RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 MT2AP02795 61 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 ESDP10768 282 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 POLR2KP53803 58 aaKnown RBP1.86□□□□□ -2.11
TCOF1-208ENST00000506063 SEC11AP67812 179 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 RPL18AQ02543 176 aaKnown RBP1.86□□□□□ -2.11
TCOF1-208ENST00000506063 SPAG11BQ08648 103 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 RNASE13Q5GAN3 156 aaKnown RBP1.86□□□□□ -2.11
TCOF1-208ENST00000506063 C1orf137Q5JT78 98 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 CD164L2Q6UWJ8 174 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 LINC00173Q6ZV60 143 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 C15orf56Q8N910 161 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 TMEM141Q96I45 108 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 KRTAP2-2Q9BYT5 123 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 LINC00474Q9P2X8 69 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 UBE2D4Q9Y2X8 147 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 CSDC2Q9Y534 153 aaKnown RBP1.86□□□□□ -2.11
TCOF1-208ENST00000506063 NDUFA1O15239 70 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 MT1FP04733 61 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 PRSS2P07478 247 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 NPSP0C0P6 89 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 CXCL5P42830 114 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 RAB5BP61020 215 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 RPL39P62891 51 aaKnown RBP1.85□□□□□ -2.11
TCOF1-208ENST00000506063 MRPS36P82909 103 aaKnown RBP1.85□□□□□ -2.11
TCOF1-208ENST00000506063 IFITM2Q01629 132 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 FABP9Q0Z7S8 132 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 FOXI1Q12951 378 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 XP32Q5T750 250 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 C2orf66Q6UXQ4 117 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 Q8N8P6 123 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 OR10D4PQ8NGN7 298 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 ORAOV1Q8WV07 137 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 CAMK2N2Q96S95 79 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 TIMM17AQ99595 171 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 ALKBH7Q9BT30 221 aaPredicted RBP1.85□□□□□ -2.11
TCOF1-208ENST00000506063 GNB1LQ9BYB4 327 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 MRPL18Q9H0U6 180 aaKnown RBP1.85□□□□□ -2.11
TCOF1-208ENST00000506063 GEMIN7Q9H840 131 aaKnown RBP1.85□□□□□ -2.11
TCOF1-208ENST00000506063 CDC42SE2Q9NRR3 84 aa1.85□□□□□ -2.11
TCOF1-208ENST00000506063 IGLV4-69A0A075B6H9 119 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 IGLV4-3A0A075B6K6 122 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 LOC107984640A0A0U1RRK4 108 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 F8WDY8 70 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 H3BRM9 83 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 HBDP02042 147 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 HERVK_113P63121 156 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 SYCNQ0VAF6 134 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 KIAA1644Q3SXP7 199 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 KRTAP13-2Q52LG2 175 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 LINC00469Q8N7U9 141 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 C2orf48Q96LS8 159 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 VCX2Q9H322 139 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 LINC00846Q9NV44 126 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 PYGO1Q9Y3Y4 419 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 TRAPPC1Q9Y5R8 145 aa1.84□□□□□ -2.11
TCOF1-208ENST00000506063 TRBV30A0A0K0K1B3 111 aa1.83□□□□□ -2.12
TCOF1-208ENST00000506063 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.83□□□□□ -2.12
TCOF1-208ENST00000506063 HSBP1O75506 76 aa1.83□□□□□ -2.12
TCOF1-208ENST00000506063 ATP5LO75964 103 aa1.83□□□□□ -2.12
TCOF1-208ENST00000506063 NDUFA6P56556 154 aa1.83□□□□□ -2.12
TCOF1-208ENST00000506063 CKS1BP61024 79 aa1.83□□□□□ -2.12
TCOF1-208ENST00000506063 GAGE2BQ13066 116 aa1.83□□□□□ -2.12
TCOF1-208ENST00000506063 C10orf91Q5T1B1 145 aa1.83□□□□□ -2.12
TCOF1-208ENST00000506063 SFTA2Q6UW10 78 aa1.83□□□□□ -2.12
TCOF1-208ENST00000506063 PHF5AQ7RTV0 110 aaKnown RBP1.83□□□□□ -2.12
TCOF1-208ENST00000506063 C5orf38Q86SI9 138 aa1.83□□□□□ -2.12
TCOF1-208ENST00000506063 TOMM6Q96B49 74 aa1.83□□□□□ -2.12
TCOF1-208ENST00000506063 SCGB3A1Q96QR1 104 aa1.83□□□□□ -2.12
TCOF1-208ENST00000506063 MRPL35Q9NZE8 188 aaKnown RBP1.83□□□□□ -2.12
TCOF1-208ENST00000506063 TOMM7Q9P0U1 55 aa1.83□□□□□ -2.12
TCOF1-208ENST00000506063 A0A087WZ39 114 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 IGHV3OR16-9A0A0B4J2B5 98 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 PRSS47A8MTI9 375 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 PTTG1IPP53801 180 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 UBE2BP63146 152 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 PMVKQ15126 192 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 FP248Q71RG6 208 aaPredicted RBP1.82□□□□□ -2.12
TCOF1-208ENST00000506063 ERASQ7Z444 233 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 BAGE3Q86Y29 109 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 CBLN2Q8IUK8 224 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 Q8IZM0 81 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 LINC01561Q8N1V8 128 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 LINC00337Q8N6G1 96 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 TYMSOSQ8TAI1 123 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 C18orf32Q8TCD1 76 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 CHCHD1Q96BP2 118 aaKnown RBP1.82□□□□□ -2.12
TCOF1-208ENST00000506063 LINC00526Q96FQ7 95 aa1.82□□□□□ -2.12
TCOF1-208ENST00000506063 TINCRA0A1B0GVN0 87 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 IGIPA6NJ69 53 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 NDUFC2-KCTD14E9PQ53 114 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 F8VRH5 84 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 M0QXV9 152 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 HERVK_113P61574 105 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 RNF151Q2KHN1 245 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 GAGE2EQ4V326 116 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 PDZD11Q5EBL8 140 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 C6orf226Q5I0X4 101 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 LINC00242Q5T6M2 205 aa1.81□□□□□ -2.12
TCOF1-208ENST00000506063 FAM19A5Q7Z5A7 132 aaPredicted RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms