RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 LINC00587B1AMM8 73 aa6.89□□□□□ -1.31
TPM3-217ENST00000504663 COX7A2LO14548 114 aa6.89□□□□□ -1.31
TPM3-217ENST00000504663 UBE2DNLQ8IWF7 75 aa6.89□□□□□ -1.31
TPM3-217ENST00000504663 C15orf56Q8N910 161 aa6.89□□□□□ -1.31
TPM3-217ENST00000504663 LITAFQ99732 161 aa6.89□□□□□ -1.31
TPM3-217ENST00000504663 NBDYA0A0U1RRE5 68 aa6.88□□□□□ -1.31
TPM3-217ENST00000504663 PCP4L1A6NKN8 68 aa6.88□□□□□ -1.31
TPM3-217ENST00000504663 ZNF815PA8K554 130 aa6.88□□□□□ -1.31
TPM3-217ENST00000504663 K7EP13 123 aa6.88□□□□□ -1.31
TPM3-217ENST00000504663 NDUFA1O15239 70 aa6.88□□□□□ -1.31
TPM3-217ENST00000504663 Q6ZRN7 208 aaPredicted RBP6.88□□□□□ -1.31
TPM3-217ENST00000504663 COX7B2Q8TF08 81 aa6.88□□□□□ -1.31
TPM3-217ENST00000504663 Q9HAA7 133 aa6.88□□□□□ -1.31
TPM3-217ENST00000504663 A0A0J9YXY3 114 aa6.87□□□□□ -1.31
TPM3-217ENST00000504663 C3orf84H3BNL1 204 aa6.87□□□□□ -1.31
TPM3-217ENST00000504663 LGALS3P17931 250 aaKnown RBP6.87□□□□□ -1.31
TPM3-217ENST00000504663 Q6ZR54 194 aa6.87□□□□□ -1.31
TPM3-217ENST00000504663 LINC00476Q8WZB0 136 aa6.87□□□□□ -1.31
TPM3-217ENST00000504663 HIGD1BQ9P298 99 aa6.87□□□□□ -1.31
TPM3-217ENST00000504663 NDUFA12Q9UI09 145 aa6.87□□□□□ -1.31
TPM3-217ENST00000504663 DNAH5Q8TE73 4624 aa6.87□□□□□ -1.31
TPM3-217ENST00000504663 RYR2Q92736 4967 aa6.86□□□□□ -1.31
TPM3-217ENST00000504663 IGKV2D-24A0A075B6R9 120 aa6.86□□□□□ -1.31
TPM3-217ENST00000504663 LOC100996750A0A140TA64 210 aa6.86□□□□□ -1.31
TPM3-217ENST00000504663 GCSHP23434 173 aa6.86□□□□□ -1.31
TPM3-217ENST00000504663 HNRNPA3P51991 378 aaKnown RBP6.86□□□□□ -1.31
TPM3-217ENST00000504663 Q8IZM0 81 aa6.86□□□□□ -1.31
TPM3-217ENST00000504663 KRTAP4-6Q9BYQ5 205 aa6.86□□□□□ -1.31
TPM3-217ENST00000504663 DNAH8Q96JB1 4490 aa6.86□□□□□ -1.31
TPM3-217ENST00000504663 GVQW2A0A096LPI5 108 aaPredicted RBP6.85□□□□□ -1.31
TPM3-217ENST00000504663 WFDC2Q14508 124 aa6.85□□□□□ -1.31
TPM3-217ENST00000504663 ORAOV1Q8WV07 137 aa6.85□□□□□ -1.31
TPM3-217ENST00000504663 HECTD4Q9Y4D8 3996 aa6.84□□□□□ -1.31
TPM3-217ENST00000504663 CTAG1AP78358 180 aa6.84□□□□□ -1.31
TPM3-217ENST00000504663 SPAG11BQ08648 103 aa6.84□□□□□ -1.31
TPM3-217ENST00000504663 C2orf82Q6UX34 121 aa6.84□□□□□ -1.31
TPM3-217ENST00000504663 C6orf223Q8N319 242 aa6.84□□□□□ -1.31
TPM3-217ENST00000504663 LINC00526Q96FQ7 95 aa6.84□□□□□ -1.31
TPM3-217ENST00000504663 TTC32Q5I0X7 151 aa6.83□□□□□ -1.32
TPM3-217ENST00000504663 ADAMTSL4-AS1Q5T5F5 129 aa6.83□□□□□ -1.32
TPM3-217ENST00000504663 C10orf25Q5T742 122 aa6.83□□□□□ -1.32
TPM3-217ENST00000504663 NTN5Q8WTR8 489 aaPredicted RBP6.83□□□□□ -1.32
TPM3-217ENST00000504663 SPANXB1Q9NS25 103 aaPredicted RBP6.83□□□□□ -1.32
TPM3-217ENST00000504663 TOMM7Q9P0U1 55 aa6.83□□□□□ -1.32
TPM3-217ENST00000504663 PKD1P98161 4303 aa6.82□□□□□ -1.32
TPM3-217ENST00000504663 SLPIP03973 132 aa6.82□□□□□ -1.32
TPM3-217ENST00000504663 KMT2CQ8NEZ4 4911 aaKnown RBP6.82□□□□□ -1.32
TPM3-217ENST00000504663 TIMM17BO60830 172 aa6.81□□□□□ -1.32
TPM3-217ENST00000504663 HSD52Q0P140 79 aa6.81□□□□□ -1.32
TPM3-217ENST00000504663 HIGD2BQ4VC39 106 aa6.81□□□□□ -1.32
TPM3-217ENST00000504663 RMI2Q96E14 147 aa6.81□□□□□ -1.32
TPM3-217ENST00000504663 SNHG12Q9BXW3 62 aa6.81□□□□□ -1.32
TPM3-217ENST00000504663 LRCOL1A6NCL2 159 aa6.8□□□□□ -1.32
TPM3-217ENST00000504663 USP17L23D6RBM5 183 aa6.8□□□□□ -1.32
TPM3-217ENST00000504663 APOMO95445 188 aa6.8□□□□□ -1.32
TPM3-217ENST00000504663 CXCL5P42830 114 aa6.8□□□□□ -1.32
TPM3-217ENST00000504663 HERV-K104P63124 156 aa6.8□□□□□ -1.32
TPM3-217ENST00000504663 BVES-AS1Q5T3Y7 98 aa6.8□□□□□ -1.32
TPM3-217ENST00000504663 SOSTDC1Q6X4U4 206 aa6.8□□□□□ -1.32
TPM3-217ENST00000504663 SPANXDQ9BXN6 97 aa6.8□□□□□ -1.32
TPM3-217ENST00000504663 SPANXCQ9NY87 97 aa6.8□□□□□ -1.32
TPM3-217ENST00000504663 M0R2N4 97 aa6.79□□□□□ -1.32
TPM3-217ENST00000504663 FXYD2P54710 66 aa6.79□□□□□ -1.32
TPM3-217ENST00000504663 TAL2Q16559 108 aa6.79□□□□□ -1.32
TPM3-217ENST00000504663 UNQ6190/PRO20217Q6UXQ8 127 aa6.79□□□□□ -1.32
TPM3-217ENST00000504663 SCGB1D4Q6XE38 83 aa6.79□□□□□ -1.32
TPM3-217ENST00000504663 Q6ZRU5 148 aa6.79□□□□□ -1.32
TPM3-217ENST00000504663 C2orf48Q96LS8 159 aa6.79□□□□□ -1.32
TPM3-217ENST00000504663 TM2D2Q9BX73 214 aa6.79□□□□□ -1.32
TPM3-217ENST00000504663 C6orf48Q9UBA6 75 aa6.79□□□□□ -1.32
TPM3-217ENST00000504663 TRIAP1O43715 76 aa6.78□□□□□ -1.32
TPM3-217ENST00000504663 LY6G6CO95867 125 aa6.78□□□□□ -1.32
TPM3-217ENST00000504663 PRSS2P07478 247 aa6.78□□□□□ -1.32
TPM3-217ENST00000504663 SMIM13P0DJ93 91 aa6.78□□□□□ -1.32
TPM3-217ENST00000504663 HINT1P49773 126 aaPredicted RBP6.78□□□□□ -1.32
TPM3-217ENST00000504663 C9orf116Q5BN46 136 aaPredicted RBP6.78□□□□□ -1.32
TPM3-217ENST00000504663 C6orf226Q5I0X4 101 aa6.78□□□□□ -1.32
TPM3-217ENST00000504663 DAND5Q8N907 189 aa6.78□□□□□ -1.32
TPM3-217ENST00000504663 ERG28Q9UKR5 140 aa6.78□□□□□ -1.32
TPM3-217ENST00000504663 COX11Q9Y6N1 276 aa6.78□□□□□ -1.32
TPM3-217ENST00000504663 LECT2O14960 151 aa6.77□□□□□ -1.33
TPM3-217ENST00000504663 SERTAD4-AS1Q5TG53 156 aa6.77□□□□□ -1.33
TPM3-217ENST00000504663 SFTA2Q6UW10 78 aa6.77□□□□□ -1.33
TPM3-217ENST00000504663 CEND1Q8N111 149 aa6.77□□□□□ -1.33
TPM3-217ENST00000504663 TMEM238C9JI98 176 aa6.76□□□□□ -1.33
TPM3-217ENST00000504663 A0A0U1RRA0 63 aa6.75□□□□□ -1.33
TPM3-217ENST00000504663 A0A1B0GWB2 263 aa6.75□□□□□ -1.33
TPM3-217ENST00000504663 F8WDY8 70 aa6.75□□□□□ -1.33
TPM3-217ENST00000504663 CKS1BP61024 79 aa6.75□□□□□ -1.33
TPM3-217ENST00000504663 RNF151Q2KHN1 245 aa6.75□□□□□ -1.33
TPM3-217ENST00000504663 MEIG1Q5JSS6 88 aa6.75□□□□□ -1.33
TPM3-217ENST00000504663 MIR7-3HGQ8N6C7 128 aa6.75□□□□□ -1.33
TPM3-217ENST00000504663 Q8NDZ9 215 aa6.75□□□□□ -1.33
TPM3-217ENST00000504663 PPDPFQ9H3Y8 114 aa6.75□□□□□ -1.33
TPM3-217ENST00000504663 DYNC1H1Q14204 4646 aaKnown RBP6.75□□□□□ -1.33
TPM3-217ENST00000504663 LOC107984156A0A0G2JMH3 177 aa6.74□□□□□ -1.33
TPM3-217ENST00000504663 TRBV30A0A0K0K1B3 111 aa6.74□□□□□ -1.33
TPM3-217ENST00000504663 M0R143 59 aa6.74□□□□□ -1.33
TPM3-217ENST00000504663 MUSTN1Q8IVN3 82 aa6.74□□□□□ -1.33
TPM3-217ENST00000504663 ARL17AQ8IVW1 177 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms