RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 IGLC3P0DOY3 106 aa17.58■□□□□ 0.4
MSX2-202ENST00000507785 RPL18AQ02543 176 aaKnown RBP17.58■□□□□ 0.4
MSX2-202ENST00000507785 TOMM7Q9P0U1 55 aa17.58■□□□□ 0.4
MSX2-202ENST00000507785 TRBV30A0A0K0K1B3 111 aa17.57■□□□□ 0.4
MSX2-202ENST00000507785 PRSS2P07478 247 aa17.57■□□□□ 0.4
MSX2-202ENST00000507785 BAGE3Q86Y29 109 aa17.57■□□□□ 0.4
MSX2-202ENST00000507785 SCO1O75880 301 aa17.56■□□□□ 0.4
MSX2-202ENST00000507785 NDUFA6P56556 154 aa17.56■□□□□ 0.4
MSX2-202ENST00000507785 C6orf226Q5I0X4 101 aa17.55■□□□□ 0.4
MSX2-202ENST00000507785 LINC00310P59036 64 aa17.54■□□□□ 0.4
MSX2-202ENST00000507785 Q6ZRP5 223 aa17.54■□□□□ 0.4
MSX2-202ENST00000507785 A0A1W2PNN7 141 aa17.53■□□□□ 0.4
MSX2-202ENST00000507785 CKS1BP61024 79 aa17.53■□□□□ 0.4
MSX2-202ENST00000507785 HSBP1O75506 76 aa17.52■□□□□ 0.4
MSX2-202ENST00000507785 SPINK8P0C7L1 97 aa17.51■□□□□ 0.39
MSX2-202ENST00000507785 C9orf116Q5BN46 136 aaPredicted RBP17.51■□□□□ 0.39
MSX2-202ENST00000507785 C7orf33Q8WU49 177 aa17.51■□□□□ 0.39
MSX2-202ENST00000507785 ZNF22P17026 224 aaPredicted RBP17.5■□□□□ 0.39
MSX2-202ENST00000507785 FAM19A2Q8N3H0 131 aa17.5■□□□□ 0.39
MSX2-202ENST00000507785 IFI27L1Q96BM0 104 aa17.5■□□□□ 0.39
MSX2-202ENST00000507785 NDUFC2-KCTD14E9PQ53 114 aa17.49■□□□□ 0.39
MSX2-202ENST00000507785 H3BRM9 83 aa17.49■□□□□ 0.39
MSX2-202ENST00000507785 SERF1AO75920 110 aa17.49■□□□□ 0.39
MSX2-202ENST00000507785 COX7B2Q8TF08 81 aa17.49■□□□□ 0.39
MSX2-202ENST00000507785 LRP1Q07954 4544 aaKnown RBP17.49■□□□□ 0.39
MSX2-202ENST00000507785 FAT3Q8TDW7 4589 aa17.48■□□□□ 0.39
MSX2-202ENST00000507785 CXCL5P42830 114 aa17.48■□□□□ 0.39
MSX2-202ENST00000507785 F8VRH5 84 aa17.47■□□□□ 0.39
MSX2-202ENST00000507785 HNRNPA3P51991 378 aaKnown RBP17.47■□□□□ 0.39
MSX2-202ENST00000507785 C11orf86A6NJI1 115 aa17.46■□□□□ 0.39
MSX2-202ENST00000507785 GAGE2EQ4V326 116 aa17.46■□□□□ 0.39
MSX2-202ENST00000507785 GAGE2DQ9UEU5 116 aa17.46■□□□□ 0.39
MSX2-202ENST00000507785 DMBT1Q9UGM3 2413 aaPredicted RBP17.45■□□□□ 0.38
MSX2-202ENST00000507785 TRAV12-1A0A0B4J245 112 aa17.45■□□□□ 0.38
MSX2-202ENST00000507785 IGLV5-39A0A0G2JS06 123 aa17.45■□□□□ 0.38
MSX2-202ENST00000507785 NUPR1O60356 82 aa17.44■□□□□ 0.38
MSX2-202ENST00000507785 CHTOPQ9Y3Y2 248 aaKnown RBP17.44■□□□□ 0.38
MSX2-202ENST00000507785 FAM168BA1KXE4 195 aa17.41■□□□□ 0.38
MSX2-202ENST00000507785 PRR3P79522 188 aaKnown RBP17.4■□□□□ 0.38
MSX2-202ENST00000507785 C9orf129Q5T035 196 aaKnown RBP17.4■□□□□ 0.38
MSX2-202ENST00000507785 KRTAP7-1Q8IUC3 87 aa17.4■□□□□ 0.38
MSX2-202ENST00000507785 LEPROTL1O95214 131 aa17.38■□□□□ 0.37
MSX2-202ENST00000507785 HERC1Q15751 4861 aa17.38■□□□□ 0.37
MSX2-202ENST00000507785 HIST1H2BKO60814 126 aa17.37■□□□□ 0.37
MSX2-202ENST00000507785 HIST1H2BJP06899 126 aa17.37■□□□□ 0.37
MSX2-202ENST00000507785 HIST1H2BOP23527 126 aa17.37■□□□□ 0.37
MSX2-202ENST00000507785 HIST1H2BBP33778 126 aa17.37■□□□□ 0.37
MSX2-202ENST00000507785 HIST1H2BDP58876 126 aa17.37■□□□□ 0.37
MSX2-202ENST00000507785 HIST1H2BCP62807 126 aa17.37■□□□□ 0.37
MSX2-202ENST00000507785 HIST2H2BEQ16778 126 aa17.37■□□□□ 0.37
MSX2-202ENST00000507785 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.37■□□□□ 0.37
MSX2-202ENST00000507785 TMEM170BQ5T4T1 132 aa17.37■□□□□ 0.37
MSX2-202ENST00000507785 PHF5AQ7RTV0 110 aaKnown RBP17.37■□□□□ 0.37
MSX2-202ENST00000507785 HIST1H2BHQ93079 126 aa17.37■□□□□ 0.37
MSX2-202ENST00000507785 HIST1H2BNQ99877 126 aa17.37■□□□□ 0.37
MSX2-202ENST00000507785 HIST1H2BMQ99879 126 aa17.37■□□□□ 0.37
MSX2-202ENST00000507785 FAM19A5Q7Z5A7 132 aaPredicted RBP17.34■□□□□ 0.37
MSX2-202ENST00000507785 KRTAP29-1A8MX34 341 aaPredicted RBP17.33■□□□□ 0.36
MSX2-202ENST00000507785 ODF1Q14990 250 aa17.33■□□□□ 0.36
MSX2-202ENST00000507785 TMEM223A0PJW6 202 aa17.31■□□□□ 0.36
MSX2-202ENST00000507785 XAGE1AQ9HD64 81 aa17.31■□□□□ 0.36
MSX2-202ENST00000507785 HSPB8Q9UJY1 196 aa17.31■□□□□ 0.36
MSX2-202ENST00000507785 FABP4P15090 132 aa17.3■□□□□ 0.36
MSX2-202ENST00000507785 H0Y8G0 127 aa17.28■□□□□ 0.36
MSX2-202ENST00000507785 M0QXV9 152 aa17.27■□□□□ 0.36
MSX2-202ENST00000507785 SERTAD4-AS1Q5TG53 156 aa17.27■□□□□ 0.36
MSX2-202ENST00000507785 PSORS1C2Q9UIG4 136 aa17.27■□□□□ 0.36
MSX2-202ENST00000507785 KRTAP11-1Q8IUC1 163 aa17.26■□□□□ 0.35
MSX2-202ENST00000507785 ZNF625Q96I27 306 aaPredicted RBP17.26■□□□□ 0.35
MSX2-202ENST00000507785 OXTP01178 125 aa17.25■□□□□ 0.35
MSX2-202ENST00000507785 SFTA2Q6UW10 78 aa17.23■□□□□ 0.35
MSX2-202ENST00000507785 S100A1P23297 94 aa17.22■□□□□ 0.35
MSX2-202ENST00000507785 J3QL48 77 aa17.21■□□□□ 0.35
MSX2-202ENST00000507785 SRSF9Q13242 221 aaKnown RBP eCLIP17.21■□□□□ 0.35
MSX2-202ENST00000507785 ERG28Q9UKR5 140 aa17.21■□□□□ 0.35
MSX2-202ENST00000507785 PLNP26678 52 aa17.2■□□□□ 0.34
MSX2-202ENST00000507785 COA6Q5JTJ3 125 aaKnown RBP17.2■□□□□ 0.34
MSX2-202ENST00000507785 C22orf24Q9Y442 160 aa17.2■□□□□ 0.34
MSX2-202ENST00000507785 ATP6V1G1O75348 118 aa17.19■□□□□ 0.34
MSX2-202ENST00000507785 PFN2P35080 140 aa17.19■□□□□ 0.34
MSX2-202ENST00000507785 PLA2G2DQ9UNK4 145 aa17.19■□□□□ 0.34
MSX2-202ENST00000507785 COX17Q14061 63 aa17.18■□□□□ 0.34
MSX2-202ENST00000507785 SPINK6Q6UWN8 80 aa17.18■□□□□ 0.34
MSX2-202ENST00000507785 PMCHL2Q9BQD1 86 aa17.18■□□□□ 0.34
MSX2-202ENST00000507785 MAP1LC3CQ9BXW4 147 aa17.18■□□□□ 0.34
MSX2-202ENST00000507785 DPM2O94777 84 aa17.17■□□□□ 0.34
MSX2-202ENST00000507785 C1orf137Q5JT78 98 aa17.17■□□□□ 0.34
MSX2-202ENST00000507785 TP73-AS1Q9UF72 201 aa17.17■□□□□ 0.34
MSX2-202ENST00000507785 UBE2BP63146 152 aa17.15■□□□□ 0.34
MSX2-202ENST00000507785 TNXBP22105 4242 aa17.15■□□□□ 0.34
MSX2-202ENST00000507785 SND1-IT1Q9HBX3 110 aa17.14■□□□□ 0.33
MSX2-202ENST00000507785 IGKCP01834 107 aa17.13■□□□□ 0.33
MSX2-202ENST00000507785 IGLV5-37A0A075B6J1 123 aa17.12■□□□□ 0.33
MSX2-202ENST00000507785 LBHQ53QV2 105 aaPredicted RBP17.12■□□□□ 0.33
MSX2-202ENST00000507785 SYS1-DBNDD2H3BUS1 97 aa17.11■□□□□ 0.33
MSX2-202ENST00000507785 MRPL55Q7Z7F7 128 aaKnown RBP17.11■□□□□ 0.33
MSX2-202ENST00000507785 IGLV7-43P04211 117 aa17.1■□□□□ 0.33
MSX2-202ENST00000507785 TSPEAR-AS2P59090 65 aa17.1■□□□□ 0.33
MSX2-202ENST00000507785 LEPROTO15243 131 aa17.09■□□□□ 0.33
MSX2-202ENST00000507785 NDUFA12Q9UI09 145 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms