RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 ZCCHC23Q6ZST2 131 aa1.26□□□□□ -2.21
SPCS3-202ENST00000507001 CLEC2BQ92478 149 aa1.26□□□□□ -2.21
SPCS3-202ENST00000507001 NABP2Q9BQ15 211 aa1.26□□□□□ -2.21
SPCS3-202ENST00000507001 ARL2-SNX15V9GYD0 113 aa1.26□□□□□ -2.21
SPCS3-202ENST00000507001 LAMA4Q16363 1823 aa1.26□□□□□ -2.21
SPCS3-202ENST00000507001 ZNF236Q9UL36 1845 aa1.26□□□□□ -2.21
SPCS3-202ENST00000507001 UBR3Q6ZT12 1888 aa1.25□□□□□ -2.21
SPCS3-202ENST00000507001 TRBV25-1A0A075B6N4 114 aa1.25□□□□□ -2.21
SPCS3-202ENST00000507001 TRAV23DV6A0A075B6W5 121 aa1.25□□□□□ -2.21
SPCS3-202ENST00000507001 IGLV3-32A0A0A0MS00 114 aa1.25□□□□□ -2.21
SPCS3-202ENST00000507001 A0A1B0GWA3 101 aa1.25□□□□□ -2.21
SPCS3-202ENST00000507001 JMJD7-PLA2G4BH0Y9G9 81 aa1.25□□□□□ -2.21
SPCS3-202ENST00000507001 LEPROTL1O95214 131 aa1.25□□□□□ -2.21
SPCS3-202ENST00000507001 TMEM141Q96I45 108 aa1.25□□□□□ -2.21
SPCS3-202ENST00000507001 SMIM7Q9BQ49 75 aa1.25□□□□□ -2.21
SPCS3-202ENST00000507001 SNRNP200O75643 2136 aaKnown RBP1.25□□□□□ -2.21
SPCS3-202ENST00000507001 KIAA1549LQ6ZVL6 1849 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.24□□□□□ -2.21
SPCS3-202ENST00000507001 PRH1P02810 166 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 COX6CP09669 75 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 IFI27P40305 119 aaPredicted RBP1.24□□□□□ -2.21
SPCS3-202ENST00000507001 SERF2P84101 59 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 RBM3P98179 157 aaKnown RBP1.24□□□□□ -2.21
SPCS3-202ENST00000507001 PLGLAQ15195 96 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 ATXN8Q156A1 80 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 ZNF56Q15929 161 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 S100A7L2Q5SY68 101 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 NCBP2-AS2Q69YL0 99 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 LIMD2Q9BT23 127 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 PRO1854Q9UHT4 67 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 UBE2D4Q9Y2X8 147 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 HILPDAQ9Y5L2 63 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 TANC2Q9HCD6 1990 aa1.24□□□□□ -2.21
SPCS3-202ENST00000507001 TRBV30A0A0K0K1B3 111 aa1.23□□□□□ -2.21
SPCS3-202ENST00000507001 LOC101927531A0A1B0GV80 90 aa1.23□□□□□ -2.21
SPCS3-202ENST00000507001 CEBPZOSA8MTT3 80 aa1.23□□□□□ -2.21
SPCS3-202ENST00000507001 IFI6P09912 130 aa1.23□□□□□ -2.21
SPCS3-202ENST00000507001 C9orf116Q5BN46 136 aaPredicted RBP1.23□□□□□ -2.21
SPCS3-202ENST00000507001 Q8N6K4 173 aa1.23□□□□□ -2.21
SPCS3-202ENST00000507001 FAM103A1Q9BTL3 118 aaKnown RBP1.23□□□□□ -2.21
SPCS3-202ENST00000507001 LINC00474Q9P2X8 69 aa1.23□□□□□ -2.21
SPCS3-202ENST00000507001 NDUFA12Q9UI09 145 aa1.23□□□□□ -2.21
SPCS3-202ENST00000507001 PLXNB2O15031 1838 aa1.23□□□□□ -2.21
SPCS3-202ENST00000507001 MUC22E2RYF6 1773 aaPredicted RBP1.23□□□□□ -2.21
SPCS3-202ENST00000507001 MYO7AQ13402 2215 aa1.22□□□□□ -2.21
SPCS3-202ENST00000507001 LOC107984156A0A0G2JMH3 177 aa1.22□□□□□ -2.21
SPCS3-202ENST00000507001 TRBV7-4A0A0J9YYF1 115 aa1.22□□□□□ -2.21
SPCS3-202ENST00000507001 SMIM27A0A1W2PRY6 76 aa1.22□□□□□ -2.21
SPCS3-202ENST00000507001 IQCF6A8MYZ5 107 aa1.22□□□□□ -2.21
SPCS3-202ENST00000507001 HMGA1P17096 107 aaKnown RBP1.22□□□□□ -2.21
SPCS3-202ENST00000507001 Q5VV11 94 aa1.22□□□□□ -2.21
SPCS3-202ENST00000507001 ZNF818PQ6ZRF7 136 aa1.22□□□□□ -2.21
SPCS3-202ENST00000507001 ARL17AQ8IVW1 177 aa1.22□□□□□ -2.21
SPCS3-202ENST00000507001 FAM223AQ8IWN6 122 aa1.22□□□□□ -2.21
SPCS3-202ENST00000507001 C20orf197Q8N268 126 aa1.22□□□□□ -2.21
SPCS3-202ENST00000507001 GNG13Q9P2W3 67 aa1.22□□□□□ -2.21
SPCS3-202ENST00000507001 MUC4Q99102 2169 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 TRAV22A0A0B4J277 110 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 TEX49A0A1B0GTD5 131 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 TMEM30CPA0ZSE6 113 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 LINC01546A6NGU7 62 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 TMEM14DPA8MWL7 114 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 HCG22E2RYF7 251 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 F8WEM9 126 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 IGHV3-33P01772 117 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 SAA2P0DJI9 122 aaPredicted RBP1.21□□□□□ -2.22
SPCS3-202ENST00000507001 ELOF1P60002 83 aaKnown RBP1.21□□□□□ -2.22
SPCS3-202ENST00000507001 CASC2Q6XLA1 102 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 AMELXQ99217 191 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 CDC42SE2Q9NRR3 84 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 V9GYV3 84 aa1.21□□□□□ -2.22
SPCS3-202ENST00000507001 EML5Q05BV3 1969 aa1.2□□□□□ -2.22
SPCS3-202ENST00000507001 CTXND1A0A1B0GTU2 59 aa1.2□□□□□ -2.22
SPCS3-202ENST00000507001 LINC01549A6NIU2 74 aa1.2□□□□□ -2.22
SPCS3-202ENST00000507001 FAM223BA6NKX1 122 aa1.2□□□□□ -2.22
SPCS3-202ENST00000507001 IGLV3-1P01715 115 aa1.2□□□□□ -2.22
SPCS3-202ENST00000507001 CAV3P56539 151 aa1.2□□□□□ -2.22
SPCS3-202ENST00000507001 EDDM3BP56851 147 aa1.2□□□□□ -2.22
SPCS3-202ENST00000507001 PRB3Q04118 309 aaPredicted RBP1.2□□□□□ -2.22
SPCS3-202ENST00000507001 Q86TA4 180 aa1.2□□□□□ -2.22
SPCS3-202ENST00000507001 TET1Q8NFU7 2136 aa1.2□□□□□ -2.22
SPCS3-202ENST00000507001 BPESC1Q9GZL8 116 aa1.2□□□□□ -2.22
SPCS3-202ENST00000507001 LCE6AA0A183 80 aa1.19□□□□□ -2.22
SPCS3-202ENST00000507001 CXorf51AA0A1B0GTR3 108 aa1.19□□□□□ -2.22
SPCS3-202ENST00000507001 A6NIN4 97 aa1.19□□□□□ -2.22
SPCS3-202ENST00000507001 ZNF815PA8K554 130 aa1.19□□□□□ -2.22
SPCS3-202ENST00000507001 HIGD1CA8MV81 97 aa1.19□□□□□ -2.22
SPCS3-202ENST00000507001 PLNP26678 52 aa1.19□□□□□ -2.22
SPCS3-202ENST00000507001 TMEM14BQ9NUH8 114 aa1.19□□□□□ -2.22
SPCS3-202ENST00000507001 LENEPQ9Y5L5 61 aa1.19□□□□□ -2.22
SPCS3-202ENST00000507001 TNRC6CQ9HCJ0 1690 aaKnown RBP1.19□□□□□ -2.22
SPCS3-202ENST00000507001 H3BVH4 76 aa1.18□□□□□ -2.22
SPCS3-202ENST00000507001 PPP1R17O96001 155 aa1.18□□□□□ -2.22
SPCS3-202ENST00000507001 COX6B1P14854 86 aa1.18□□□□□ -2.22
SPCS3-202ENST00000507001 FXYD4P59646 89 aa1.18□□□□□ -2.22
SPCS3-202ENST00000507001 FAM74A4Q5TZK3 123 aa1.18□□□□□ -2.22
SPCS3-202ENST00000507001 PROK2Q9HC23 129 aa1.18□□□□□ -2.22
SPCS3-202ENST00000507001 ZNF831Q5JPB2 1677 aa1.18□□□□□ -2.22
SPCS3-202ENST00000507001 MED12Q93074 2177 aa1.18□□□□□ -2.22
SPCS3-202ENST00000507001 TRBV10-1A0A0K0K1A3 114 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms