RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 HIGD2BQ4VC39 106 aa6.37□□□□□ -1.39
NR1I3-220ENST00000505005 RNASE13Q5GAN3 156 aaKnown RBP6.37□□□□□ -1.39
NR1I3-220ENST00000505005 LINC00242Q5T6M2 205 aa6.37□□□□□ -1.39
NR1I3-220ENST00000505005 ORAOV1Q8WV07 137 aa6.37□□□□□ -1.39
NR1I3-220ENST00000505005 DNAH11Q96DT5 4516 aa6.37□□□□□ -1.39
NR1I3-220ENST00000505005 TRBV30A0A0K0K1B3 111 aa6.36□□□□□ -1.39
NR1I3-220ENST00000505005 PLNP26678 52 aa6.36□□□□□ -1.39
NR1I3-220ENST00000505005 CKS1BP61024 79 aa6.36□□□□□ -1.39
NR1I3-220ENST00000505005 CIRBPQ14011 172 aaKnown RBP6.36□□□□□ -1.39
NR1I3-220ENST00000505005 C6orf226Q5I0X4 101 aa6.36□□□□□ -1.39
NR1I3-220ENST00000505005 LINC00173Q6ZV60 143 aa6.36□□□□□ -1.39
NR1I3-220ENST00000505005 ODF1Q14990 250 aa6.35□□□□□ -1.39
NR1I3-220ENST00000505005 Q8IZM0 81 aa6.35□□□□□ -1.39
NR1I3-220ENST00000505005 C7orf33Q8WU49 177 aa6.35□□□□□ -1.39
NR1I3-220ENST00000505005 OPRPNQ99935 248 aaPredicted RBP6.35□□□□□ -1.39
NR1I3-220ENST00000505005 F8VRH5 84 aa6.34□□□□□ -1.39
NR1I3-220ENST00000505005 COX6A2Q02221 97 aa6.34□□□□□ -1.39
NR1I3-220ENST00000505005 FAM104AQ969W3 186 aa6.34□□□□□ -1.39
NR1I3-220ENST00000505005 VAMP8Q9BV40 100 aa6.34□□□□□ -1.39
NR1I3-220ENST00000505005 CST9LQ9H4G1 147 aa6.34□□□□□ -1.39
NR1I3-220ENST00000505005 HSBP1L1C9JCN9 74 aa6.33□□□□□ -1.4
NR1I3-220ENST00000505005 DPM2O94777 84 aa6.33□□□□□ -1.4
NR1I3-220ENST00000505005 TLX1NBP0CAT3 122 aa6.33□□□□□ -1.4
NR1I3-220ENST00000505005 FUSP35637 526 aaKnown RBP eCLIP6.33□□□□□ -1.4
NR1I3-220ENST00000505005 SCXQ7RTU7 201 aa6.33□□□□□ -1.4
NR1I3-220ENST00000505005 LINC00469Q8N7U9 141 aa6.33□□□□□ -1.4
NR1I3-220ENST00000505005 CIRBP-AS1Q8TBR5 109 aa6.33□□□□□ -1.4
NR1I3-220ENST00000505005 IGLV5-45A0A087WSX0 123 aa6.32□□□□□ -1.4
NR1I3-220ENST00000505005 SLPIP03973 132 aa6.32□□□□□ -1.4
NR1I3-220ENST00000505005 Q5VSD8 79 aa6.32□□□□□ -1.4
NR1I3-220ENST00000505005 SPACA4Q8TDM5 124 aa6.32□□□□□ -1.4
NR1I3-220ENST00000505005 PLAC8Q9NZF1 115 aa6.32□□□□□ -1.4
NR1I3-220ENST00000505005 FAM30AQ9NZY2 134 aa6.32□□□□□ -1.4
NR1I3-220ENST00000505005 TSTD3H0UI37 97 aa6.31□□□□□ -1.4
NR1I3-220ENST00000505005 IGKCP01834 107 aa6.31□□□□□ -1.4
NR1I3-220ENST00000505005 MAJINQ3KP22 176 aa6.31□□□□□ -1.4
NR1I3-220ENST00000505005 Q6ZRU5 148 aa6.31□□□□□ -1.4
NR1I3-220ENST00000505005 CHTOPQ9Y3Y2 248 aaKnown RBP6.31□□□□□ -1.4
NR1I3-220ENST00000505005 DYNC1H1Q14204 4646 aaKnown RBP6.3□□□□□ -1.4
NR1I3-220ENST00000505005 A0A0J9YXV3 536 aa6.3□□□□□ -1.4
NR1I3-220ENST00000505005 LINC00587B1AMM8 73 aa6.3□□□□□ -1.4
NR1I3-220ENST00000505005 H0Y8G0 127 aa6.3□□□□□ -1.4
NR1I3-220ENST00000505005 IGLC3P0DOY3 106 aa6.3□□□□□ -1.4
NR1I3-220ENST00000505005 PTTG1IPP53801 180 aa6.3□□□□□ -1.4
NR1I3-220ENST00000505005 LINC01620Q4KN68 170 aa6.3□□□□□ -1.4
NR1I3-220ENST00000505005 STPG4Q8N801 248 aa6.3□□□□□ -1.4
NR1I3-220ENST00000505005 TOMM7Q9P0U1 55 aa6.3□□□□□ -1.4
NR1I3-220ENST00000505005 CDKN2A-AS1Q9UH64 79 aa6.3□□□□□ -1.4
NR1I3-220ENST00000505005 LRP1BQ9NZR2 4599 aa6.29□□□□□ -1.4
NR1I3-220ENST00000505005 A0A087WYN8 130 aa6.29□□□□□ -1.4
NR1I3-220ENST00000505005 IGKV2-24A0A0C4DH68 120 aa6.29□□□□□ -1.4
NR1I3-220ENST00000505005 NDUFC2-KCTD14E9PQ53 114 aa6.29□□□□□ -1.4
NR1I3-220ENST00000505005 SMR3BP02814 79 aaPredicted RBP6.29□□□□□ -1.4
NR1I3-220ENST00000505005 DNAH5Q8TE73 4624 aa6.28□□□□□ -1.4
NR1I3-220ENST00000505005 C11orf86A6NJI1 115 aa6.28□□□□□ -1.4
NR1I3-220ENST00000505005 H3BS24 57 aa6.28□□□□□ -1.4
NR1I3-220ENST00000505005 INAFM2P0DMQ5 153 aa6.28□□□□□ -1.4
NR1I3-220ENST00000505005 RPL18AQ02543 176 aaKnown RBP6.28□□□□□ -1.4
NR1I3-220ENST00000505005 GAGE2BQ13066 116 aa6.28□□□□□ -1.4
NR1I3-220ENST00000505005 COX17Q14061 63 aa6.28□□□□□ -1.4
NR1I3-220ENST00000505005 KIAA0087Q14695 138 aa6.28□□□□□ -1.4
NR1I3-220ENST00000505005 SPATA45Q537H7 98 aa6.28□□□□□ -1.4
NR1I3-220ENST00000505005 COX7B2Q8TF08 81 aa6.28□□□□□ -1.4
NR1I3-220ENST00000505005 KIAA1109Q2LD37 5005 aa6.27□□□□□ -1.41
NR1I3-220ENST00000505005 A0A096LNI7 61 aa6.27□□□□□ -1.41
NR1I3-220ENST00000505005 RPL37AP61513 92 aaKnown RBP6.27□□□□□ -1.41
NR1I3-220ENST00000505005 HERVK_113P61574 105 aa6.27□□□□□ -1.41
NR1I3-220ENST00000505005 TMEM170BQ5T4T1 132 aa6.27□□□□□ -1.41
NR1I3-220ENST00000505005 LINC00526Q96FQ7 95 aa6.27□□□□□ -1.41
NR1I3-220ENST00000505005 PMCHL2Q9BQD1 86 aa6.27□□□□□ -1.41
NR1I3-220ENST00000505005 PAM16Q9Y3D7 125 aa6.27□□□□□ -1.41
NR1I3-220ENST00000505005 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.27□□□□□ -1.41
NR1I3-220ENST00000505005 SMIM1B2RUZ4 78 aa6.26□□□□□ -1.41
NR1I3-220ENST00000505005 DLEU1O43261 78 aa6.26□□□□□ -1.41
NR1I3-220ENST00000505005 UNQ6190/PRO20217Q6UXQ8 127 aa6.26□□□□□ -1.41
NR1I3-220ENST00000505005 ATOH7Q8N100 152 aa6.26□□□□□ -1.41
NR1I3-220ENST00000505005 UQCR10Q9UDW1 63 aa6.26□□□□□ -1.41
NR1I3-220ENST00000505005 RYR1P21817 5038 aa6.26□□□□□ -1.41
NR1I3-220ENST00000505005 E9PLD3 99 aa6.25□□□□□ -1.41
NR1I3-220ENST00000505005 LBHQ53QV2 105 aaPredicted RBP6.25□□□□□ -1.41
NR1I3-220ENST00000505005 ZC2HC1BQ5TFG8 222 aa6.25□□□□□ -1.41
NR1I3-220ENST00000505005 Q6ZRP5 223 aa6.25□□□□□ -1.41
NR1I3-220ENST00000505005 MIEN1Q9BRT3 115 aa6.25□□□□□ -1.41
NR1I3-220ENST00000505005 C6orf48Q9UBA6 75 aa6.25□□□□□ -1.41
NR1I3-220ENST00000505005 IGLV5-39A0A0G2JS06 123 aa6.24□□□□□ -1.41
NR1I3-220ENST00000505005 COX8AP10176 69 aa6.24□□□□□ -1.41
NR1I3-220ENST00000505005 SLC25A34Q6PIV7 304 aa6.24□□□□□ -1.41
NR1I3-220ENST00000505005 HERC2O95714 4834 aa6.24□□□□□ -1.41
NR1I3-220ENST00000505005 CHTF8P0CG12 524 aa6.23□□□□□ -1.41
NR1I3-220ENST00000505005 ZNF22P17026 224 aaPredicted RBP6.23□□□□□ -1.41
NR1I3-220ENST00000505005 DDTP30046 118 aa6.23□□□□□ -1.41
NR1I3-220ENST00000505005 HERV-K104P63124 156 aa6.23□□□□□ -1.41
NR1I3-220ENST00000505005 C9orf116Q5BN46 136 aaPredicted RBP6.23□□□□□ -1.41
NR1I3-220ENST00000505005 TMEM223A0PJW6 202 aa6.22□□□□□ -1.41
NR1I3-220ENST00000505005 SPINK8P0C7L1 97 aa6.22□□□□□ -1.41
NR1I3-220ENST00000505005 GAGE2EQ4V326 116 aa6.22□□□□□ -1.41
NR1I3-220ENST00000505005 C2orf82Q6UX34 121 aa6.22□□□□□ -1.41
NR1I3-220ENST00000505005 BOD1L2Q8IYS8 172 aa6.22□□□□□ -1.41
NR1I3-220ENST00000505005 PLEKHB2Q96CS7 222 aa6.22□□□□□ -1.41
NR1I3-220ENST00000505005 GAGE2DQ9UEU5 116 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms