RNA–Protein interactions for RNA: ENST00000506958.5

APBB3-213, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 3

Gene APBB3, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-213ENST00000506958 CHCHD1Q96BP2 118 aaKnown RBP13.5□□□□□ -0.25
APBB3-213ENST00000506958 CXCL5P42830 114 aa13.49□□□□□ -0.25
APBB3-213ENST00000506958 C2orf82Q6UX34 121 aa13.49□□□□□ -0.25
APBB3-213ENST00000506958 H3BRM9 83 aa13.48□□□□□ -0.25
APBB3-213ENST00000506958 PDZD11Q5EBL8 140 aa13.48□□□□□ -0.25
APBB3-213ENST00000506958 NDUFA6P56556 154 aa13.47□□□□□ -0.25
APBB3-213ENST00000506958 SMIM1B2RUZ4 78 aa13.46□□□□□ -0.25
APBB3-213ENST00000506958 NDUFC2-KCTD14E9PQ53 114 aa13.46□□□□□ -0.25
APBB3-213ENST00000506958 PMCHL1Q16048 86 aa13.46□□□□□ -0.25
APBB3-213ENST00000506958 C9orf116Q5BN46 136 aaPredicted RBP13.46□□□□□ -0.25
APBB3-213ENST00000506958 J3QL48 77 aa13.45□□□□□ -0.26
APBB3-213ENST00000506958 Q6ZRP5 223 aa13.45□□□□□ -0.26
APBB3-213ENST00000506958 KRTAP29-1A8MX34 341 aaPredicted RBP13.44□□□□□ -0.26
APBB3-213ENST00000506958 F8VRH5 84 aa13.44□□□□□ -0.26
APBB3-213ENST00000506958 IGLC3P0DOY3 106 aa13.44□□□□□ -0.26
APBB3-213ENST00000506958 MYCBP2O75592 4640 aa13.43□□□□□ -0.26
APBB3-213ENST00000506958 PRR3P79522 188 aaKnown RBP13.43□□□□□ -0.26
APBB3-213ENST00000506958 GAGE2EQ4V326 116 aa13.43□□□□□ -0.26
APBB3-213ENST00000506958 BAGE3Q86Y29 109 aa13.43□□□□□ -0.26
APBB3-213ENST00000506958 COX7B2Q8TF08 81 aa13.43□□□□□ -0.26
APBB3-213ENST00000506958 GAGE2DQ9UEU5 116 aa13.43□□□□□ -0.26
APBB3-213ENST00000506958 A0A1W2PNN7 141 aa13.42□□□□□ -0.26
APBB3-213ENST00000506958 OXTP01178 125 aa13.42□□□□□ -0.26
APBB3-213ENST00000506958 TRGC2P03986 189 aa13.42□□□□□ -0.26
APBB3-213ENST00000506958 HSBP1O75506 76 aa13.41□□□□□ -0.26
APBB3-213ENST00000506958 SPINK8P0C7L1 97 aa13.4□□□□□ -0.26
APBB3-213ENST00000506958 HNRNPA3P51991 378 aaKnown RBP13.39□□□□□ -0.27
APBB3-213ENST00000506958 IFI27L1Q96BM0 104 aa13.37□□□□□ -0.27
APBB3-213ENST00000506958 ZNF22P17026 224 aaPredicted RBP13.36□□□□□ -0.27
APBB3-213ENST00000506958 FAM19A5Q7Z5A7 132 aaPredicted RBP13.36□□□□□ -0.27
APBB3-213ENST00000506958 TRAV12-1A0A0B4J245 112 aa13.35□□□□□ -0.27
APBB3-213ENST00000506958 COLCA2A8K830 154 aa13.35□□□□□ -0.27
APBB3-213ENST00000506958 CHTOPQ9Y3Y2 248 aaKnown RBP13.35□□□□□ -0.27
APBB3-213ENST00000506958 IGLV5-39A0A0G2JS06 123 aa13.34□□□□□ -0.27
APBB3-213ENST00000506958 PHF5AQ7RTV0 110 aaKnown RBP13.34□□□□□ -0.27
APBB3-213ENST00000506958 FAM168BA1KXE4 195 aa13.33□□□□□ -0.28
APBB3-213ENST00000506958 C11orf86A6NJI1 115 aa13.33□□□□□ -0.28
APBB3-213ENST00000506958 TMEM170BQ5T4T1 132 aa13.33□□□□□ -0.28
APBB3-213ENST00000506958 M0QXV9 152 aa13.32□□□□□ -0.28
APBB3-213ENST00000506958 C9orf129Q5T035 196 aaKnown RBP13.32□□□□□ -0.28
APBB3-213ENST00000506958 SFTA2Q6UW10 78 aa13.32□□□□□ -0.28
APBB3-213ENST00000506958 SERF1AO75920 110 aa13.31□□□□□ -0.28
APBB3-213ENST00000506958 SPINK6Q6UWN8 80 aa13.3□□□□□ -0.28
APBB3-213ENST00000506958 FAM19A2Q8N3H0 131 aa13.3□□□□□ -0.28
APBB3-213ENST00000506958 ODF1Q14990 250 aa13.29□□□□□ -0.28
APBB3-213ENST00000506958 PSORS1C2Q9UIG4 136 aa13.29□□□□□ -0.28
APBB3-213ENST00000506958 LEPROTL1O95214 131 aa13.28□□□□□ -0.28
APBB3-213ENST00000506958 UBE2BP63146 152 aa13.28□□□□□ -0.28
APBB3-213ENST00000506958 XAGE1AQ9HD64 81 aa13.28□□□□□ -0.28
APBB3-213ENST00000506958 HSPB8Q9UJY1 196 aa13.27□□□□□ -0.29
APBB3-213ENST00000506958 C1orf137Q5JT78 98 aa13.26□□□□□ -0.29
APBB3-213ENST00000506958 PKHD1L1Q86WI1 4243 aa13.26□□□□□ -0.29
APBB3-213ENST00000506958 LINC00310P59036 64 aa13.25□□□□□ -0.29
APBB3-213ENST00000506958 LBHQ53QV2 105 aaPredicted RBP13.25□□□□□ -0.29
APBB3-213ENST00000506958 REG3GQ6UW15 175 aa13.25□□□□□ -0.29
APBB3-213ENST00000506958 KRTAP7-1Q8IUC3 87 aa13.25□□□□□ -0.29
APBB3-213ENST00000506958 SCO1O75880 301 aa13.23□□□□□ -0.29
APBB3-213ENST00000506958 TP73-AS1Q9UF72 201 aa13.23□□□□□ -0.29
APBB3-213ENST00000506958 TMEM223A0PJW6 202 aa13.22□□□□□ -0.29
APBB3-213ENST00000506958 SRSF9Q13242 221 aaKnown RBP eCLIP13.22□□□□□ -0.29
APBB3-213ENST00000506958 COX17Q14061 63 aa13.22□□□□□ -0.29
APBB3-213ENST00000506958 SERTAD4-AS1Q5TG53 156 aa13.22□□□□□ -0.29
APBB3-213ENST00000506958 HERC1Q15751 4861 aa13.22□□□□□ -0.29
APBB3-213ENST00000506958 H0Y8G0 127 aa13.21□□□□□ -0.29
APBB3-213ENST00000506958 ERG28Q9UKR5 140 aa13.21□□□□□ -0.29
APBB3-213ENST00000506958 PLA2G2DQ9UNK4 145 aa13.21□□□□□ -0.29
APBB3-213ENST00000506958 C22orf24Q9Y442 160 aa13.21□□□□□ -0.29
APBB3-213ENST00000506958 LRP1Q07954 4544 aaKnown RBP13.2□□□□□ -0.3
APBB3-213ENST00000506958 PLNP26678 52 aa13.2□□□□□ -0.3
APBB3-213ENST00000506958 PFN2P35080 140 aa13.2□□□□□ -0.3
APBB3-213ENST00000506958 IGLV7-43P04211 117 aa13.19□□□□□ -0.3
APBB3-213ENST00000506958 FABP4P15090 132 aa13.18□□□□□ -0.3
APBB3-213ENST00000506958 MRPL55Q7Z7F7 128 aaKnown RBP13.18□□□□□ -0.3
APBB3-213ENST00000506958 ZNF625Q96I27 306 aaPredicted RBP13.18□□□□□ -0.3
APBB3-213ENST00000506958 NUPR1O60356 82 aa13.17□□□□□ -0.3
APBB3-213ENST00000506958 HIST1H2BKO60814 126 aa13.17□□□□□ -0.3
APBB3-213ENST00000506958 HIST1H2BJP06899 126 aa13.17□□□□□ -0.3
APBB3-213ENST00000506958 HIST1H2BOP23527 126 aa13.17□□□□□ -0.3
APBB3-213ENST00000506958 HIST1H2BBP33778 126 aa13.17□□□□□ -0.3
APBB3-213ENST00000506958 HIST1H2BDP58876 126 aa13.17□□□□□ -0.3
APBB3-213ENST00000506958 HIST1H2BCP62807 126 aa13.17□□□□□ -0.3
APBB3-213ENST00000506958 HIST2H2BEQ16778 126 aa13.17□□□□□ -0.3
APBB3-213ENST00000506958 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.17□□□□□ -0.3
APBB3-213ENST00000506958 NKAPP1Q8N9T2 125 aa13.17□□□□□ -0.3
APBB3-213ENST00000506958 HIST1H2BHQ93079 126 aa13.17□□□□□ -0.3
APBB3-213ENST00000506958 HIST1H2BNQ99877 126 aa13.17□□□□□ -0.3
APBB3-213ENST00000506958 HIST1H2BMQ99879 126 aa13.17□□□□□ -0.3
APBB3-213ENST00000506958 FAT3Q8TDW7 4589 aa13.16□□□□□ -0.3
APBB3-213ENST00000506958 KRTAP11-1Q8IUC1 163 aa13.16□□□□□ -0.3
APBB3-213ENST00000506958 DIRC1Q969H9 104 aa13.16□□□□□ -0.3
APBB3-213ENST00000506958 LINC01600Q96MT4 127 aa13.16□□□□□ -0.3
APBB3-213ENST00000506958 IGLV5-37A0A075B6J1 123 aa13.15□□□□□ -0.3
APBB3-213ENST00000506958 MAP1LC3CQ9BXW4 147 aa13.15□□□□□ -0.3
APBB3-213ENST00000506958 DPM2O94777 84 aa13.14□□□□□ -0.31
APBB3-213ENST00000506958 MT1HL1P0DM35 61 aa13.13□□□□□ -0.31
APBB3-213ENST00000506958 HERVK_113P61574 105 aa13.13□□□□□ -0.31
APBB3-213ENST00000506958 HERV-K104P63124 156 aa13.13□□□□□ -0.31
APBB3-213ENST00000506958 SND1-IT1Q9HBX3 110 aa13.13□□□□□ -0.31
APBB3-213ENST00000506958 LINC00587B1AMM8 73 aa13.11□□□□□ -0.31
APBB3-213ENST00000506958 LINC00158P58513 81 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms