875 TEN1Q86WV5 123 aa4.89□□□□□ -1.63
CLCN3-206ENST00000507875 ATP6V0E2Q8NHE4 81 aa4.89□□□□□ -1.63
CLCN3-206ENST00000507875 DEFB104AQ8WTQ1 72 aa4.89□□□□□ -1.63
CLCN3-206ENST00000507875 TRBV25-1A0A075B6N4 114 aa4.88□□□□□ -1.63
CLCN3-206ENST00000507875 TRGV1A0A0A0MS02 117 aa4.88□□□□□ -1.63
CLCN3-206ENST00000507875 TRBV6-4A0A1B0GX49 114 aa4.88□□□□□ -1.63
CLCN3-206ENST00000507875 K7EIL1 84 aa4.88□□□□□ -1.63
CLCN3-206ENST00000507875 PRM2P04554 102 aa4.88□□□□□ -1.63
CLCN3-206ENST00000507875 RPL39P62891 51 aaKnown RBP4.88□□□□□ -1.63
CLCN3-206ENST00000507875 KIAA0087Q14695 138 aa4.88□□□□□ -1.63
CLCN3-206ENST00000507875 TMEM141Q96I45 108 aa4.88□□□□□ -1.63
CLCN3-206ENST00000507875 SPART-AS1P0CW21 52 aa4.88□□□□□ -1.63
CLCN3-206ENST00000507875 RHOHQ15669 191 aa4.88□□□□□ -1.63
CLCN3-206ENST00000507875 DEFB135Q30KP9 77 aa4.88□□□□□ -1.63
CLCN3-206ENST00000507875 Q8NAQ8 132 aa4.88□□□□□ -1.63
CLCN3-206ENST00000507875 NOP10Q9NPE3 64 aaKnown RBP4.88□□□□□ -1.63
CLCN3-206ENST00000507875 I3L3M4 83 aa4.87□□□□□ -1.63
CLCN3-206ENST00000507875 COX7CP15954 63 aa4.87□□□□□ -1.63
CLCN3-206ENST00000507875 CHAC1Q9BUX1 264 aa4.87□□□□□ -1.63
CLCN3-206ENST00000507875 LGALS3P17931 250 aaKnown RBP4.87□□□□□ -1.63
CLCN3-206ENST00000507875 Q6ZTI0 123 aa4.87□□□□□ -1.63
CLCN3-206ENST00000507875 B9D2Q9BPU9 175 aa4.87□□□□□ -1.63
CLCN3-206ENST00000507875 IGLV4-69A0A075B6H9 119 aa4.86□□□□□ -1.63
CLCN3-206ENST00000507875 TRGV2A0A075B6R0 118 aa4.86□□□□□ -1.63
CLCN3-206ENST00000507875 IGHV3-73A0A0B4J1V6 119 aa4.86□□□□□ -1.63
CLCN3-206ENST00000507875 LCA10Q71F78 164 aa4.86□□□□□ -1.63
CLCN3-206ENST00000507875 IGHV3OR16-9A0A0B4J2B5 98 aa4.86□□□□□ -1.63
CLCN3-206ENST00000507875 MYMXA0A1B0GTQ4 84 aa4.86□□□□□ -1.63
CLCN3-206ENST00000507875 IGLL5B9A064 214 aa4.86□□□□□ -1.63
CLCN3-206ENST00000507875 NDUFC2-KCTD14E9PQ53 114 aa4.86□□□□□ -1.63
CLCN3-206ENST00000507875 UBE2L6O14933 153 aa4.86□□□□□ -1.63
CLCN3-206ENST00000507875 RPL36AP83881 106 aaKnown RBP4.86□□□□□ -1.63
CLCN3-206ENST00000507875 C20orf203Q8NBC4 194 aa4.86□□□□□ -1.63
CLCN3-206ENST00000507875 PRKDCP78527 4128 aaKnown RBP4.85□□□□□ -1.63
CLCN3-206ENST00000507875 C11orf86A6NJI1 115 aa4.85□□□□□ -1.63
CLCN3-206ENST00000507875 H3BNG1 76 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms