RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 HERVK_113P63121 156 aa5.74□□□□□ -1.49
SCAMP1-202ENST00000506858 TMEM170BQ5T4T1 132 aa5.74□□□□□ -1.49
SCAMP1-202ENST00000506858 CFAP161Q6P656 301 aa5.74□□□□□ -1.49
SCAMP1-202ENST00000506858 FAM19A3Q7Z5A8 133 aa5.74□□□□□ -1.49
SCAMP1-202ENST00000506858 HIST1H2BLQ99880 126 aa5.74□□□□□ -1.49
SCAMP1-202ENST00000506858 MAP1LC3CQ9BXW4 147 aa5.74□□□□□ -1.49
SCAMP1-202ENST00000506858 GVQW2A0A096LPI5 108 aaPredicted RBP5.73□□□□□ -1.49
SCAMP1-202ENST00000506858 KRTAP10-1P60331 282 aa5.73□□□□□ -1.49
SCAMP1-202ENST00000506858 SPAG11BQ08648 103 aa5.73□□□□□ -1.49
SCAMP1-202ENST00000506858 C10orf25Q5T742 122 aa5.73□□□□□ -1.49
SCAMP1-202ENST00000506858 C2orf82Q6UX34 121 aa5.73□□□□□ -1.49
SCAMP1-202ENST00000506858 BIRC6Q9NR09 4857 aa5.73□□□□□ -1.49
SCAMP1-202ENST00000506858 IGLV5-45A0A087WSX0 123 aa5.72□□□□□ -1.49
SCAMP1-202ENST00000506858 C5orf52A6NGY3 159 aa5.72□□□□□ -1.49
SCAMP1-202ENST00000506858 C16orf90A8MZG2 172 aa5.72□□□□□ -1.49
SCAMP1-202ENST00000506858 SMIM1B2RUZ4 78 aa5.72□□□□□ -1.49
SCAMP1-202ENST00000506858 F8VRH5 84 aa5.72□□□□□ -1.49
SCAMP1-202ENST00000506858 ZNF561-AS1K7EIQ3 104 aa5.72□□□□□ -1.49
SCAMP1-202ENST00000506858 S100A2P29034 98 aa5.72□□□□□ -1.49
SCAMP1-202ENST00000506858 HAMPP81172 84 aa5.72□□□□□ -1.49
SCAMP1-202ENST00000506858 KIAA0087Q14695 138 aa5.72□□□□□ -1.49
SCAMP1-202ENST00000506858 UNQ6190/PRO20217Q6UXQ8 127 aa5.72□□□□□ -1.49
SCAMP1-202ENST00000506858 PACRGQ96M98 296 aaPredicted RBP5.72□□□□□ -1.49
SCAMP1-202ENST00000506858 SEC11AP67812 179 aa5.71□□□□□ -1.5
SCAMP1-202ENST00000506858 C14orf177Q52M58 125 aa5.71□□□□□ -1.5
SCAMP1-202ENST00000506858 Q6ZRU5 148 aa5.71□□□□□ -1.5
SCAMP1-202ENST00000506858 APOMO95445 188 aa5.7□□□□□ -1.5
SCAMP1-202ENST00000506858 ATOH7Q8N100 152 aa5.7□□□□□ -1.5
SCAMP1-202ENST00000506858 FAM30AQ9NZY2 134 aa5.7□□□□□ -1.5
SCAMP1-202ENST00000506858 KIAA1109Q2LD37 5005 aa5.7□□□□□ -1.5
SCAMP1-202ENST00000506858 DPM2O94777 84 aa5.7□□□□□ -1.5
SCAMP1-202ENST00000506858 GCSHP23434 173 aa5.7□□□□□ -1.5
SCAMP1-202ENST00000506858 SYCNQ0VAF6 134 aa5.7□□□□□ -1.5
SCAMP1-202ENST00000506858 C9orf116Q5BN46 136 aaPredicted RBP5.7□□□□□ -1.5
SCAMP1-202ENST00000506858 CAMK2N2Q96S95 79 aa5.7□□□□□ -1.5
SCAMP1-202ENST00000506858 FAT1Q14517 4588 aa5.7□□□□□ -1.5
SCAMP1-202ENST00000506858 TMEM223A0PJW6 202 aa5.69□□□□□ -1.5
SCAMP1-202ENST00000506858 PANO1I0J062 215 aa5.69□□□□□ -1.5
SCAMP1-202ENST00000506858 IGKCP01834 107 aa5.69□□□□□ -1.5
SCAMP1-202ENST00000506858 CHTF8P0CG12 524 aa5.69□□□□□ -1.5
SCAMP1-202ENST00000506858 C6orf226Q5I0X4 101 aa5.69□□□□□ -1.5
SCAMP1-202ENST00000506858 LINC01545Q5VT33 79 aa5.69□□□□□ -1.5
SCAMP1-202ENST00000506858 PET117Q6UWS5 81 aa5.69□□□□□ -1.5
SCAMP1-202ENST00000506858 STPG4Q8N801 248 aa5.69□□□□□ -1.5
SCAMP1-202ENST00000506858 OR10D4PQ8NGN7 298 aa5.69□□□□□ -1.5
SCAMP1-202ENST00000506858 COX7B2Q8TF08 81 aa5.69□□□□□ -1.5
SCAMP1-202ENST00000506858 HSPG2P98160 4391 aa5.68□□□□□ -1.5
SCAMP1-202ENST00000506858 H3BRM9 83 aa5.68□□□□□ -1.5
SCAMP1-202ENST00000506858 PRSS2P07478 247 aa5.68□□□□□ -1.5
SCAMP1-202ENST00000506858 CNBPP62633 177 aaKnown RBP5.68□□□□□ -1.5
SCAMP1-202ENST00000506858 LINC01561Q8N1V8 128 aa5.68□□□□□ -1.5
SCAMP1-202ENST00000506858 C9orf163Q8N9P6 203 aa5.68□□□□□ -1.5
SCAMP1-202ENST00000506858 CARD19Q96LW7 228 aa5.68□□□□□ -1.5
SCAMP1-202ENST00000506858 C6orf48Q9UBA6 75 aa5.68□□□□□ -1.5
SCAMP1-202ENST00000506858 IGLV5-39A0A0G2JS06 123 aa5.67□□□□□ -1.5
SCAMP1-202ENST00000506858 TSPEAR-AS2P59090 65 aa5.67□□□□□ -1.5
SCAMP1-202ENST00000506858 MAJINQ3KP22 176 aa5.67□□□□□ -1.5
SCAMP1-202ENST00000506858 SDIM1Q6ZPB5 146 aa5.67□□□□□ -1.5
SCAMP1-202ENST00000506858 ZNF625Q96I27 306 aaPredicted RBP5.67□□□□□ -1.5
SCAMP1-202ENST00000506858 RYR1P21817 5038 aa5.67□□□□□ -1.5
SCAMP1-202ENST00000506858 IGKV2-24A0A0C4DH68 120 aa5.66□□□□□ -1.5
SCAMP1-202ENST00000506858 PLNP26678 52 aa5.66□□□□□ -1.5
SCAMP1-202ENST00000506858 CKS1BP61024 79 aa5.66□□□□□ -1.5
SCAMP1-202ENST00000506858 C2orf48Q96LS8 159 aa5.66□□□□□ -1.5
SCAMP1-202ENST00000506858 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.66□□□□□ -1.5
SCAMP1-202ENST00000506858 NDUFA1O15239 70 aa5.66□□□□□ -1.5
SCAMP1-202ENST00000506858 Q8IZM0 81 aa5.66□□□□□ -1.5
SCAMP1-202ENST00000506858 IGKV2D-26A0A0A0MRZ7 120 aa5.65□□□□□ -1.51
SCAMP1-202ENST00000506858 SCGB1D1O95968 90 aa5.65□□□□□ -1.51
SCAMP1-202ENST00000506858 GAGE2BQ13066 116 aa5.65□□□□□ -1.51
SCAMP1-202ENST00000506858 TTTY13Q9BZ97 58 aa5.65□□□□□ -1.51
SCAMP1-202ENST00000506858 A0A096LNI7 61 aa5.64□□□□□ -1.51
SCAMP1-202ENST00000506858 A0A0U1RRA0 63 aa5.64□□□□□ -1.51
SCAMP1-202ENST00000506858 GAGE2EQ4V326 116 aa5.64□□□□□ -1.51
SCAMP1-202ENST00000506858 ANKRD39Q53RE8 183 aa5.64□□□□□ -1.51
SCAMP1-202ENST00000506858 GAGE2DQ9UEU5 116 aa5.64□□□□□ -1.51
SCAMP1-202ENST00000506858 C20orf202A1L168 122 aa5.63□□□□□ -1.51
SCAMP1-202ENST00000506858 XGP55808 180 aa5.63□□□□□ -1.51
SCAMP1-202ENST00000506858 RPL18AQ02543 176 aaKnown RBP5.63□□□□□ -1.51
SCAMP1-202ENST00000506858 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
SCAMP1-202ENST00000506858 Q6ZRP5 223 aa5.63□□□□□ -1.51
SCAMP1-202ENST00000506858 DPH3Q96FX2 82 aa5.63□□□□□ -1.51
SCAMP1-202ENST00000506858 LEPROTO15243 131 aa5.63□□□□□ -1.51
SCAMP1-202ENST00000506858 PFN2P35080 140 aa5.63□□□□□ -1.51
SCAMP1-202ENST00000506858 J3QQQ9 107 aa5.62□□□□□ -1.51
SCAMP1-202ENST00000506858 HERVK_113P61574 105 aa5.62□□□□□ -1.51
SCAMP1-202ENST00000506858 XAGE1AQ9HD64 81 aa5.62□□□□□ -1.51
SCAMP1-202ENST00000506858 NDUFA12Q9UI09 145 aa5.62□□□□□ -1.51
SCAMP1-202ENST00000506858 LOC107984640A0A0U1RRK4 108 aa5.61□□□□□ -1.51
SCAMP1-202ENST00000506858 A0A1W2PNN7 141 aa5.61□□□□□ -1.51
SCAMP1-202ENST00000506858 FAM168BA1KXE4 195 aa5.61□□□□□ -1.51
SCAMP1-202ENST00000506858 E9PLD3 99 aa5.61□□□□□ -1.51
SCAMP1-202ENST00000506858 SMR3BP02814 79 aaPredicted RBP5.61□□□□□ -1.51
SCAMP1-202ENST00000506858 AKR1D1P51857 326 aa5.61□□□□□ -1.51
SCAMP1-202ENST00000506858 SCXQ7RTU7 201 aa5.61□□□□□ -1.51
SCAMP1-202ENST00000506858 CIRBP-AS1Q8TBR5 109 aa5.61□□□□□ -1.51
SCAMP1-202ENST00000506858 PLEKHB2Q96CS7 222 aa5.61□□□□□ -1.51
SCAMP1-202ENST00000506858 TRBV30A0A0K0K1B3 111 aa5.6□□□□□ -1.51
SCAMP1-202ENST00000506858 HERC2O95714 4834 aa5.6□□□□□ -1.51
SCAMP1-202ENST00000506858 SMIM13P0DJ93 91 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms