RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 LINC00959A0A1B0GUT2 108 aa6.66□□□□□ -1.34
NR1I3-222ENST00000506018 F8VRH5 84 aa6.66□□□□□ -1.34
NR1I3-222ENST00000506018 FOXI1Q12951 378 aa6.66□□□□□ -1.34
NR1I3-222ENST00000506018 C7orf33Q8WU49 177 aa6.66□□□□□ -1.34
NR1I3-222ENST00000506018 OPRPNQ99935 248 aaPredicted RBP6.66□□□□□ -1.34
NR1I3-222ENST00000506018 A0A087WYN8 130 aa6.65□□□□□ -1.35
NR1I3-222ENST00000506018 ZNF561-AS1K7EIQ3 104 aa6.65□□□□□ -1.35
NR1I3-222ENST00000506018 SCGB1D1O95968 90 aa6.65□□□□□ -1.35
NR1I3-222ENST00000506018 SLPIP03973 132 aa6.65□□□□□ -1.35
NR1I3-222ENST00000506018 PLNP26678 52 aa6.65□□□□□ -1.35
NR1I3-222ENST00000506018 KRTAP10-4P60372 401 aaPredicted RBP6.65□□□□□ -1.35
NR1I3-222ENST00000506018 HERVK_113P63121 156 aa6.65□□□□□ -1.35
NR1I3-222ENST00000506018 COX6A2Q02221 97 aa6.65□□□□□ -1.35
NR1I3-222ENST00000506018 ANKRD39Q53RE8 183 aa6.65□□□□□ -1.35
NR1I3-222ENST00000506018 XP32Q5T750 250 aa6.65□□□□□ -1.35
NR1I3-222ENST00000506018 LINC00173Q6ZV60 143 aa6.65□□□□□ -1.35
NR1I3-222ENST00000506018 SPACA4Q8TDM5 124 aa6.65□□□□□ -1.35
NR1I3-222ENST00000506018 GEMIN7Q9H840 131 aaKnown RBP6.65□□□□□ -1.35
NR1I3-222ENST00000506018 LINC00474Q9P2X8 69 aa6.65□□□□□ -1.35
NR1I3-222ENST00000506018 TRAV13-1A0A0B4J241 112 aa6.64□□□□□ -1.35
NR1I3-222ENST00000506018 PANO1I0J062 215 aa6.64□□□□□ -1.35
NR1I3-222ENST00000506018 CHTF8P0CG12 524 aa6.64□□□□□ -1.35
NR1I3-222ENST00000506018 MALP21145 153 aa6.64□□□□□ -1.35
NR1I3-222ENST00000506018 RNASE13Q5GAN3 156 aaKnown RBP6.64□□□□□ -1.35
NR1I3-222ENST00000506018 SERTAD4-AS1Q5TG53 156 aa6.64□□□□□ -1.35
NR1I3-222ENST00000506018 LINC01545Q5VT33 79 aa6.64□□□□□ -1.35
NR1I3-222ENST00000506018 CD164L2Q6UWJ8 174 aa6.64□□□□□ -1.35
NR1I3-222ENST00000506018 TINCRA0A1B0GVN0 87 aa6.63□□□□□ -1.35
NR1I3-222ENST00000506018 DPM2O94777 84 aa6.63□□□□□ -1.35
NR1I3-222ENST00000506018 IGKCP01834 107 aa6.63□□□□□ -1.35
NR1I3-222ENST00000506018 UBE2D1P51668 147 aa6.63□□□□□ -1.35
NR1I3-222ENST00000506018 ODF1Q14990 250 aa6.63□□□□□ -1.35
NR1I3-222ENST00000506018 MAJINQ3KP22 176 aa6.63□□□□□ -1.35
NR1I3-222ENST00000506018 FAM19A3Q7Z5A8 133 aa6.63□□□□□ -1.35
NR1I3-222ENST00000506018 CARD19Q96LW7 228 aa6.63□□□□□ -1.35
NR1I3-222ENST00000506018 PLAC8Q9NZF1 115 aa6.63□□□□□ -1.35
NR1I3-222ENST00000506018 IGKV2-24A0A0C4DH68 120 aa6.62□□□□□ -1.35
NR1I3-222ENST00000506018 H3BRM9 83 aa6.62□□□□□ -1.35
NR1I3-222ENST00000506018 APOMO95445 188 aa6.62□□□□□ -1.35
NR1I3-222ENST00000506018 IGLC3P0DOY3 106 aa6.62□□□□□ -1.35
NR1I3-222ENST00000506018 JOSD1Q15040 202 aaPredicted RBP6.62□□□□□ -1.35
NR1I3-222ENST00000506018 Q6ZRU5 148 aa6.62□□□□□ -1.35
NR1I3-222ENST00000506018 MRPL35Q9NZE8 188 aaKnown RBP6.62□□□□□ -1.35
NR1I3-222ENST00000506018 LOC105371267A0A1B0GV96 52 aa6.61□□□□□ -1.35
NR1I3-222ENST00000506018 HSBP1L1C9JCN9 74 aa6.61□□□□□ -1.35
NR1I3-222ENST00000506018 COX7A2LO14548 114 aa6.61□□□□□ -1.35
NR1I3-222ENST00000506018 HERVK_113P61574 105 aa6.61□□□□□ -1.35
NR1I3-222ENST00000506018 STPG4Q8N801 248 aa6.61□□□□□ -1.35
NR1I3-222ENST00000506018 FAM104AQ969W3 186 aa6.61□□□□□ -1.35
NR1I3-222ENST00000506018 A0A0J9YXV3 536 aa6.6□□□□□ -1.35
NR1I3-222ENST00000506018 SYCNQ0VAF6 134 aa6.6□□□□□ -1.35
NR1I3-222ENST00000506018 TMEM170BQ5T4T1 132 aa6.6□□□□□ -1.35
NR1I3-222ENST00000506018 LINC00242Q5T6M2 205 aa6.6□□□□□ -1.35
NR1I3-222ENST00000506018 ZC2HC1BQ5TFG8 222 aa6.6□□□□□ -1.35
NR1I3-222ENST00000506018 LINC00469Q8N7U9 141 aa6.6□□□□□ -1.35
NR1I3-222ENST00000506018 S100A12P80511 92 aa6.59□□□□□ -1.35
NR1I3-222ENST00000506018 LINC01561Q8N1V8 128 aa6.59□□□□□ -1.35
NR1I3-222ENST00000506018 IGLV4-69A0A075B6H9 119 aa6.58□□□□□ -1.36
NR1I3-222ENST00000506018 A0A096LNI7 61 aa6.58□□□□□ -1.36
NR1I3-222ENST00000506018 C11orf86A6NJI1 115 aa6.58□□□□□ -1.36
NR1I3-222ENST00000506018 CAMK2N2Q96S95 79 aa6.58□□□□□ -1.36
NR1I3-222ENST00000506018 IGLV5-45A0A087WSX0 123 aa6.57□□□□□ -1.36
NR1I3-222ENST00000506018 A0A087WZ39 114 aa6.57□□□□□ -1.36
NR1I3-222ENST00000506018 LOC107984640A0A0U1RRK4 108 aa6.57□□□□□ -1.36
NR1I3-222ENST00000506018 SMIM6P0DI80 62 aa6.57□□□□□ -1.36
NR1I3-222ENST00000506018 HNRNPA3P51991 378 aaKnown RBP6.57□□□□□ -1.36
NR1I3-222ENST00000506018 LINC00526Q96FQ7 95 aa6.57□□□□□ -1.36
NR1I3-222ENST00000506018 C2orf48Q96LS8 159 aa6.57□□□□□ -1.36
NR1I3-222ENST00000506018 PMCHL2Q9BQD1 86 aa6.57□□□□□ -1.36
NR1I3-222ENST00000506018 IGHV3OR16-9A0A0B4J2B5 98 aa6.57□□□□□ -1.36
NR1I3-222ENST00000506018 ZNF22P17026 224 aaPredicted RBP6.57□□□□□ -1.36
NR1I3-222ENST00000506018 VAMP8Q9BV40 100 aa6.57□□□□□ -1.36
NR1I3-222ENST00000506018 CDKN2A-AS1Q9UH64 79 aa6.57□□□□□ -1.36
NR1I3-222ENST00000506018 LRP1Q07954 4544 aaKnown RBP6.56□□□□□ -1.36
NR1I3-222ENST00000506018 PTTG1IPP53801 180 aa6.56□□□□□ -1.36
NR1I3-222ENST00000506018 GAGE2BQ13066 116 aa6.56□□□□□ -1.36
NR1I3-222ENST00000506018 PYY3Q5JQD4 70 aa6.56□□□□□ -1.36
NR1I3-222ENST00000506018 C5orf38Q86SI9 138 aa6.56□□□□□ -1.36
NR1I3-222ENST00000506018 TMEM223A0PJW6 202 aa6.55□□□□□ -1.36
NR1I3-222ENST00000506018 F8WDY8 70 aa6.55□□□□□ -1.36
NR1I3-222ENST00000506018 PRSS2P07478 247 aa6.55□□□□□ -1.36
NR1I3-222ENST00000506018 PRR3P79522 188 aaKnown RBP6.55□□□□□ -1.36
NR1I3-222ENST00000506018 SPAG11BQ08648 103 aa6.55□□□□□ -1.36
NR1I3-222ENST00000506018 ATOH7Q8N100 152 aa6.55□□□□□ -1.36
NR1I3-222ENST00000506018 PLEKHB2Q96CS7 222 aa6.55□□□□□ -1.36
NR1I3-222ENST00000506018 PLA2G2DQ9UNK4 145 aa6.55□□□□□ -1.36
NR1I3-222ENST00000506018 PKHD1L1Q86WI1 4243 aa6.54□□□□□ -1.36
NR1I3-222ENST00000506018 FAT3Q8TDW7 4589 aa6.54□□□□□ -1.36
NR1I3-222ENST00000506018 RPL18AQ02543 176 aaKnown RBP6.54□□□□□ -1.36
NR1I3-222ENST00000506018 SFTA2Q6UW10 78 aa6.54□□□□□ -1.36
NR1I3-222ENST00000506018 Q6ZRP5 223 aa6.54□□□□□ -1.36
NR1I3-222ENST00000506018 ORAOV1Q8WV07 137 aa6.54□□□□□ -1.36
NR1I3-222ENST00000506018 E9PLD3 99 aa6.53□□□□□ -1.36
NR1I3-222ENST00000506018 RNF151Q2KHN1 245 aa6.53□□□□□ -1.36
NR1I3-222ENST00000506018 SMIM1B2RUZ4 78 aa6.52□□□□□ -1.37
NR1I3-222ENST00000506018 NDUFA1O15239 70 aa6.52□□□□□ -1.37
NR1I3-222ENST00000506018 LEPROTO15243 131 aa6.52□□□□□ -1.37
NR1I3-222ENST00000506018 SPINK8P0C7L1 97 aa6.52□□□□□ -1.37
NR1I3-222ENST00000506018 LGALS3P17931 250 aaKnown RBP6.52□□□□□ -1.37
NR1I3-222ENST00000506018 CXCL5P42830 114 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms