RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 V9GYY9 64 aa12.49□□□□□ -0.41
POLR2J3-209ENST00000504157 DEFB112Q30KQ8 113 aa12.48□□□□□ -0.41
POLR2J3-209ENST00000504157 TOMM7Q9P0U1 55 aa12.48□□□□□ -0.41
POLR2J3-209ENST00000504157 LINC00474Q9P2X8 69 aa12.48□□□□□ -0.41
POLR2J3-209ENST00000504157 C1orf195Q5TG92 126 aa12.47□□□□□ -0.41
POLR2J3-209ENST00000504157 FASNP49327 2511 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-209ENST00000504157 IGHV4-30-2A0A087WSY4 118 aa12.47□□□□□ -0.41
POLR2J3-209ENST00000504157 B4DSR2 109 aa12.47□□□□□ -0.41
POLR2J3-209ENST00000504157 RBM3P98179 157 aaKnown RBP12.47□□□□□ -0.41
POLR2J3-209ENST00000504157 TRAV10A0A0B4J240 114 aa12.46□□□□□ -0.41
POLR2J3-209ENST00000504157 UBE2L6O14933 153 aa12.46□□□□□ -0.41
POLR2J3-209ENST00000504157 BRK1Q8WUW1 75 aa12.46□□□□□ -0.42
POLR2J3-209ENST00000504157 AKAP6Q13023 2319 aa12.46□□□□□ -0.42
POLR2J3-209ENST00000504157 TRGV1A0A0A0MS02 117 aa12.45□□□□□ -0.42
POLR2J3-209ENST00000504157 SLURP1P55000 103 aa12.45□□□□□ -0.42
POLR2J3-209ENST00000504157 Q6ZTI0 123 aa12.45□□□□□ -0.42
POLR2J3-209ENST00000504157 LINC01547P58512 204 aaPredicted RBP12.45□□□□□ -0.42
POLR2J3-209ENST00000504157 CCL19Q99731 98 aa12.45□□□□□ -0.42
POLR2J3-209ENST00000504157 CELSR2Q9HCU4 2923 aa12.44□□□□□ -0.42
POLR2J3-209ENST00000504157 CENPEQ02224 2701 aa12.44□□□□□ -0.42
POLR2J3-209ENST00000504157 ZNF702PQ9H963 129 aa12.43□□□□□ -0.42
POLR2J3-209ENST00000504157 A0A096LNT2 108 aa12.43□□□□□ -0.42
POLR2J3-209ENST00000504157 Q6ZQT0 140 aa12.43□□□□□ -0.42
POLR2J3-209ENST00000504157 CELSR1Q9NYQ6 3014 aa12.43□□□□□ -0.42
POLR2J3-209ENST00000504157 IGHV3OR16-9A0A0B4J2B5 98 aa12.42□□□□□ -0.42
POLR2J3-209ENST00000504157 C1orf158Q8N1D5 194 aa12.42□□□□□ -0.42
POLR2J3-209ENST00000504157 NANOS2P60321 138 aaKnown RBP12.42□□□□□ -0.42
POLR2J3-209ENST00000504157 LOC110117498A0A087WWA1 95 aa12.41□□□□□ -0.42
POLR2J3-209ENST00000504157 A0A087WZ39 114 aa12.41□□□□□ -0.42
POLR2J3-209ENST00000504157 A0A0U1RQV1 116 aa12.4□□□□□ -0.42
POLR2J3-209ENST00000504157 TRBV7-4A0A0J9YYF1 115 aa12.39□□□□□ -0.43
POLR2J3-209ENST00000504157 CXCL6P80162 114 aa12.39□□□□□ -0.43
POLR2J3-209ENST00000504157 FBN2P35556 2912 aa12.39□□□□□ -0.43
POLR2J3-209ENST00000504157 DEFB114Q30KQ6 69 aa12.39□□□□□ -0.43
POLR2J3-209ENST00000504157 SPG11Q96JI7 2443 aa12.39□□□□□ -0.43
POLR2J3-209ENST00000504157 CSMD2Q7Z408 3487 aa12.38□□□□□ -0.43
POLR2J3-209ENST00000504157 Q6ZVQ6 151 aa12.38□□□□□ -0.43
POLR2J3-209ENST00000504157 DYNLRB2Q8TF09 96 aa12.38□□□□□ -0.43
POLR2J3-209ENST00000504157 DEFB136Q30KP8 78 aa12.38□□□□□ -0.43
POLR2J3-209ENST00000504157 MIFP14174 115 aa12.37□□□□□ -0.43
POLR2J3-209ENST00000504157 A0A1W2PRX2 142 aa12.37□□□□□ -0.43
POLR2J3-209ENST00000504157 HAMPP81172 84 aa12.37□□□□□ -0.43
POLR2J3-209ENST00000504157 C18orf65Q6ZTR6 163 aa12.37□□□□□ -0.43
POLR2J3-209ENST00000504157 NBPF19A0A087WUL8 3843 aa12.36□□□□□ -0.43
POLR2J3-209ENST00000504157 PTPN13Q12923 2485 aa12.36□□□□□ -0.43
POLR2J3-209ENST00000504157 ODF3L2Q3SX64 289 aa12.35□□□□□ -0.43
POLR2J3-209ENST00000504157 C4orf3Q8WVX3 66 aa12.35□□□□□ -0.43
POLR2J3-209ENST00000504157 KRTAP10-9P60411 292 aa12.34□□□□□ -0.43
POLR2J3-209ENST00000504157 STHQ8IWL8 128 aa12.34□□□□□ -0.43
POLR2J3-209ENST00000504157 Q8N3U1 123 aa12.34□□□□□ -0.43
POLR2J3-209ENST00000504157 TM2D3Q9BRN9 247 aa12.34□□□□□ -0.43
POLR2J3-209ENST00000504157 ZNF561-AS1K7EIQ3 104 aa12.34□□□□□ -0.43
POLR2J3-209ENST00000504157 C6orf223Q8N319 242 aa12.34□□□□□ -0.43
POLR2J3-209ENST00000504157 DSCR9P59020 149 aa12.33□□□□□ -0.44
POLR2J3-209ENST00000504157 Q6YL49 198 aa12.33□□□□□ -0.44
POLR2J3-209ENST00000504157 LINC01356Q8N9X3 169 aa12.33□□□□□ -0.44
POLR2J3-209ENST00000504157 ABCA12Q86UK0 2595 aa12.33□□□□□ -0.44
POLR2J3-209ENST00000504157 M0R2N4 97 aa12.33□□□□□ -0.44
POLR2J3-209ENST00000504157 RNASE1P07998 156 aaKnown RBP12.33□□□□□ -0.44
POLR2J3-209ENST00000504157 VPS13CQ709C8 3753 aa12.32□□□□□ -0.44
POLR2J3-209ENST00000504157 IGLV4-60A0A075B6I1 120 aa12.32□□□□□ -0.44
POLR2J3-209ENST00000504157 ERC2-IT1O76042 136 aa12.32□□□□□ -0.44
POLR2J3-209ENST00000504157 C11orf44Q8N8P7 122 aa12.32□□□□□ -0.44
POLR2J3-209ENST00000504157 POLQO75417 2590 aa12.32□□□□□ -0.44
POLR2J3-209ENST00000504157 FAM229BQ4G0N7 80 aa12.31□□□□□ -0.44
POLR2J3-209ENST00000504157 HECTD1Q9ULT8 2610 aa12.31□□□□□ -0.44
POLR2J3-209ENST00000504157 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
POLR2J3-209ENST00000504157 IGKV3OR2-268A0A0C4DH90 116 aa12.3□□□□□ -0.44
POLR2J3-209ENST00000504157 PDE6GP18545 87 aa12.3□□□□□ -0.44
POLR2J3-209ENST00000504157 C6orf226Q5I0X4 101 aa12.3□□□□□ -0.44
POLR2J3-209ENST00000504157 LINC00575Q6W349 94 aa12.3□□□□□ -0.44
POLR2J3-209ENST00000504157 TMEM254Q8TBM7 123 aa12.3□□□□□ -0.44
POLR2J3-209ENST00000504157 C11orf68Q9H3H3 251 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-209ENST00000504157 NOP10Q9NPE3 64 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-209ENST00000504157 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.3□□□□□ -0.447e-8■■■□□ 16.4
POLR2J3-209ENST00000504157 FSHBP01225 129 aa12.29□□□□□ -0.44
POLR2J3-209ENST00000504157 PRR3P79522 188 aaKnown RBP12.29□□□□□ -0.44
POLR2J3-209ENST00000504157 C9orf66Q5T8R8 295 aa12.29□□□□□ -0.44
POLR2J3-209ENST00000504157 APCP25054 2843 aa12.29□□□□□ -0.44
POLR2J3-209ENST00000504157 Q8IZM0 81 aa12.29□□□□□ -0.44
POLR2J3-209ENST00000504157 CREBBPQ92793 2442 aa12.28□□□□□ -0.44
POLR2J3-209ENST00000504157 LOC100131303A0A0U1RQF7 123 aa12.28□□□□□ -0.44
POLR2J3-209ENST00000504157 NREPQ16612 68 aa12.28□□□□□ -0.44
POLR2J3-209ENST00000504157 C16orf74Q96GX8 76 aa12.28□□□□□ -0.44
POLR2J3-209ENST00000504157 LINC00959A0A1B0GUT2 108 aa12.27□□□□□ -0.44
POLR2J3-209ENST00000504157 PLAC8L1A1L4L8 177 aa12.27□□□□□ -0.44
POLR2J3-209ENST00000504157 MPLKIPQ8TAP9 179 aa12.27□□□□□ -0.44
POLR2J3-209ENST00000504157 LAMTOR3Q9UHA4 124 aa12.27□□□□□ -0.45
POLR2J3-209ENST00000504157 C6orf99Q4VX62 202 aa12.26□□□□□ -0.45
POLR2J3-209ENST00000504157 MAP1AP78559 2803 aaPredicted RBP12.26□□□□□ -0.45
POLR2J3-209ENST00000504157 TRGV2A0A075B6R0 118 aa12.25□□□□□ -0.45
POLR2J3-209ENST00000504157 ESRGQ1W209 222 aa12.25□□□□□ -0.45
POLR2J3-209ENST00000504157 ANKRD17O75179 2603 aaKnown RBP12.24□□□□□ -0.45
POLR2J3-209ENST00000504157 UNC79Q9P2D8 2635 aa12.24□□□□□ -0.45
POLR2J3-209ENST00000504157 COX17Q14061 63 aa12.23□□□□□ -0.45
POLR2J3-209ENST00000504157 NAV2Q8IVL1 2488 aa12.22□□□□□ -0.45
POLR2J3-209ENST00000504157 ITPR2Q14571 2701 aa12.22□□□□□ -0.45
POLR2J3-209ENST00000504157 TRGV4A0A0C4DH28 118 aa12.22□□□□□ -0.45
POLR2J3-209ENST00000504157 BPY2O14599 106 aa12.22□□□□□ -0.45
POLR2J3-209ENST00000504157 H3BQ85 93 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms