RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 MUC17Q685J3 4493 aa5.46□□□□□ -1.54
PDGFC-204ENST00000504672 TSPAN13O95857 204 aa5.45□□□□□ -1.54
PDGFC-204ENST00000504672 FGF6P10767 208 aa5.45□□□□□ -1.54
PDGFC-204ENST00000504672 SMAGPQ0VAQ4 97 aa5.45□□□□□ -1.54
PDGFC-204ENST00000504672 GAGE2BQ13066 116 aa5.45□□□□□ -1.54
PDGFC-204ENST00000504672 PDZD11Q5EBL8 140 aa5.45□□□□□ -1.54
PDGFC-204ENST00000504672 TMEM18Q96B42 140 aa5.45□□□□□ -1.54
PDGFC-204ENST00000504672 PACRGQ96M98 296 aaPredicted RBP5.45□□□□□ -1.54
PDGFC-204ENST00000504672 CDC42SE2Q9NRR3 84 aa5.45□□□□□ -1.54
PDGFC-204ENST00000504672 LINC00474Q9P2X8 69 aa5.45□□□□□ -1.54
PDGFC-204ENST00000504672 GVQW2A0A096LPI5 108 aaPredicted RBP5.44□□□□□ -1.54
PDGFC-204ENST00000504672 LOC389332A0A1B0GUA5 103 aa5.44□□□□□ -1.54
PDGFC-204ENST00000504672 CCL25O15444 150 aa5.44□□□□□ -1.54
PDGFC-204ENST00000504672 C2orf66Q6UXQ4 117 aa5.44□□□□□ -1.54
PDGFC-204ENST00000504672 ERASQ7Z444 233 aa5.44□□□□□ -1.54
PDGFC-204ENST00000504672 CHCHD10Q8WYQ3 142 aaPredicted RBP5.44□□□□□ -1.54
PDGFC-204ENST00000504672 AMELXQ99217 191 aa5.44□□□□□ -1.54
PDGFC-204ENST00000504672 CYSLTR1Q9Y271 337 aa5.44□□□□□ -1.54
PDGFC-204ENST00000504672 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.43□□□□□ -1.54
PDGFC-204ENST00000504672 IGKV2-29A2NJV5 120 aaPredicted RBP5.43□□□□□ -1.54
PDGFC-204ENST00000504672 C1orf196B1AJZ1 125 aa5.43□□□□□ -1.54
PDGFC-204ENST00000504672 RPL39P62891 51 aaKnown RBP5.43□□□□□ -1.54
PDGFC-204ENST00000504672 FA2HQ7L5A8 372 aa5.43□□□□□ -1.54
PDGFC-204ENST00000504672 PHF5AQ7RTV0 110 aaKnown RBP5.43□□□□□ -1.54
PDGFC-204ENST00000504672 DIRC1Q969H9 104 aa5.43□□□□□ -1.54
PDGFC-204ENST00000504672 IGLV4-3A0A075B6K6 122 aa5.42□□□□□ -1.54
PDGFC-204ENST00000504672 UBE2L6O14933 153 aa5.42□□□□□ -1.54
PDGFC-204ENST00000504672 SERF1AO75920 110 aa5.42□□□□□ -1.54
PDGFC-204ENST00000504672 HBDP02042 147 aa5.42□□□□□ -1.54
PDGFC-204ENST00000504672 MALP21145 153 aa5.42□□□□□ -1.54
PDGFC-204ENST00000504672 PTTG1IPP53801 180 aa5.42□□□□□ -1.54
PDGFC-204ENST00000504672 LINC00173Q6ZV60 143 aa5.42□□□□□ -1.54
PDGFC-204ENST00000504672 OR5A1Q8NGJ0 315 aa5.42□□□□□ -1.54
PDGFC-204ENST00000504672 TMEM141Q96I45 108 aa5.42□□□□□ -1.54
PDGFC-204ENST00000504672 CARD19Q96LW7 228 aa5.42□□□□□ -1.54
PDGFC-204ENST00000504672 NUPR1O60356 82 aa5.41□□□□□ -1.54
PDGFC-204ENST00000504672 IGLV7-43P04211 117 aa5.41□□□□□ -1.54
PDGFC-204ENST00000504672 XCL1P47992 114 aa5.41□□□□□ -1.54
PDGFC-204ENST00000504672 FOXI1Q12951 378 aa5.41□□□□□ -1.54
PDGFC-204ENST00000504672 KRTAP11-1Q8IUC1 163 aa5.41□□□□□ -1.54
PDGFC-204ENST00000504672 IGLV1-50A0A075B6I6 118 aa5.4□□□□□ -1.54
PDGFC-204ENST00000504672 A0A087WZ39 114 aa5.4□□□□□ -1.54
PDGFC-204ENST00000504672 KRTAP1-4P0C5Y4 121 aa5.4□□□□□ -1.54
PDGFC-204ENST00000504672 SYCNQ0VAF6 134 aa5.4□□□□□ -1.54
PDGFC-204ENST00000504672 C9orf116Q5BN46 136 aaPredicted RBP5.4□□□□□ -1.54
PDGFC-204ENST00000504672 PAPPA-AS1Q5QFB9 102 aa5.4□□□□□ -1.54
PDGFC-204ENST00000504672 Q6ZUT4 128 aa5.4□□□□□ -1.54
PDGFC-204ENST00000504672 BAGE3Q86Y29 109 aa5.4□□□□□ -1.54
PDGFC-204ENST00000504672 TMEM101Q96IK0 257 aa5.4□□□□□ -1.54
PDGFC-204ENST00000504672 TRAV12-1A0A0B4J245 112 aa5.39□□□□□ -1.55
PDGFC-204ENST00000504672 H0Y9J4 135 aa5.39□□□□□ -1.55
PDGFC-204ENST00000504672 ATP5LO75964 103 aa5.39□□□□□ -1.55
PDGFC-204ENST00000504672 UBE2D1P51668 147 aa5.39□□□□□ -1.55
PDGFC-204ENST00000504672 AMMECR1LQ6DCA0 310 aa5.39□□□□□ -1.55
PDGFC-204ENST00000504672 LINC01561Q8N1V8 128 aa5.39□□□□□ -1.55
PDGFC-204ENST00000504672 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
PDGFC-204ENST00000504672 IGHV3OR16-9A0A0B4J2B5 98 aa5.38□□□□□ -1.55
PDGFC-204ENST00000504672 LOC107984640A0A0U1RRK4 108 aa5.38□□□□□ -1.55
PDGFC-204ENST00000504672 LINC00959A0A1B0GUT2 108 aa5.38□□□□□ -1.55
PDGFC-204ENST00000504672 C5orf52A6NGY3 159 aa5.38□□□□□ -1.55
PDGFC-204ENST00000504672 HSBP1O75506 76 aa5.38□□□□□ -1.55
PDGFC-204ENST00000504672 RNASEKQ6P5S7 137 aaKnown RBP5.38□□□□□ -1.55
PDGFC-204ENST00000504672 IGHV1-58A0A0C4DH39 117 aa5.37□□□□□ -1.55
PDGFC-204ENST00000504672 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.37□□□□□ -1.55
PDGFC-204ENST00000504672 CD164L2Q6UWJ8 174 aa5.37□□□□□ -1.55
PDGFC-204ENST00000504672 SCGB3A1Q96QR1 104 aa5.37□□□□□ -1.55
PDGFC-204ENST00000504672 CST9LQ9H4G1 147 aa5.37□□□□□ -1.55
PDGFC-204ENST00000504672 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
PDGFC-204ENST00000504672 IGLV4-69A0A075B6H9 119 aa5.36□□□□□ -1.55
PDGFC-204ENST00000504672 PMVKQ15126 192 aa5.36□□□□□ -1.55
PDGFC-204ENST00000504672 PMCHL1Q16048 86 aa5.36□□□□□ -1.55
PDGFC-204ENST00000504672 LINC00242Q5T6M2 205 aa5.36□□□□□ -1.55
PDGFC-204ENST00000504672 TEX43Q6ZNM6 134 aa5.36□□□□□ -1.55
PDGFC-204ENST00000504672 HIST3H2BBQ8N257 126 aa5.36□□□□□ -1.55
PDGFC-204ENST00000504672 FAM19A2Q8N3H0 131 aa5.36□□□□□ -1.55
PDGFC-204ENST00000504672 IFI27L1Q96BM0 104 aa5.36□□□□□ -1.55
PDGFC-204ENST00000504672 OPRPNQ99935 248 aaPredicted RBP5.36□□□□□ -1.55
PDGFC-204ENST00000504672 VCX2Q9H322 139 aa5.36□□□□□ -1.55
PDGFC-204ENST00000504672 TINCRA0A1B0GVN0 87 aa5.35□□□□□ -1.55
PDGFC-204ENST00000504672 FAM168BA1KXE4 195 aa5.35□□□□□ -1.55
PDGFC-204ENST00000504672 IFITM10A6NMD0 228 aa5.35□□□□□ -1.55
PDGFC-204ENST00000504672 LEPROTL1O95214 131 aa5.35□□□□□ -1.55
PDGFC-204ENST00000504672 IGLC3P0DOY3 106 aa5.35□□□□□ -1.55
PDGFC-204ENST00000504672 SEC11AP67812 179 aa5.35□□□□□ -1.55
PDGFC-204ENST00000504672 RPL18AQ02543 176 aaKnown RBP5.35□□□□□ -1.55
PDGFC-204ENST00000504672 Q6ZN92 141 aa5.35□□□□□ -1.55
PDGFC-204ENST00000504672 RETNLBQ9BQ08 111 aa5.35□□□□□ -1.55
PDGFC-204ENST00000504672 HSPB8Q9UJY1 196 aa5.35□□□□□ -1.55
PDGFC-204ENST00000504672 NDUFA6P56556 154 aa5.34□□□□□ -1.55
PDGFC-204ENST00000504672 SS18Q15532 418 aa5.34□□□□□ -1.55
PDGFC-204ENST00000504672 C2orf88Q9BSF0 95 aa5.34□□□□□ -1.55
PDGFC-204ENST00000504672 RPL13AP40429 203 aaKnown RBP5.33□□□□□ -1.56
PDGFC-204ENST00000504672 HERVK_113P63121 156 aa5.33□□□□□ -1.56
PDGFC-204ENST00000504672 LINC01545Q5VT33 79 aa5.33□□□□□ -1.56
PDGFC-204ENST00000504672 HIST1H2BLQ99880 126 aa5.33□□□□□ -1.56
PDGFC-204ENST00000504672 IGLV5-39A0A0G2JS06 123 aa5.32□□□□□ -1.56
PDGFC-204ENST00000504672 F8VRH5 84 aa5.32□□□□□ -1.56
PDGFC-204ENST00000504672 SYS1-DBNDD2H3BUS1 97 aa5.32□□□□□ -1.56
PDGFC-204ENST00000504672 APOMO95445 188 aa5.32□□□□□ -1.56
PDGFC-204ENST00000504672 RNASE13Q5GAN3 156 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms