RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 BIRC6Q9NR09 4857 aa7.67□□□□□ -1.18
PDLIM5-208ENST00000504489 C11orf86A6NJI1 115 aa7.66□□□□□ -1.18
PDLIM5-208ENST00000504489 SMIM1B2RUZ4 78 aa7.66□□□□□ -1.18
PDLIM5-208ENST00000504489 F8VRH5 84 aa7.66□□□□□ -1.18
PDLIM5-208ENST00000504489 ZNF22P17026 224 aaPredicted RBP7.66□□□□□ -1.18
PDLIM5-208ENST00000504489 Q6ZRU5 148 aa7.66□□□□□ -1.18
PDLIM5-208ENST00000504489 Q6ZSA8 131 aa7.66□□□□□ -1.18
PDLIM5-208ENST00000504489 FAM30AQ9NZY2 134 aa7.66□□□□□ -1.18
PDLIM5-208ENST00000504489 NDUFA1O15239 70 aa7.65□□□□□ -1.18
PDLIM5-208ENST00000504489 ODF1Q14990 250 aa7.65□□□□□ -1.18
PDLIM5-208ENST00000504489 RNF151Q2KHN1 245 aa7.65□□□□□ -1.18
PDLIM5-208ENST00000504489 Q8IZM0 81 aa7.65□□□□□ -1.18
PDLIM5-208ENST00000504489 MAP1LC3CQ9BXW4 147 aa7.65□□□□□ -1.18
PDLIM5-208ENST00000504489 MRPL35Q9NZE8 188 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-208ENST00000504489 PRSS2P07478 247 aa7.64□□□□□ -1.19
PDLIM5-208ENST00000504489 SPINK8P0C7L1 97 aa7.64□□□□□ -1.19
PDLIM5-208ENST00000504489 C6orf226Q5I0X4 101 aa7.64□□□□□ -1.19
PDLIM5-208ENST00000504489 TOMM7Q9P0U1 55 aa7.64□□□□□ -1.19
PDLIM5-208ENST00000504489 PKIGQ9Y2B9 76 aa7.64□□□□□ -1.19
PDLIM5-208ENST00000504489 IGLV5-39A0A0G2JS06 123 aa7.63□□□□□ -1.19
PDLIM5-208ENST00000504489 H0Y8G0 127 aa7.63□□□□□ -1.19
PDLIM5-208ENST00000504489 XGP55808 180 aa7.63□□□□□ -1.19
PDLIM5-208ENST00000504489 TMEM170BQ5T4T1 132 aa7.63□□□□□ -1.19
PDLIM5-208ENST00000504489 UNQ6190/PRO20217Q6UXQ8 127 aa7.63□□□□□ -1.19
PDLIM5-208ENST00000504489 DNAH8Q96JB1 4490 aa7.62□□□□□ -1.19
PDLIM5-208ENST00000504489 CKS1BP61024 79 aa7.62□□□□□ -1.19
PDLIM5-208ENST00000504489 KRTAP19-4Q3LI73 84 aa7.62□□□□□ -1.19
PDLIM5-208ENST00000504489 C10orf25Q5T742 122 aa7.62□□□□□ -1.19
PDLIM5-208ENST00000504489 COX7B2Q8TF08 81 aa7.62□□□□□ -1.19
PDLIM5-208ENST00000504489 APOBP04114 4563 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-208ENST00000504489 TRBV30A0A0K0K1B3 111 aa7.61□□□□□ -1.19
PDLIM5-208ENST00000504489 LOC107984640A0A0U1RRK4 108 aa7.61□□□□□ -1.19
PDLIM5-208ENST00000504489 SYS1-DBNDD2H3BUS1 97 aa7.61□□□□□ -1.19
PDLIM5-208ENST00000504489 PLNP26678 52 aa7.61□□□□□ -1.19
PDLIM5-208ENST00000504489 CXCL5P42830 114 aa7.61□□□□□ -1.19
PDLIM5-208ENST00000504489 CIRBPQ14011 172 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-208ENST00000504489 C2orf82Q6UX34 121 aa7.61□□□□□ -1.19
PDLIM5-208ENST00000504489 C6orf48Q9UBA6 75 aa7.61□□□□□ -1.19
PDLIM5-208ENST00000504489 TMEM223A0PJW6 202 aa7.6□□□□□ -1.19
PDLIM5-208ENST00000504489 DPM2O94777 84 aa7.6□□□□□ -1.19
PDLIM5-208ENST00000504489 S100A6P06703 90 aa7.6□□□□□ -1.19
PDLIM5-208ENST00000504489 TLX1NBP0CAT3 122 aa7.6□□□□□ -1.19
PDLIM5-208ENST00000504489 LCE1DQ5T752 114 aa7.6□□□□□ -1.19
PDLIM5-208ENST00000504489 KIAA1109Q2LD37 5005 aa7.6□□□□□ -1.19
PDLIM5-208ENST00000504489 A0A096LNI7 61 aa7.59□□□□□ -1.19
PDLIM5-208ENST00000504489 PANO1I0J062 215 aa7.59□□□□□ -1.19
PDLIM5-208ENST00000504489 C3orf79P0CE67 100 aa7.59□□□□□ -1.19
PDLIM5-208ENST00000504489 CHTF8P0CG12 524 aa7.59□□□□□ -1.19
PDLIM5-208ENST00000504489 PET117Q6UWS5 81 aa7.59□□□□□ -1.19
PDLIM5-208ENST00000504489 HIST3H2BBQ8N257 126 aa7.59□□□□□ -1.19
PDLIM5-208ENST00000504489 HSPG2P98160 4391 aa7.58□□□□□ -1.2
PDLIM5-208ENST00000504489 IGKCP01834 107 aa7.58□□□□□ -1.2
PDLIM5-208ENST00000504489 LINC01545Q5VT33 79 aa7.58□□□□□ -1.2
PDLIM5-208ENST00000504489 SCXQ7RTU7 201 aa7.58□□□□□ -1.2
PDLIM5-208ENST00000504489 SPACA4Q8TDM5 124 aa7.58□□□□□ -1.2
PDLIM5-208ENST00000504489 PMCHL2Q9BQD1 86 aa7.58□□□□□ -1.2
PDLIM5-208ENST00000504489 LINC00474Q9P2X8 69 aa7.58□□□□□ -1.2
PDLIM5-208ENST00000504489 PTTG1IPP53801 180 aa7.57□□□□□ -1.2
PDLIM5-208ENST00000504489 HAMPP81172 84 aa7.57□□□□□ -1.2
PDLIM5-208ENST00000504489 CIRBP-AS1Q8TBR5 109 aa7.57□□□□□ -1.2
PDLIM5-208ENST00000504489 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
PDLIM5-208ENST00000504489 S100A2P29034 98 aa7.56□□□□□ -1.2
PDLIM5-208ENST00000504489 KRTDAPP60985 99 aa7.56□□□□□ -1.2
PDLIM5-208ENST00000504489 GAGE2BQ13066 116 aa7.56□□□□□ -1.2
PDLIM5-208ENST00000504489 C9orf116Q5BN46 136 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-208ENST00000504489 SFTA2Q6UW10 78 aa7.56□□□□□ -1.2
PDLIM5-208ENST00000504489 DPH3Q96FX2 82 aa7.56□□□□□ -1.2
PDLIM5-208ENST00000504489 HIST1H2BLQ99880 126 aa7.56□□□□□ -1.2
PDLIM5-208ENST00000504489 A0A087WYN8 130 aa7.55□□□□□ -1.2
PDLIM5-208ENST00000504489 C5orf52A6NGY3 159 aa7.55□□□□□ -1.2
PDLIM5-208ENST00000504489 NDUFC2-KCTD14E9PQ53 114 aa7.55□□□□□ -1.2
PDLIM5-208ENST00000504489 SNRPEP62304 92 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-208ENST00000504489 RPL18AQ02543 176 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-208ENST00000504489 MAJINQ3KP22 176 aa7.55□□□□□ -1.2
PDLIM5-208ENST00000504489 Q6ZRP5 223 aa7.55□□□□□ -1.2
PDLIM5-208ENST00000504489 PLAC8Q9NZF1 115 aa7.55□□□□□ -1.2
PDLIM5-208ENST00000504489 RYR1P21817 5038 aa7.55□□□□□ -1.2
PDLIM5-208ENST00000504489 HERVK_113P61574 105 aa7.54□□□□□ -1.2
PDLIM5-208ENST00000504489 ZNF625Q96I27 306 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-208ENST00000504489 C20orf202A1L168 122 aa7.53□□□□□ -1.2
PDLIM5-208ENST00000504489 EPM2AB3EWF7 344 aa7.53□□□□□ -1.2
PDLIM5-208ENST00000504489 LEPROTO15243 131 aa7.53□□□□□ -1.2
PDLIM5-208ENST00000504489 STPG4Q8N801 248 aa7.53□□□□□ -1.2
PDLIM5-208ENST00000504489 PLEKHB2Q96CS7 222 aa7.53□□□□□ -1.2
PDLIM5-208ENST00000504489 SMR3BP02814 79 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-208ENST00000504489 AKR1D1P51857 326 aa7.52□□□□□ -1.21
PDLIM5-208ENST00000504489 GAGE2EQ4V326 116 aa7.52□□□□□ -1.21
PDLIM5-208ENST00000504489 Q8N1X5 172 aa7.52□□□□□ -1.21
PDLIM5-208ENST00000504489 GAGE2DQ9UEU5 116 aa7.52□□□□□ -1.21
PDLIM5-208ENST00000504489 E9PLD3 99 aa7.51□□□□□ -1.21
PDLIM5-208ENST00000504489 COX17Q14061 63 aa7.51□□□□□ -1.21
PDLIM5-208ENST00000504489 KRTAP17-1Q9BYP8 105 aa7.51□□□□□ -1.21
PDLIM5-208ENST00000504489 A0A1W2PNN7 141 aa7.5□□□□□ -1.21
PDLIM5-208ENST00000504489 J3QQQ9 107 aa7.5□□□□□ -1.21
PDLIM5-208ENST00000504489 TSPEAR-AS2P59090 65 aa7.5□□□□□ -1.21
PDLIM5-208ENST00000504489 HERV-K104P63124 156 aa7.5□□□□□ -1.21
PDLIM5-208ENST00000504489 NDUFA12Q9UI09 145 aa7.5□□□□□ -1.21
PDLIM5-208ENST00000504489 ERG28Q9UKR5 140 aa7.5□□□□□ -1.21
PDLIM5-208ENST00000504489 MYMXA0A1B0GTQ4 84 aa7.49□□□□□ -1.21
PDLIM5-208ENST00000504489 NMUP48645 174 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms